EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000021804 (Gene tree)
Gene ID: 105507250
Gene Symbol: PRDM4
Alias: PFM1
Full Name: PR/SET domain 4
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Minus strand
Length: 26271 bases
Position: chrKN979385.1:19002242-19028512
Accession: 105507250
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000006537	zf-C2H2	PF00096.26	6.3e-19	1	2
ENSCANP00000006537	zf-C2H2	PF00096.26	6.3e-19	2	2
ENSCANP00000006537	zf-met	PF12874.7	4.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000024537	PRDM4-201	4143	XM_011935684	ENSCANP00000006537	801 (aa)	XP_011791074	A0A2K5HQB5

Gene Model

Click here to download ENSCANG00000021804's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000021804's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000021804	PRDM4	52	36.054	ENSCANG00000032669	PRDM10	52	36.054

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000021804	PRDM4	100	99.501	ENSG00000110851	PRDM4	100	100.000	Homo_sapiens
ENSCANG00000021804	PRDM4	99	97.121	ENSAMEG00000016174	PRDM4	99	97.121	Ailuropoda_melanoleuca
ENSCANG00000021804	PRDM4	99	87.343	ENSAPLG00000009846	PRDM4	99	86.717	Anas_platyrhynchos
ENSCANG00000021804	PRDM4	100	98.876	ENSANAG00000024800	PRDM4	100	98.876	Aotus_nancymaae
ENSCANG00000021804	PRDM4	100	97.004	ENSBTAG00000012999	PRDM4	100	97.004	Bos_taurus
ENSCANG00000021804	PRDM4	100	98.377	ENSCJAG00000015261	PRDM4	100	98.377	Callithrix_jacchus
ENSCANG00000021804	PRDM4	100	97.129	ENSCAFG00000001788	PRDM4	100	97.129	Canis_familiaris
ENSCANG00000021804	PRDM4	100	97.129	ENSCAFG00020004916	PRDM4	100	97.129	Canis_lupus_dingo
ENSCANG00000021804	PRDM4	100	96.629	ENSCHIG00000019409	PRDM4	100	96.629	Capra_hircus
ENSCANG00000021804	PRDM4	100	97.628	ENSTSYG00000009248	PRDM4	100	97.628	Carlito_syrichta
ENSCANG00000021804	PRDM4	99	90.488	ENSCAPG00000013937	PRDM4	99	90.363	Cavia_aperea
ENSCANG00000021804	PRDM4	99	89.938	ENSCPOG00000022385	PRDM4	100	89.814	Cavia_porcellus
ENSCANG00000021804	PRDM4	100	99.001	ENSCCAG00000036033	PRDM4	100	99.001	Cebus_capucinus
ENSCANG00000021804	PRDM4	100	99.376	ENSCATG00000044797	PRDM4	100	99.376	Cercocebus_atys
ENSCANG00000021804	PRDM4	99	92.786	ENSCLAG00000007545	PRDM4	100	93.159	Chinchilla_lanigera
ENSCANG00000021804	PRDM4	100	99.625	ENSCSAG00000002896	PRDM4	100	99.625	Chlorocebus_sabaeus
ENSCANG00000021804	PRDM4	71	98.182	ENSCHOG00000001744	PRDM4	86	98.182	Choloepus_hoffmanni
ENSCANG00000021804	PRDM4	99	88.331	ENSCPBG00000023187	PRDM4	100	87.955	Chrysemys_picta_bellii
ENSCANG00000021804	PRDM4	99	92.910	ENSCGRG00001015102	-	100	92.537	Cricetulus_griseus_chok1gshd
ENSCANG00000021804	PRDM4	96	92.903	ENSCGRG00000004044	-	100	92.516	Cricetulus_griseus_crigri
ENSCANG00000021804	PRDM4	100	96.255	ENSDNOG00000032478	PRDM4	100	96.255	Dasypus_novemcinctus
ENSCANG00000021804	PRDM4	99	81.932	ENSDORG00000015081	-	100	81.681	Dipodomys_ordii
ENSCANG00000021804	PRDM4	93	46.078	ENSEBUG00000003775	prdm4	99	46.047	Eptatretus_burgeri
ENSCANG00000021804	PRDM4	100	97.129	ENSECAG00000015423	PRDM4	100	97.129	Equus_caballus
ENSCANG00000021804	PRDM4	94	93.076	ENSEEUG00000006569	PRDM4	99	92.676	Erinaceus_europaeus
ENSCANG00000021804	PRDM4	99	60.510	ENSELUG00000015265	prdm4	99	60.753	Esox_lucius
ENSCANG00000021804	PRDM4	100	97.628	ENSFCAG00000022478	PRDM4	100	97.628	Felis_catus
ENSCANG00000021804	PRDM4	99	87.704	ENSFALG00000013342	PRDM4	100	87.202	Ficedula_albicollis
ENSCANG00000021804	PRDM4	100	86.924	ENSGALG00000012619	PRDM4	100	86.301	Gallus_gallus
ENSCANG00000021804	PRDM4	99	87.970	ENSGAGG00000002763	PRDM4	95	87.594	Gopherus_agassizii
ENSCANG00000021804	PRDM4	99	99.625	ENSGGOG00000001244	PRDM4	99	99.625	Gorilla_gorilla
ENSCANG00000021804	PRDM4	99	93.852	ENSHGLG00000004590	PRDM4	98	93.601	Heterocephalus_glaber_female
