EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000019997 (Gene tree)
Gene ID: 105516766
Gene Symbol: RBM47
Alias: FLJ20273|NET18
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 42319 bases
Position: chrKN981490.1:2737381-2779699
Accession: 105516766
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000005976	RRM_1	PF00076.22	1.3e-38	1	3
ENSCANP00000005976	RRM_1	PF00076.22	1.3e-38	2	3
ENSCANP00000005976	RRM_1	PF00076.22	1.3e-38	3	3
ENSCANP00000005962	RRM_1	PF00076.22	4e-38	1	3
ENSCANP00000005962	RRM_1	PF00076.22	4e-38	2	3
ENSCANP00000005962	RRM_1	PF00076.22	4e-38	3	3
ENSCANP00000005973	RRM_1	PF00076.22	6.3e-38	1	3
ENSCANP00000005973	RRM_1	PF00076.22	6.3e-38	2	3
ENSCANP00000005973	RRM_1	PF00076.22	6.3e-38	3	3
ENSCANP00000005955	RRM_1	PF00076.22	6.4e-38	1	3
ENSCANP00000005955	RRM_1	PF00076.22	6.4e-38	2	3
ENSCANP00000005955	RRM_1	PF00076.22	6.4e-38	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000022662	RBM47-203	1764	-	ENSCANP00000005973	587 (aa)	-	A0A2K5HNQ0
ENSCANT00000022665	RBM47-204	1182	-	ENSCANP00000005976	393 (aa)	-	A0A2K5HNT3
ENSCANT00000022617	RBM47-201	4592	XM_011949067	ENSCANP00000005955	593 (aa)	XP_011804457	A0A2K5HNN3
ENSCANT00000022649	RBM47-202	4229	XM_011949070	ENSCANP00000005962	524 (aa)	XP_011804460	A0A2K5HNN0

Gene Model

Click here to download ENSCANG00000019997's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000019997's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000019997	RBM47	87	68.588	ENSCANG00000038032	A1CF	74	58.850
ENSCANG00000019997	RBM47	77	55.049	ENSCANG00000026351	SYNCRIP	73	57.692
ENSCANG00000019997	RBM47	80	56.013	ENSCANG00000026442	HNRNPR	71	46.256
ENSCANG00000019997	RBM47	76	74.667	ENSCANG00000039065	RBM46	64	74.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000019997	RBM47	100	99.663	ENSG00000163694	RBM47	100	100.000	Homo_sapiens
ENSCANG00000019997	RBM47	100	84.309	ENSAPOG00000011062	rbm47	100	82.540	Acanthochromis_polyacanthus
ENSCANG00000019997	RBM47	100	97.867	ENSAMEG00000009672	RBM47	100	96.309	Ailuropoda_melanoleuca
ENSCANG00000019997	RBM47	100	84.840	ENSACIG00000011531	rbm47	100	83.069	Amphilophus_citrinellus
ENSCANG00000019997	RBM47	100	84.309	ENSAOCG00000022245	rbm47	100	82.540	Amphiprion_ocellaris
ENSCANG00000019997	RBM47	100	81.633	ENSAPEG00000018304	rbm47	100	82.540	Amphiprion_percula
ENSCANG00000019997	RBM47	100	82.564	ENSATEG00000018400	rbm47	94	86.236	Anabas_testudineus
ENSCANG00000019997	RBM47	100	88.423	ENSAPLG00000013974	RBM47	100	88.087	Anas_platyrhynchos
ENSCANG00000019997	RBM47	100	86.167	ENSACAG00000011833	RBM47	100	86.000	Anolis_carolinensis
ENSCANG00000019997	RBM47	100	98.664	ENSANAG00000029440	RBM47	100	98.664	Aotus_nancymaae
ENSCANG00000019997	RBM47	100	82.732	ENSACLG00000016902	rbm47	95	86.197	Astatotilapia_calliptera
ENSCANG00000019997	RBM47	100	75.947	ENSAMXG00000021794	rbm47	95	83.799	Astyanax_mexicanus
ENSCANG00000019997	RBM47	100	96.954	ENSBTAG00000002356	RBM47	100	96.954	Bos_taurus
ENSCANG00000019997	RBM47	100	98.476	ENSCJAG00000019385	RBM47	100	98.476	Callithrix_jacchus
