EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000019754 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: scaffold attachment factor B1-like
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Minus strand
Length: 2715 bases
Position: chrKN980563.1:1260767-1263481
Accession: 105511876
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000005921	RRM_5	PF13893.6	3.8e-07	1	1
ENSCANP00000005921	RRM_1	PF00076.22	4.5e-13	1	1
ENSCANP00000005921	SAP	PF02037.27	1.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000022493	-	2640	XM_011942091	ENSCANP00000005921	879 (aa)	XP_011797481	A0A2K5HNN4

Gene Model

Click here to download ENSCANG00000019754's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000019754's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000019754	-	100	82.671	ENSCANG00000004774	-	86	96.703
ENSCANG00000019754	-	99	65.180	ENSCANG00000024675	SAFB2	94	66.515

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000019754	-	100	92.467	ENSG00000160633	SAFB	100	92.576	Homo_sapiens
ENSCANG00000019754	-	89	43.240	ENSAPOG00000022508	safb	95	41.620	Acanthochromis_polyacanthus
ENSCANG00000019754	-	70	85.423	ENSAMEG00000012254	SAFB	98	86.049	Ailuropoda_melanoleuca
ENSCANG00000019754	-	89	41.697	ENSACIG00000006247	safb	99	42.459	Amphilophus_citrinellus
ENSCANG00000019754	-	90	44.565	ENSAOCG00000006308	safb	97	43.632	Amphiprion_ocellaris
ENSCANG00000019754	-	89	42.724	ENSAPEG00000023342	safb	95	41.124	Amphiprion_percula
ENSCANG00000019754	-	95	41.657	ENSATEG00000004998	safb	95	42.955	Anabas_testudineus
ENSCANG00000019754	-	93	61.954	ENSAPLG00000005780	-	100	61.105	Anas_platyrhynchos
ENSCANG00000019754	-	100	91.823	ENSANAG00000028821	SAFB	100	91.934	Aotus_nancymaae
ENSCANG00000019754	-	93	42.644	ENSACLG00000001926	safb	94	42.758	Astatotilapia_calliptera
ENSCANG00000019754	-	90	40.909	ENSAMXG00000018154	safb	97	43.348	Astyanax_mexicanus
ENSCANG00000019754	-	100	83.097	ENSBTAG00000007875	SAFB	100	83.097	Bos_taurus
ENSCANG00000019754	-	89	88.277	ENSCJAG00000017081	SAFB	100	93.284	Callithrix_jacchus
ENSCANG00000019754	-	100	87.664	ENSCAFG00000018803	SAFB	87	87.664	Canis_familiaris
ENSCANG00000019754	-	100	87.664	ENSCAFG00020018943	SAFB	100	87.664	Canis_lupus_dingo
ENSCANG00000019754	-	100	82.443	ENSCHIG00000007262	SAFB	100	82.443	Capra_hircus
ENSCANG00000019754	-	58	78.517	ENSTSYG00000001851	-	100	77.024	Carlito_syrichta
ENSCANG00000019754	-	93	68.578	ENSCAPG00000012121	SAFB	100	66.972	Cavia_aperea
ENSCANG00000019754	-	100	81.635	ENSCPOG00000026322	SAFB	100	81.423	Cavia_porcellus
ENSCANG00000019754	-	100	92.376	ENSCCAG00000020193	SAFB	100	92.486	Cebus_capucinus
ENSCANG00000019754	-	100	92.686	ENSCATG00000029994	SAFB	100	92.795	Cercocebus_atys
ENSCANG00000019754	-	100	82.391	ENSCLAG00000007734	SAFB	100	83.991	Chinchilla_lanigera
ENSCANG00000019754	-	100	92.576	ENSCSAG00000009949	SAFB	100	92.686	Chlorocebus_sabaeus
ENSCANG00000019754	-	86	88.095	ENSCHOG00000003208	SAFB	93	88.095	Choloepus_hoffmanni
ENSCANG00000019754	-	91	57.449	ENSCPBG00000010936	-	99	58.014	Chrysemys_picta_bellii
