EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000020338 (Gene tree)
Gene ID: 105500568
Gene Symbol: -
Alias: -
Full Name: PYM homolog 1%2C exon junction complex associated factor
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 27676 bases
Position: chrKN985517.1:7941499-7969174
Accession: 105500568
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000006053	Mago-bind	PF09282.10	1.1e-13	1	1
ENSCANP00000006074	Mago-bind	PF09282.10	1.9e-13	1	1
ENSCANP00000006080	Mago-bind	PF09282.10	1.9e-13	1	1
ENSCANP00000006024	Mago-bind	PF09282.10	2.5e-13	1	1
ENSCANP00000006067	Mago-bind	PF09282.10	3.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000022848	-	1233	XM_011926155	ENSCANP00000006024	204 (aa)	XP_011781545	A0A2K5HNU9
ENSCANT00000022912	-	231	-	ENSCANP00000006045	76 (aa)	-	A0A2K5HNX2
ENSCANT00000022882	-	135	-	ENSCANP00000006038	44 (aa)	-	A0A2K5HNW2
ENSCANT00000022920	-	1097	XM_011926156	ENSCANP00000006053	203 (aa)	XP_011781546	A0A2K5HNY1
ENSCANT00000023006	-	615	-	ENSCANP00000006080	204 (aa)	-	A0A2K5HP09
ENSCANT00000022955	-	603	-	ENSCANP00000006067	200 (aa)	-	A0A2K5HNZ4
ENSCANT00000022973	-	609	-	ENSCANP00000006074	202 (aa)	-	A0A2K5HP01

Gene Model

Click here to download ENSCANG00000020338's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000020338's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000020338	-	98	90.404	ENSCANG00000019757	-	86	95.263

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000020338	-	100	99.015	ENSG00000170473	PYM1	100	99.015	Homo_sapiens
ENSCANG00000020338	-	99	58.411	ENSAPOG00000023045	pym1	94	58.537	Acanthochromis_polyacanthus
ENSCANG00000020338	-	93	92.021	ENSAMEG00000003091	PYM1	93	92.021	Ailuropoda_melanoleuca
ENSCANG00000020338	-	99	60.648	ENSACIG00000012769	pym1	94	59.903	Amphilophus_citrinellus
ENSCANG00000020338	-	99	58.294	ENSAOCG00000021358	pym1	94	59.314	Amphiprion_ocellaris
ENSCANG00000020338	-	99	58.294	ENSAPEG00000022679	pym1	94	59.314	Amphiprion_percula
ENSCANG00000020338	-	99	57.277	ENSATEG00000024022	pym1	94	59.709	Anabas_testudineus
ENSCANG00000020338	-	94	69.756	ENSACAG00000005714	PYM1	94	69.756	Anolis_carolinensis
ENSCANG00000020338	-	100	98.030	ENSANAG00000036967	PYM1	100	98.030	Aotus_nancymaae
ENSCANG00000020338	-	100	57.339	ENSAMXG00000007650	pym1	94	60.194	Astyanax_mexicanus
ENSCANG00000020338	-	94	95.288	ENSBTAG00000031146	PYM1	94	95.288	Bos_taurus
ENSCANG00000020338	-	100	98.030	ENSCJAG00000041077	PYM1	100	98.030	Callithrix_jacchus
ENSCANG00000020338	-	100	97.537	ENSCAFG00000000076	PYM1	100	97.537	Canis_familiaris
ENSCANG00000020338	-	100	97.537	ENSCAFG00020026099	PYM1	100	97.537	Canis_lupus_dingo
ENSCANG00000020338	-	94	92.670	ENSCHIG00000026207	PYM1	94	92.670	Capra_hircus
ENSCANG00000020338	-	94	94.241	ENSTSYG00000000787	PYM1	94	94.241	Carlito_syrichta
ENSCANG00000020338	-	89	92.179	ENSCAPG00000010374	PYM1	94	92.179	Cavia_aperea
ENSCANG00000020338	-	94	92.670	ENSCPOG00000031546	PYM1	94	92.670	Cavia_porcellus
ENSCANG00000020338	-	100	98.522	ENSCCAG00000026187	PYM1	100	98.522	Cebus_capucinus
ENSCANG00000020338	-	100	100.000	ENSCATG00000018801	PYM1	100	100.000	Cercocebus_atys