ENSCANG00000019997	RBM47	96	93.007	ENSCAFG00000015898	RBM47	100	93.289	Canis_familiaris
ENSCANG00000019997	RBM47	90	94.334	ENSCAFG00020010558	RBM47	94	94.430	Canis_lupus_dingo
ENSCANG00000019997	RBM47	100	97.293	ENSCHIG00000026214	RBM47	100	97.293	Capra_hircus
ENSCANG00000019997	RBM47	90	84.553	ENSTSYG00000033612	RBM47	93	80.354	Carlito_syrichta
ENSCANG00000019997	RBM47	100	87.731	ENSCAPG00000008426	RBM47	100	88.235	Cavia_aperea
ENSCANG00000019997	RBM47	100	97.067	ENSCPOG00000014100	RBM47	100	95.270	Cavia_porcellus
ENSCANG00000019997	RBM47	100	98.667	ENSCCAG00000030129	-	100	98.667	Cebus_capucinus
ENSCANG00000019997	RBM47	99	68.644	ENSCCAG00000024397	-	99	67.966	Cebus_capucinus
ENSCANG00000019997	RBM47	100	99.831	ENSCATG00000042064	RBM47	100	99.831	Cercocebus_atys
ENSCANG00000019997	RBM47	100	96.533	ENSCLAG00000001684	RBM47	100	95.570	Chinchilla_lanigera
ENSCANG00000019997	RBM47	100	99.831	ENSCSAG00000017060	RBM47	100	99.831	Chlorocebus_sabaeus
ENSCANG00000019997	RBM47	87	97.674	ENSCHOG00000011731	RBM47	88	93.671	Choloepus_hoffmanni
ENSCANG00000019997	RBM47	100	93.085	ENSCPBG00000013831	RBM47	100	90.268	Chrysemys_picta_bellii
ENSCANG00000019997	RBM47	100	94.180	ENSCGRG00001000623	-	100	93.121	Cricetulus_griseus_chok1gshd
ENSCANG00000019997	RBM47	100	87.689	ENSCGRG00001020102	-	100	87.689	Cricetulus_griseus_chok1gshd
ENSCANG00000019997	RBM47	100	93.651	ENSCGRG00000007762	-	100	94.937	Cricetulus_griseus_crigri
ENSCANG00000019997	RBM47	100	87.311	ENSCGRG00000014760	-	100	87.311	Cricetulus_griseus_crigri
ENSCANG00000019997	RBM47	95	82.804	ENSCSEG00000004545	rbm47	100	74.329	Cynoglossus_semilaevis
ENSCANG00000019997	RBM47	98	83.880	ENSCVAG00000020144	rbm47	100	82.275	Cyprinodon_variegatus
ENSCANG00000019997	RBM47	96	81.122	ENSDARG00000061985	rbm47	95	78.709	Danio_rerio
ENSCANG00000019997	RBM47	100	93.548	ENSDNOG00000046854	RBM47	100	95.586	Dasypus_novemcinctus
ENSCANG00000019997	RBM47	100	94.314	ENSDORG00000010144	Rbm47	100	94.649	Dipodomys_ordii
ENSCANG00000019997	RBM47	100	94.631	ENSETEG00000009194	RBM47	100	94.631	Echinops_telfairi
ENSCANG00000019997	RBM47	95	70.667	ENSEBUG00000011912	rbm47	95	75.145	Eptatretus_burgeri
ENSCANG00000019997	RBM47	100	97.293	ENSEASG00005008443	RBM47	100	97.293	Equus_asinus_asinus
ENSCANG00000019997	RBM47	100	97.293	ENSECAG00000004400	RBM47	100	97.293	Equus_caballus
ENSCANG00000019997	RBM47	76	96.537	ENSEEUG00000001194	RBM47	75	96.537	Erinaceus_europaeus
ENSCANG00000019997	RBM47	99	82.759	ENSELUG00000006148	rbm47	93	85.237	Esox_lucius
ENSCANG00000019997	RBM47	100	97.114	ENSFCAG00000012399	RBM47	100	97.114	Felis_catus
ENSCANG00000019997	RBM47	100	90.117	ENSFALG00000002861	RBM47	100	91.122	Ficedula_albicollis
ENSCANG00000019997	RBM47	100	94.400	ENSFDAG00000016326	RBM47	100	93.390	Fukomys_damarensis
ENSCANG00000019997	RBM47	96	87.042	ENSFHEG00000007938	rbm47	100	75.589	Fundulus_heteroclitus
ENSCANG00000019997	RBM47	100	81.013	ENSGMOG00000014802	rbm47	94	84.358	Gadus_morhua