ENSCANG00000019754	-	91	61.466	ENSCPBG00000010928	-	99	60.828	Chrysemys_picta_bellii
ENSCANG00000019754	-	100	78.549	ENSCGRG00001002254	Safb	100	78.549	Cricetulus_griseus_chok1gshd
ENSCANG00000019754	-	90	75.601	ENSCGRG00000011529	Safb	96	75.601	Cricetulus_griseus_crigri
ENSCANG00000019754	-	93	42.857	ENSCSEG00000019870	safb	98	42.036	Cynoglossus_semilaevis
ENSCANG00000019754	-	93	40.506	ENSCVAG00000002226	safb	97	39.771	Cyprinodon_variegatus
ENSCANG00000019754	-	92	39.889	ENSDARG00000020467	safb	94	43.195	Danio_rerio
ENSCANG00000019754	-	100	86.057	ENSDNOG00000015746	SAFB	95	85.823	Dasypus_novemcinctus
ENSCANG00000019754	-	100	75.053	ENSDORG00000016200	Safb	100	78.427	Dipodomys_ordii
ENSCANG00000019754	-	71	80.435	ENSETEG00000018679	SAFB	80	81.720	Echinops_telfairi
ENSCANG00000019754	-	100	83.080	ENSEASG00005023019	SAFB	100	83.514	Equus_asinus_asinus
ENSCANG00000019754	-	100	85.371	ENSECAG00000018659	SAFB	89	85.371	Equus_caballus
ENSCANG00000019754	-	93	41.321	ENSELUG00000022327	safb	97	42.632	Esox_lucius
ENSCANG00000019754	-	100	87.255	ENSFCAG00000011835	SAFB	100	87.255	Felis_catus
ENSCANG00000019754	-	99	61.613	ENSFALG00000013882	-	89	61.376	Ficedula_albicollis
ENSCANG00000019754	-	57	55.714	ENSFALG00000013881	-	99	57.770	Ficedula_albicollis
ENSCANG00000019754	-	100	71.351	ENSFDAG00000020306	SAFB	100	70.054	Fukomys_damarensis
ENSCANG00000019754	-	93	38.702	ENSFHEG00000004219	safb	94	40.904	Fundulus_heteroclitus
ENSCANG00000019754	-	55	45.677	ENSGMOG00000014280	safb	94	39.863	Gadus_morhua
ENSCANG00000019754	-	99	61.123	ENSGALG00000013365	-	97	61.513	Gallus_gallus
ENSCANG00000019754	-	93	36.877	ENSGAFG00000016162	safb	94	39.290	Gambusia_affinis
ENSCANG00000019754	-	95	40.879	ENSGACG00000011385	safb	98	40.292	Gasterosteus_aculeatus
ENSCANG00000019754	-	73	57.333	ENSGAGG00000017702	-	100	56.677	Gopherus_agassizii
ENSCANG00000019754	-	95	59.243	ENSGAGG00000008424	-	97	59.956	Gopherus_agassizii
ENSCANG00000019754	-	100	92.249	ENSGGOG00000015109	SAFB	100	92.358	Gorilla_gorilla
ENSCANG00000019754	-	93	39.835	ENSHBUG00000009218	safb	97	42.149	Haplochromis_burtoni
ENSCANG00000019754	-	100	85.086	ENSHGLG00000015883	SAFB	100	85.086	Heterocephalus_glaber_female
ENSCANG00000019754	-	89	35.986	ENSHCOG00000001705	safb	96	39.401	Hippocampus_comes
ENSCANG00000019754	-	93	41.505	ENSIPUG00000024869	safb2	95	43.488	Ictalurus_punctatus
ENSCANG00000019754	-	93	84.793	ENSSTOG00000002783	SAFB	100	84.793	Ictidomys_tridecemlineatus
ENSCANG00000019754	-	100	79.872	ENSJJAG00000009021	Safb	98	80.765	Jaculus_jaculus
ENSCANG00000019754	-	89	42.687	ENSKMAG00000022308	safb	98	41.383	Kryptolebias_marmoratus
ENSCANG00000019754	-	93	41.676	ENSLBEG00000006015	safb	98	42.394	Labrus_bergylta
ENSCANG00000019754	-	63	52.269	ENSLACG00000018090	SAFB	95	51.429	Latimeria_chalumnae
ENSCANG00000019754	-	97	45.415	ENSLOCG00000003613	safb	99	47.013	Lepisosteus_oculatus
ENSCANG00000019754	-	99	84.113	ENSLAFG00000003840	SAFB	100	84.331	Loxodonta_africana
ENSCANG00000019754	-	100	92.585	ENSMFAG00000003885	SAFB	100	92.694	Macaca_fascicularis
ENSCANG00000019754	-	100	92.928	ENSMMUG00000017970	SAFB	100	93.039	Macaca_mulatta