ENSCANG00000020338	-	94	88.482	ENSCLAG00000007964	PYM1	94	88.482	Chinchilla_lanigera
ENSCANG00000020338	-	95	100.000	ENSCSAG00000005291	PYM1	99	99.485	Chlorocebus_sabaeus
ENSCANG00000020338	-	98	40.094	ENSCING00000006448	-	93	39.196	Ciona_intestinalis
ENSCANG00000020338	-	98	36.111	ENSCSAVG00000009805	-	89	40.976	Ciona_savignyi
ENSCANG00000020338	-	94	75.393	ENSCGRG00001004231	-	93	75.393	Cricetulus_griseus_chok1gshd
ENSCANG00000020338	-	94	90.052	ENSCGRG00001018051	-	94	90.052	Cricetulus_griseus_chok1gshd
ENSCANG00000020338	-	94	75.393	ENSCGRG00000018933	-	93	75.393	Cricetulus_griseus_crigri
ENSCANG00000020338	-	94	90.052	ENSCGRG00000012495	-	94	90.052	Cricetulus_griseus_crigri
ENSCANG00000020338	-	94	56.373	ENSCSEG00000021531	pym1	94	58.621	Cynoglossus_semilaevis
ENSCANG00000020338	-	99	58.937	ENSCVAG00000017360	pym1	85	56.931	Cyprinodon_variegatus
ENSCANG00000020338	-	99	58.000	ENSDARG00000046024	pym1	94	57.949	Danio_rerio
ENSCANG00000020338	-	94	92.147	ENSDNOG00000048414	PYM1	86	92.147	Dasypus_novemcinctus
ENSCANG00000020338	-	94	93.717	ENSDORG00000029448	Pym1	94	93.717	Dipodomys_ordii
ENSCANG00000020338	-	94	35.294	FBgn0034918	Pym	88	35.385	Drosophila_melanogaster
ENSCANG00000020338	-	89	87.778	ENSETEG00000004461	-	94	87.778	Echinops_telfairi
ENSCANG00000020338	-	89	96.067	ENSEASG00005002271	PYM1	81	96.067	Equus_asinus_asinus
ENSCANG00000020338	-	100	96.552	ENSECAG00000011870	PYM1	100	96.552	Equus_caballus
ENSCANG00000020338	-	96	58.291	ENSELUG00000024250	pym1	94	59.184	Esox_lucius
ENSCANG00000020338	-	94	95.812	ENSFCAG00000013967	PYM1	94	95.812	Felis_catus
ENSCANG00000020338	-	94	93.194	ENSFDAG00000006314	PYM1	94	93.194	Fukomys_damarensis
ENSCANG00000020338	-	94	58.911	ENSFHEG00000005884	pym1	94	58.911	Fundulus_heteroclitus
ENSCANG00000020338	-	94	55.779	ENSGMOG00000007239	pym1	93	55.779	Gadus_morhua
ENSCANG00000020338	-	94	70.256	ENSGALG00000046169	PYM1	94	71.066	Gallus_gallus
ENSCANG00000020338	-	99	61.033	ENSGAFG00000003280	pym1	93	61.194	Gambusia_affinis
ENSCANG00000020338	-	100	55.340	ENSGACG00000010703	pym1	94	55.897	Gasterosteus_aculeatus
ENSCANG00000020338	-	92	64.706	ENSGAGG00000001973	PYM1	88	64.706	Gopherus_agassizii
ENSCANG00000020338	-	100	98.522	ENSGGOG00000043246	PYM1	100	98.522	Gorilla_gorilla
ENSCANG00000020338	-	94	59.804	ENSHBUG00000012719	pym1	94	60.784	Haplochromis_burtoni
ENSCANG00000020338	-	94	94.241	ENSHGLG00000017155	PYM1	94	94.241	Heterocephalus_glaber_female
ENSCANG00000020338	-	94	94.241	ENSHGLG00100015341	PYM1	94	94.241	Heterocephalus_glaber_male
ENSCANG00000020338	-	99	58.095	ENSHCOG00000007987	pym1	80	58.586	Hippocampus_comes
ENSCANG00000020338	-	100	59.447	ENSIPUG00000005975	wibga	94	59.512	Ictalurus_punctatus
ENSCANG00000020338	-	94	95.812	ENSSTOG00000014206	PYM1	94	95.812	Ictidomys_tridecemlineatus
ENSCANG00000020338	-	94	90.576	ENSJJAG00000013338	Pym1	94	90.576	Jaculus_jaculus
ENSCANG00000020338	-	99	56.757	ENSKMAG00000006351	pym1	95	55.869	Kryptolebias_marmoratus
ENSCANG00000020338	-	99	59.615	ENSLBEG00000015707	pym1	94	59.296	Labrus_bergylta
ENSCANG00000020338	-	94	59.799	ENSLACG00000014398	PYM1	90	61.140	Latimeria_chalumnae