ENSCANG00000019997	RBM47	95	92.287	ENSGALG00000014267	RBM47	99	92.287	Gallus_gallus
ENSCANG00000019997	RBM47	96	82.632	ENSGAFG00000020571	rbm47	98	81.915	Gambusia_affinis
ENSCANG00000019997	RBM47	100	79.744	ENSGACG00000016223	rbm47	94	83.146	Gasterosteus_aculeatus
ENSCANG00000019997	RBM47	100	90.436	ENSGAGG00000020051	RBM47	100	90.436	Gopherus_agassizii
ENSCANG00000019997	RBM47	100	99.831	ENSGGOG00000001367	RBM47	100	99.831	Gorilla_gorilla
ENSCANG00000019997	RBM47	100	82.732	ENSHBUG00000003520	rbm47	95	86.197	Haplochromis_burtoni
ENSCANG00000019997	RBM47	100	74.857	ENSHGLG00000016914	RBM47	100	96.203	Heterocephalus_glaber_female
ENSCANG00000019997	RBM47	95	90.133	ENSHGLG00100003071	-	100	84.068	Heterocephalus_glaber_male
ENSCANG00000019997	RBM47	100	94.241	ENSHGLG00100014028	-	100	96.203	Heterocephalus_glaber_male
ENSCANG00000019997	RBM47	95	84.043	ENSHCOG00000002074	rbm47	99	81.481	Hippocampus_comes
ENSCANG00000019997	RBM47	100	80.829	ENSIPUG00000004743	rbm47	97	84.659	Ictalurus_punctatus
ENSCANG00000019997	RBM47	100	96.768	ENSSTOG00000004727	RBM47	100	96.768	Ictidomys_tridecemlineatus
ENSCANG00000019997	RBM47	100	93.624	ENSJJAG00000013823	Rbm47	100	94.631	Jaculus_jaculus
ENSCANG00000019997	RBM47	100	84.433	ENSKMAG00000000084	rbm47	100	81.890	Kryptolebias_marmoratus
ENSCANG00000019997	RBM47	100	82.447	ENSLBEG00000008436	rbm47	100	80.319	Labrus_bergylta
ENSCANG00000019997	RBM47	100	88.298	ENSLACG00000007196	RBM47	100	85.642	Latimeria_chalumnae
ENSCANG00000019997	RBM47	100	82.910	ENSLOCG00000012966	rbm47	95	85.372	Lepisosteus_oculatus
ENSCANG00000019997	RBM47	100	96.800	ENSLAFG00000011998	RBM47	100	94.790	Loxodonta_africana
ENSCANG00000019997	RBM47	100	99.831	ENSMFAG00000037967	RBM47	100	99.831	Macaca_fascicularis
ENSCANG00000019997	RBM47	100	99.831	ENSMMUG00000012036	RBM47	100	100.000	Macaca_mulatta
ENSCANG00000019997	RBM47	100	99.663	ENSMNEG00000040774	RBM47	100	99.663	Macaca_nemestrina
ENSCANG00000019997	RBM47	100	100.000	ENSMLEG00000041432	RBM47	100	100.000	Mandrillus_leucophaeus
ENSCANG00000019997	RBM47	100	83.033	ENSMAMG00000019143	rbm47	95	86.236	Mastacembelus_armatus
ENSCANG00000019997	RBM47	100	82.732	ENSMZEG00005023659	rbm47	95	86.197	Maylandia_zebra
ENSCANG00000019997	RBM47	100	90.833	ENSMGAG00000012226	RBM47	100	90.333	Meleagris_gallopavo
ENSCANG00000019997	RBM47	100	93.456	ENSMAUG00000006493	Rbm47	100	94.937	Mesocricetus_auratus
ENSCANG00000019997	RBM47	100	90.460	ENSMICG00000026417	RBM47	100	91.993	Microcebus_murinus
ENSCANG00000019997	RBM47	100	93.950	ENSMOCG00000021170	Rbm47	100	95.570	Microtus_ochrogaster
ENSCANG00000019997	RBM47	100	81.137	ENSMMOG00000007260	rbm47	95	83.708	Mola_mola
ENSCANG00000019997	RBM47	79	81.073	ENSMODG00000015426	-	98	78.797	Monodelphis_domestica
ENSCANG00000019997	RBM47	100	92.800	ENSMODG00000007003	RBM47	100	91.246	Monodelphis_domestica
ENSCANG00000019997	RBM47	100	81.980	ENSMODG00000020561	-	97	82.892	Monodelphis_domestica
ENSCANG00000019997	RBM47	100	83.245	ENSMALG00000005167	rbm47	100	82.540	Monopterus_albus