ENSCANG00000019754	-	100	91.010	ENSMNEG00000035637	SAFB	100	91.121	Macaca_nemestrina
ENSCANG00000019754	-	100	88.177	ENSMLEG00000038637	SAFB	100	88.287	Mandrillus_leucophaeus
ENSCANG00000019754	-	92	40.406	ENSMAMG00000003357	safb	89	41.243	Mastacembelus_armatus
ENSCANG00000019754	-	93	42.759	ENSMZEG00005009120	safb	95	42.088	Maylandia_zebra
ENSCANG00000019754	-	97	60.356	ENSMGAG00000001101	-	100	59.755	Meleagris_gallopavo
ENSCANG00000019754	-	89	55.664	ENSMGAG00000001051	-	96	58.438	Meleagris_gallopavo
ENSCANG00000019754	-	53	85.010	ENSMAUG00000005013	Safb	100	85.010	Mesocricetus_auratus
ENSCANG00000019754	-	100	85.512	ENSMICG00000008739	-	100	85.948	Microcebus_murinus
ENSCANG00000019754	-	85	77.448	ENSMICG00000046795	-	96	90.217	Microcebus_murinus
ENSCANG00000019754	-	100	78.594	ENSMOCG00000014040	Safb	100	78.594	Microtus_ochrogaster
ENSCANG00000019754	-	100	69.542	ENSMODG00000001236	SAFB	98	70.883	Monodelphis_domestica
ENSCANG00000019754	-	92	41.516	ENSMALG00000020330	safb	98	41.781	Monopterus_albus
ENSCANG00000019754	-	100	78.998	MGP_CAROLIEiJ_G0021780	Safb	100	78.998	Mus_caroli
ENSCANG00000019754	-	100	79.104	ENSMUSG00000071054	Safb	100	79.104	Mus_musculus
ENSCANG00000019754	-	100	78.914	MGP_PahariEiJ_G0020769	Safb	100	78.914	Mus_pahari
ENSCANG00000019754	-	100	86.819	ENSMPUG00000006123	SAFB	94	86.819	Mustela_putorius_furo
ENSCANG00000019754	-	100	85.294	ENSMLUG00000001081	SAFB	100	85.294	Myotis_lucifugus
ENSCANG00000019754	-	100	76.776	ENSNGAG00000019882	Safb	100	76.776	Nannospalax_galili
ENSCANG00000019754	-	99	89.868	ENSNLEG00000013551	SAFB	100	92.597	Nomascus_leucogenys
ENSCANG00000019754	-	88	78.448	ENSOPRG00000011561	-	100	79.926	Ochotona_princeps
ENSCANG00000019754	-	100	84.525	ENSODEG00000014838	SAFB	100	84.525	Octodon_degus
ENSCANG00000019754	-	93	42.614	ENSONIG00000002318	safb	98	42.938	Oreochromis_niloticus
ENSCANG00000019754	-	90	77.108	ENSOCUG00000014628	SAFB	100	75.870	Oryctolagus_cuniculus
ENSCANG00000019754	-	89	40.534	ENSORLG00000016989	safb	98	40.293	Oryzias_latipes
ENSCANG00000019754	-	90	39.882	ENSORLG00020000404	safb	97	41.274	Oryzias_latipes_hni
ENSCANG00000019754	-	93	40.378	ENSORLG00015010733	safb	94	40.297	Oryzias_latipes_hsok
ENSCANG00000019754	-	92	39.198	ENSOMEG00000009066	safb	98	40.337	Oryzias_melastigma
ENSCANG00000019754	-	100	85.109	ENSOGAG00000027769	SAFB	100	84.707	Otolemur_garnettii
ENSCANG00000019754	-	100	79.630	ENSOARG00000007662	-	100	79.869	Ovis_aries
ENSCANG00000019754	-	78	77.415	ENSOARG00000007856	-	100	77.451	Ovis_aries
ENSCANG00000019754	-	100	92.257	ENSPPAG00000035129	SAFB	100	92.366	Pan_paniscus
ENSCANG00000019754	-	100	87.255	ENSPPRG00000017197	SAFB	100	87.255	Panthera_pardus
ENSCANG00000019754	-	100	92.257	ENSPTRG00000010335	SAFB	100	92.366	Pan_troglodytes
ENSCANG00000019754	-	100	92.475	ENSPANG00000007770	SAFB	100	92.585	Papio_anubis
ENSCANG00000019754	-	94	41.164	ENSPKIG00000009902	safb	95	44.653	Paramormyrops_kingsleyae
ENSCANG00000019754	-	99	57.550	ENSPSIG00000011679	-	99	59.774	Pelodiscus_sinensis
ENSCANG00000019754	-	99	58.508	ENSPSIG00000009367	-	97	57.019	Pelodiscus_sinensis