ENSCANG00000020338	-	94	93.717	ENSLAFG00000002369	PYM1	94	93.717	Loxodonta_africana
ENSCANG00000020338	-	100	100.000	ENSMFAG00000003048	PYM1	100	100.000	Macaca_fascicularis
ENSCANG00000020338	-	100	100.000	ENSMMUG00000011002	PYM1	100	100.000	Macaca_mulatta
ENSCANG00000020338	-	100	100.000	ENSMNEG00000034677	PYM1	100	100.000	Macaca_nemestrina
ENSCANG00000020338	-	100	100.000	ENSMLEG00000007971	PYM1	100	100.000	Mandrillus_leucophaeus
ENSCANG00000020338	-	99	55.909	ENSMAMG00000001588	pym1	94	57.820	Mastacembelus_armatus
ENSCANG00000020338	-	94	59.314	ENSMZEG00005026458	pym1	94	60.294	Maylandia_zebra
ENSCANG00000020338	-	94	90.052	ENSMAUG00000007318	Pym1	94	90.052	Mesocricetus_auratus
ENSCANG00000020338	-	94	95.812	ENSMICG00000032962	PYM1	94	95.812	Microcebus_murinus
ENSCANG00000020338	-	94	87.958	ENSMOCG00000010208	Pym1	94	87.958	Microtus_ochrogaster
ENSCANG00000020338	-	99	57.767	ENSMMOG00000009301	pym1	92	60.309	Mola_mola
ENSCANG00000020338	-	99	58.491	ENSMALG00000013496	pym1	94	58.706	Monopterus_albus
ENSCANG00000020338	-	94	90.052	MGP_CAROLIEiJ_G0015953	Pym1	94	90.052	Mus_caroli
ENSCANG00000020338	-	94	91.099	ENSMUSG00000064030	Pym1	94	91.099	Mus_musculus
ENSCANG00000020338	-	94	89.005	MGP_PahariEiJ_G0031131	Pym1	94	89.005	Mus_pahari
ENSCANG00000020338	-	94	91.099	MGP_SPRETEiJ_G0016778	Pym1	94	91.099	Mus_spretus
ENSCANG00000020338	-	100	97.537	ENSMPUG00000000931	PYM1	100	97.537	Mustela_putorius_furo
ENSCANG00000020338	-	94	88.482	ENSMLUG00000003586	PYM1	90	92.818	Myotis_lucifugus
ENSCANG00000020338	-	89	92.222	ENSNGAG00000019207	Pym1	88	91.713	Nannospalax_galili
ENSCANG00000020338	-	99	60.563	ENSNBRG00000006951	pym1	94	60.784	Neolamprologus_brichardi
ENSCANG00000020338	-	100	99.020	ENSNLEG00000017588	PYM1	100	99.020	Nomascus_leucogenys
ENSCANG00000020338	-	88	79.213	ENSMEUG00000001017	PYM1	93	79.096	Notamacropus_eugenii
ENSCANG00000020338	-	94	89.062	ENSOPRG00000007797	PYM1	94	89.062	Ochotona_princeps
ENSCANG00000020338	-	94	94.241	ENSODEG00000004289	PYM1	94	94.241	Octodon_degus
ENSCANG00000020338	-	94	58.937	ENSONIG00000016740	pym1	94	59.903	Oreochromis_niloticus
ENSCANG00000020338	-	91	91.713	ENSOCUG00000025969	PYM1	83	90.860	Oryctolagus_cuniculus
ENSCANG00000020338	-	99	61.722	ENSORLG00000030592	pym1	94	61.307	Oryzias_latipes
ENSCANG00000020338	-	99	61.137	ENSORLG00020011264	pym1	94	61.194	Oryzias_latipes_hni
ENSCANG00000020338	-	99	62.500	ENSORLG00015005287	pym1	94	62.121	Oryzias_latipes_hsok
ENSCANG00000020338	-	99	62.136	ENSOMEG00000022250	pym1	94	61.421	Oryzias_melastigma
ENSCANG00000020338	-	100	92.574	ENSOGAG00000007038	PYM1	99	92.574	Otolemur_garnettii
ENSCANG00000020338	-	94	93.194	ENSOARG00000010856	PYM1	94	93.194	Ovis_aries
ENSCANG00000020338	-	100	99.015	ENSPPAG00000043630	PYM1	100	99.015	Pan_paniscus
ENSCANG00000020338	-	94	94.764	ENSPPRG00000013243	PYM1	94	94.764	Panthera_pardus
ENSCANG00000020338	-	94	94.241	ENSPTIG00000017380	PYM1	94	94.241	Panthera_tigris_altaica
ENSCANG00000020338	-	100	99.015	ENSPTRG00000005067	PYM1	100	99.015	Pan_troglodytes
ENSCANG00000020338	-	100	99.510	ENSPANG00000009562	PYM1	100	99.510	Papio_anubis