ENSCANG00000019997	RBM47	100	93.445	MGP_CAROLIEiJ_G0027258	Rbm47	100	93.950	Mus_caroli
ENSCANG00000019997	RBM47	100	93.782	ENSMUSG00000070780	Rbm47	100	94.286	Mus_musculus
ENSCANG00000019997	RBM47	100	93.782	MGP_PahariEiJ_G0017040	Rbm47	100	94.304	Mus_pahari
ENSCANG00000019997	RBM47	100	93.729	MGP_SPRETEiJ_G0028253	Rbm47	100	94.237	Mus_spretus
ENSCANG00000019997	RBM47	100	97.475	ENSMPUG00000006177	RBM47	94	97.475	Mustela_putorius_furo
ENSCANG00000019997	RBM47	100	93.232	ENSMLUG00000000889	RBM47	100	93.570	Myotis_lucifugus
ENSCANG00000019997	RBM47	100	94.118	ENSNGAG00000003325	Rbm47	100	94.622	Nannospalax_galili
ENSCANG00000019997	RBM47	100	82.946	ENSNBRG00000015092	rbm47	95	85.994	Neolamprologus_brichardi
ENSCANG00000019997	RBM47	100	99.494	ENSNLEG00000017151	RBM47	100	99.494	Nomascus_leucogenys
ENSCANG00000019997	RBM47	91	93.855	ENSMEUG00000009516	-	99	87.264	Notamacropus_eugenii
ENSCANG00000019997	RBM47	85	97.083	ENSOPRG00000016507	-	75	97.083	Ochotona_princeps
ENSCANG00000019997	RBM47	100	96.533	ENSODEG00000004873	RBM47	100	94.924	Octodon_degus
ENSCANG00000019997	RBM47	100	81.795	ENSONIG00000009061	rbm47	94	85.434	Oreochromis_niloticus
ENSCANG00000019997	RBM47	100	86.891	ENSOANG00000008978	RBM47	100	87.899	Ornithorhynchus_anatinus
ENSCANG00000019997	RBM47	100	95.431	ENSOCUG00000012034	RBM47	100	95.431	Oryctolagus_cuniculus
ENSCANG00000019997	RBM47	100	84.574	ENSORLG00000005847	rbm47	100	81.746	Oryzias_latipes
ENSCANG00000019997	RBM47	100	84.574	ENSORLG00020005154	rbm47	100	81.746	Oryzias_latipes_hni
ENSCANG00000019997	RBM47	100	84.840	ENSORLG00015000066	rbm47	100	82.011	Oryzias_latipes_hsok
ENSCANG00000019997	RBM47	100	84.574	ENSOMEG00000010730	rbm47	100	82.011	Oryzias_melastigma
ENSCANG00000019997	RBM47	100	97.306	ENSOGAG00000029367	-	100	97.306	Otolemur_garnettii
ENSCANG00000019997	RBM47	100	89.867	ENSOGAG00000025193	-	100	87.946	Otolemur_garnettii
ENSCANG00000019997	RBM47	100	93.421	ENSOARG00000012711	RBM47	100	88.610	Ovis_aries
ENSCANG00000019997	RBM47	100	99.663	ENSPPAG00000029763	RBM47	100	99.663	Pan_paniscus
ENSCANG00000019997	RBM47	100	94.058	ENSPPRG00000012873	RBM47	100	94.058	Panthera_pardus
ENSCANG00000019997	RBM47	85	91.784	ENSPTIG00000017046	RBM47	100	91.182	Panthera_tigris_altaica
ENSCANG00000019997	RBM47	100	99.831	ENSPTRG00000016006	RBM47	100	99.831	Pan_troglodytes
ENSCANG00000019997	RBM47	100	99.831	ENSPANG00000005980	RBM47	100	99.831	Papio_anubis
ENSCANG00000019997	RBM47	90	85.552	ENSPKIG00000005037	rbm47	95	84.225	Paramormyrops_kingsleyae
ENSCANG00000019997	RBM47	99	80.867	ENSPKIG00000013431	RBM47	92	86.119	Paramormyrops_kingsleyae
ENSCANG00000019997	RBM47	95	92.819	ENSPSIG00000017516	RBM47	97	90.909	Pelodiscus_sinensis
ENSCANG00000019997	RBM47	95	83.422	ENSPMGG00000018540	rbm47	100	81.383	Periophthalmus_magnuspinnatus
ENSCANG00000019997	RBM47	100	94.118	ENSPEMG00000011088	Rbm47	100	94.622	Peromyscus_maniculatus_bairdii
ENSCANG00000019997	RBM47	91	86.034	ENSPFOG00000007997	rbm47	94	84.637	Poecilia_formosa
ENSCANG00000019997	RBM47	95	83.245	ENSPLAG00000002072	rbm47	100	81.649	Poecilia_latipinna