ENSCANG00000019754	-	100	79.082	ENSPEMG00000020428	Safb	100	79.082	Peromyscus_maniculatus_bairdii
ENSCANG00000019754	-	58	76.384	ENSPCIG00000009504	-	99	77.555	Phascolarctos_cinereus
ENSCANG00000019754	-	93	38.902	ENSPFOG00000007745	safb	99	41.141	Poecilia_formosa
ENSCANG00000019754	-	93	37.363	ENSPLAG00000001614	safb	94	39.274	Poecilia_latipinna
ENSCANG00000019754	-	93	38.787	ENSPMEG00000021023	safb	98	40.788	Poecilia_mexicana
ENSCANG00000019754	-	93	37.853	ENSPREG00000012496	safb	94	40.452	Poecilia_reticulata
ENSCANG00000019754	-	100	92.779	ENSPPYG00000009428	SAFB	100	92.888	Pongo_abelii
ENSCANG00000019754	-	100	80.890	ENSPCAG00000006475	SAFB	100	81.216	Procavia_capensis
ENSCANG00000019754	-	100	82.845	ENSPCOG00000014090	SAFB	100	81.868	Propithecus_coquereli
ENSCANG00000019754	-	100	78.844	ENSPVAG00000004913	SAFB	100	79.171	Pteropus_vampyrus
ENSCANG00000019754	-	95	42.809	ENSPNAG00000021838	safb	97	43.581	Pygocentrus_nattereri
ENSCANG00000019754	-	100	79.065	ENSRNOG00000050543	Safb	100	79.596	Rattus_norvegicus
ENSCANG00000019754	-	100	80.244	ENSRBIG00000042509	SAFB	86	96.703	Rhinopithecus_bieti
ENSCANG00000019754	-	100	92.694	ENSRROG00000029278	SAFB	100	92.803	Rhinopithecus_roxellana
ENSCANG00000019754	-	100	92.140	ENSSBOG00000026291	SAFB	100	92.249	Saimiri_boliviensis_boliviensis
ENSCANG00000019754	-	64	44.224	ENSSFOG00015008156	safb	95	44.878	Scleropages_formosus
ENSCANG00000019754	-	93	40.180	ENSSMAG00000009316	safb	98	40.741	Scophthalmus_maximus
ENSCANG00000019754	-	93	40.433	ENSSDUG00000009652	safb	97	42.940	Seriola_dumerili
ENSCANG00000019754	-	95	41.247	ENSSLDG00000001670	safb	95	40.832	Seriola_lalandi_dorsalis
ENSCANG00000019754	-	93	78.898	ENSSARG00000010475	SAFB	100	79.250	Sorex_araneus
ENSCANG00000019754	-	52	54.070	ENSSPUG00000009820	-	99	58.281	Sphenodon_punctatus
ENSCANG00000019754	-	57	57.312	ENSSPUG00000009747	-	99	55.875	Sphenodon_punctatus
ENSCANG00000019754	-	92	41.253	ENSSPAG00000015682	safb	97	41.032	Stegastes_partitus
ENSCANG00000019754	-	100	86.947	ENSSSCG00000013522	SAFB	99	87.789	Sus_scrofa
ENSCANG00000019754	-	96	61.298	ENSTGUG00000000502	-	97	61.521	Taeniopygia_guttata
ENSCANG00000019754	-	66	56.888	ENSTGUG00000000489	-	96	61.157	Taeniopygia_guttata
ENSCANG00000019754	-	89	40.947	ENSTRUG00000003567	safb	98	41.582	Takifugu_rubripes
ENSCANG00000019754	-	87	42.527	ENSTNIG00000015470	safb	99	42.424	Tetraodon_nigroviridis
ENSCANG00000019754	-	74	72.932	ENSTBEG00000013124	-	66	84.127	Tupaia_belangeri
ENSCANG00000019754	-	92	93.651	ENSTTRG00000013588	SAFB	92	93.651	Tursiops_truncatus
ENSCANG00000019754	-	78	87.960	ENSUAMG00000024543	SAFB	100	81.378	Ursus_americanus
ENSCANG00000019754	-	89	87.646	ENSUMAG00000009734	SAFB	97	87.809	Ursus_maritimus
ENSCANG00000019754	-	72	89.844	ENSVPAG00000012043	SAFB	79	89.844	Vicugna_pacos
ENSCANG00000019754	-	100	87.364	ENSVVUG00000013720	SAFB	87	87.364	Vulpes_vulpes
ENSCANG00000019754	-	66	48.764	ENSXETG00000008755	safb	97	50.883	Xenopus_tropicalis
ENSCANG00000019754	-	93	38.558	ENSXMAG00000003458	safb	94	40.550	Xiphophorus_maculatus