ENSCANG00000020338	-	100	60.849	ENSPKIG00000006301	pym1	94	60.000	Paramormyrops_kingsleyae
ENSCANG00000020338	-	94	62.687	ENSPSIG00000003043	PYM1	94	64.039	Pelodiscus_sinensis
ENSCANG00000020338	-	100	62.201	ENSPMGG00000023161	pym1	94	62.437	Periophthalmus_magnuspinnatus
ENSCANG00000020338	-	94	89.005	ENSPEMG00000009372	Pym1	94	89.005	Peromyscus_maniculatus_bairdii
ENSCANG00000020338	-	92	79.032	ENSPCIG00000024658	PYM1	91	78.723	Phascolarctos_cinereus
ENSCANG00000020338	-	99	62.085	ENSPFOG00000008193	pym1	93	62.312	Poecilia_formosa
ENSCANG00000020338	-	99	61.137	ENSPLAG00000009228	pym1	93	61.307	Poecilia_latipinna
ENSCANG00000020338	-	99	61.137	ENSPMEG00000001505	pym1	93	61.307	Poecilia_mexicana
ENSCANG00000020338	-	100	97.549	ENSPPYG00000004635	PYM1	100	97.549	Pongo_abelii
ENSCANG00000020338	-	100	97.044	ENSPCOG00000019706	PYM1	100	97.044	Propithecus_coquereli
ENSCANG00000020338	-	95	97.396	ENSPVAG00000011437	PYM1	100	95.408	Pteropus_vampyrus
ENSCANG00000020338	-	94	61.084	ENSPNYG00000012871	pym1	94	60.591	Pundamilia_nyererei
ENSCANG00000020338	-	99	58.257	ENSPNAG00000018833	pym1	94	58.852	Pygocentrus_nattereri
ENSCANG00000020338	-	94	84.375	ENSRNOG00000058130	Pym1	94	84.375	Rattus_norvegicus
ENSCANG00000020338	-	92	67.380	ENSRNOG00000049415	AABR07055413.1	91	62.234	Rattus_norvegicus
ENSCANG00000020338	-	100	95.567	ENSRBIG00000033362	PYM1	100	95.567	Rhinopithecus_bieti
ENSCANG00000020338	-	100	100.000	ENSRROG00000043620	PYM1	100	100.000	Rhinopithecus_roxellana
ENSCANG00000020338	-	100	98.522	ENSSBOG00000029393	PYM1	100	98.522	Saimiri_boliviensis_boliviensis
ENSCANG00000020338	-	93	80.423	ENSSHAG00000008280	PYM1	93	80.423	Sarcophilus_harrisii
ENSCANG00000020338	-	93	64.062	ENSSFOG00015021475	pym1	94	63.590	Scleropages_formosus
ENSCANG00000020338	-	99	58.768	ENSSMAG00000020912	pym1	94	60.396	Scophthalmus_maximus
ENSCANG00000020338	-	99	56.744	ENSSDUG00000001807	pym1	94	59.420	Seriola_dumerili
ENSCANG00000020338	-	99	60.976	ENSSLDG00000013730	pym1	94	62.944	Seriola_lalandi_dorsalis
ENSCANG00000020338	-	89	91.111	ENSSARG00000009569	PYM1	94	91.111	Sorex_araneus
ENSCANG00000020338	-	93	64.000	ENSSPUG00000015059	PYM1	94	64.000	Sphenodon_punctatus
ENSCANG00000020338	-	99	57.477	ENSSPAG00000020100	pym1	94	57.971	Stegastes_partitus
ENSCANG00000020338	-	94	94.241	ENSSSCG00000040825	PYM1	94	94.241	Sus_scrofa
ENSCANG00000020338	-	99	58.654	ENSTRUG00000021367	pym1	93	59.694	Takifugu_rubripes
ENSCANG00000020338	-	99	54.545	ENSTNIG00000012534	pym1	92	55.340	Tetraodon_nigroviridis
ENSCANG00000020338	-	89	89.444	ENSTBEG00000004208	PYM1	94	89.444	Tupaia_belangeri
ENSCANG00000020338	-	94	93.750	ENSTTRG00000014971	PYM1	94	94.022	Tursiops_truncatus
ENSCANG00000020338	-	94	94.764	ENSUAMG00000014521	PYM1	94	94.764	Ursus_americanus
ENSCANG00000020338	-	94	90.104	ENSUMAG00000016241	PYM1	84	91.892	Ursus_maritimus
ENSCANG00000020338	-	100	96.552	ENSVVUG00000022749	PYM1	100	96.552	Vulpes_vulpes
ENSCANG00000020338	-	94	62.564	ENSXETG00000021850	pym1	94	63.452	Xenopus_tropicalis
ENSCANG00000020338	-	99	61.137	ENSXMAG00000011649	pym1	93	61.307	Xiphophorus_maculatus