ENSCANG00000019997	RBM47	96	86.761	ENSPMEG00000017492	rbm47	100	81.481	Poecilia_mexicana
ENSCANG00000019997	RBM47	96	86.761	ENSPREG00000008456	rbm47	100	81.915	Poecilia_reticulata
ENSCANG00000019997	RBM47	98	85.763	ENSPPYG00000014688	RBM47	98	84.509	Pongo_abelii
ENSCANG00000019997	RBM47	96	97.354	ENSPCAG00000011879	RBM47	81	97.500	Procavia_capensis
ENSCANG00000019997	RBM47	100	92.869	ENSPCOG00000023451	RBM47	100	93.548	Propithecus_coquereli
ENSCANG00000019997	RBM47	100	95.638	ENSPVAG00000003812	RBM47	100	95.638	Pteropus_vampyrus
ENSCANG00000019997	RBM47	100	82.732	ENSPNYG00000022868	rbm47	95	85.714	Pundamilia_nyererei
ENSCANG00000019997	RBM47	100	76.936	ENSPNAG00000007940	rbm47	95	84.916	Pygocentrus_nattereri
ENSCANG00000019997	RBM47	100	93.782	ENSRNOG00000002408	Rbm47	100	94.286	Rattus_norvegicus
ENSCANG00000019997	RBM47	100	99.831	ENSRBIG00000039601	RBM47	100	99.831	Rhinopithecus_bieti
ENSCANG00000019997	RBM47	100	99.831	ENSRROG00000044696	RBM47	100	99.831	Rhinopithecus_roxellana
ENSCANG00000019997	RBM47	100	96.947	ENSSBOG00000028475	RBM47	100	98.344	Saimiri_boliviensis_boliviensis
ENSCANG00000019997	RBM47	100	93.067	ENSSHAG00000017576	RBM47	100	92.203	Sarcophilus_harrisii
ENSCANG00000019997	RBM47	98	78.238	ENSSFOG00015024101	RBM47	97	81.742	Scleropages_formosus
ENSCANG00000019997	RBM47	96	81.026	ENSSFOG00015012445	rbm47	94	84.034	Scleropages_formosus
ENSCANG00000019997	RBM47	100	80.513	ENSSMAG00000009744	rbm47	94	83.427	Scophthalmus_maximus
ENSCANG00000019997	RBM47	100	80.808	ENSSDUG00000022684	rbm47	100	82.540	Seriola_dumerili
ENSCANG00000019997	RBM47	100	80.556	ENSSLDG00000003109	rbm47	100	82.275	Seriola_lalandi_dorsalis
ENSCANG00000019997	RBM47	95	94.987	ENSSARG00000001735	RBM47	75	95.759	Sorex_araneus
ENSCANG00000019997	RBM47	100	88.494	ENSSPUG00000007515	RBM47	100	91.176	Sphenodon_punctatus
ENSCANG00000019997	RBM47	100	82.653	ENSSPAG00000001257	rbm47	100	83.333	Stegastes_partitus
ENSCANG00000019997	RBM47	100	96.785	ENSSSCG00000008796	RBM47	100	96.785	Sus_scrofa
ENSCANG00000019997	RBM47	100	89.447	ENSTGUG00000008705	RBM47	100	90.452	Taeniopygia_guttata
ENSCANG00000019997	RBM47	95	83.422	ENSTRUG00000014050	rbm47	100	81.551	Takifugu_rubripes
ENSCANG00000019997	RBM47	100	81.395	ENSTNIG00000006127	rbm47	95	77.972	Tetraodon_nigroviridis
ENSCANG00000019997	RBM47	95	90.642	ENSTBEG00000001607	RBM47	76	91.139	Tupaia_belangeri
ENSCANG00000019997	RBM47	100	96.774	ENSTTRG00000002839	RBM47	100	96.774	Tursiops_truncatus
ENSCANG00000019997	RBM47	100	96.801	ENSUAMG00000021346	RBM47	100	96.801	Ursus_americanus
ENSCANG00000019997	RBM47	57	98.630	ENSVPAG00000000641	-	57	98.630	Vicugna_pacos
ENSCANG00000019997	RBM47	96	94.542	ENSVVUG00000014774	RBM47	100	93.750	Vulpes_vulpes
ENSCANG00000019997	RBM47	100	85.329	ENSXETG00000012802	rbm47	100	85.329	Xenopus_tropicalis
ENSCANG00000019997	RBM47	95	83.245	ENSXCOG00000000780	rbm47	100	81.649	Xiphophorus_couchianus
ENSCANG00000019997	RBM47	100	83.245	ENSXMAG00000009874	rbm47	100	81.217	Xiphophorus_maculatus