ENSCANG00000021804	PRDM4	99	92.795	ENSHGLG00100007464	PRDM4	100	92.547	Heterocephalus_glaber_male
ENSCANG00000021804	PRDM4	95	61.528	ENSIPUG00000024162	prdm4	93	61.880	Ictalurus_punctatus
ENSCANG00000021804	PRDM4	100	96.504	ENSSTOG00000016168	PRDM4	100	96.504	Ictidomys_tridecemlineatus
ENSCANG00000021804	PRDM4	82	93.280	ENSJJAG00000022448	-	95	93.280	Jaculus_jaculus
ENSCANG00000021804	PRDM4	99	72.772	ENSLACG00000007452	PRDM4	99	73.020	Latimeria_chalumnae
ENSCANG00000021804	PRDM4	78	42.216	ENSLOCG00000017092	prdm4	100	52.814	Lepisosteus_oculatus
ENSCANG00000021804	PRDM4	98	96.447	ENSLAFG00000001483	PRDM4	100	96.447	Loxodonta_africana
ENSCANG00000021804	PRDM4	100	99.750	ENSMFAG00000041862	PRDM4	100	99.750	Macaca_fascicularis
ENSCANG00000021804	PRDM4	100	99.750	ENSMMUG00000015550	PRDM4	100	99.750	Macaca_mulatta
ENSCANG00000021804	PRDM4	100	99.501	ENSMNEG00000032319	PRDM4	100	99.501	Macaca_nemestrina
ENSCANG00000021804	PRDM4	100	99.625	ENSMLEG00000039607	PRDM4	100	99.625	Mandrillus_leucophaeus
ENSCANG00000021804	PRDM4	99	79.280	ENSMGAG00000012815	PRDM4	100	79.000	Meleagris_gallopavo
ENSCANG00000021804	PRDM4	100	96.380	ENSMICG00000007807	PRDM4	100	96.380	Microcebus_murinus
ENSCANG00000021804	PRDM4	99	93.985	ENSMOCG00000000753	Prdm4	99	93.734	Microtus_ochrogaster
ENSCANG00000021804	PRDM4	99	94.354	ENSMUSG00000035529	Prdm4	100	94.103	Mus_musculus
ENSCANG00000021804	PRDM4	99	93.726	MGP_PahariEiJ_G0031398	Prdm4	100	93.774	Mus_pahari
ENSCANG00000021804	PRDM4	99	94.981	MGP_SPRETEiJ_G0016505	Prdm4	100	95.044	Mus_spretus
ENSCANG00000021804	PRDM4	99	91.022	ENSMPUG00000012238	PRDM4	99	91.022	Mustela_putorius_furo
ENSCANG00000021804	PRDM4	99	96.867	ENSMLUG00000000767	PRDM4	99	96.867	Myotis_lucifugus
ENSCANG00000021804	PRDM4	99	95.483	ENSNGAG00000018627	Prdm4	100	95.483	Nannospalax_galili
ENSCANG00000021804	PRDM4	100	99.376	ENSNLEG00000006748	PRDM4	100	99.376	Nomascus_leucogenys
ENSCANG00000021804	PRDM4	89	89.202	ENSMEUG00000004495	PRDM4	89	89.202	Notamacropus_eugenii
ENSCANG00000021804	PRDM4	88	95.238	ENSOPRG00000010192	PRDM4	89	95.238	Ochotona_princeps
ENSCANG00000021804	PRDM4	99	90.500	ENSODEG00000014750	PRDM4	99	90.375	Octodon_degus
ENSCANG00000021804	PRDM4	100	90.762	ENSOANG00000005526	PRDM4	100	90.762	Ornithorhynchus_anatinus
ENSCANG00000021804	PRDM4	93	96.423	ENSOCUG00000012859	PRDM4	96	96.423	Oryctolagus_cuniculus
ENSCANG00000021804	PRDM4	99	97.616	ENSOGAG00000011945	PRDM4	100	97.616	Otolemur_garnettii
ENSCANG00000021804	PRDM4	100	96.380	ENSOARG00000017955	PRDM4	100	96.380	Ovis_aries
ENSCANG00000021804	PRDM4	100	99.501	ENSPPAG00000038438	PRDM4	100	99.501	Pan_paniscus
ENSCANG00000021804	PRDM4	100	97.628	ENSPPRG00000004144	PRDM4	100	97.628	Panthera_pardus
ENSCANG00000021804	PRDM4	100	97.628	ENSPTIG00000005847	PRDM4	100	97.628	Panthera_tigris_altaica
ENSCANG00000021804	PRDM4	100	99.501	ENSPTRG00000005400	PRDM4	100	99.501	Pan_troglodytes
ENSCANG00000021804	PRDM4	100	99.750	ENSPANG00000022084	PRDM4	100	99.750	Papio_anubis
ENSCANG00000021804	PRDM4	99	59.691	ENSPKIG00000000875	prdm4	99	60.404	Paramormyrops_kingsleyae
ENSCANG00000021804	PRDM4	91	81.559	ENSPSIG00000012066	PRDM4	100	81.559	Pelodiscus_sinensis
ENSCANG00000021804	PRDM4	99	95.358	ENSPEMG00000014598	Prdm4	100	95.358	Peromyscus_maniculatus_bairdii
ENSCANG00000021804	PRDM4	100	89.179	ENSPCIG00000009471	PRDM4	100	89.179	Phascolarctos_cinereus
ENSCANG00000021804	PRDM4	100	99.376	ENSPPYG00000004913	PRDM4	100	99.376	Pongo_abelii
ENSCANG00000021804	PRDM4	83	95.833	ENSPCAG00000009987	PRDM4	83	95.833	Procavia_capensis
ENSCANG00000021804	PRDM4	100	96.629	ENSPCOG00000021060	PRDM4	100	96.629	Propithecus_coquereli
ENSCANG00000021804	PRDM4	100	96.633	ENSPVAG00000001596	PRDM4	100	96.633	Pteropus_vampyrus
ENSCANG00000021804	PRDM4	99	93.734	ENSRNOG00000004962	Prdm4	100	93.484	Rattus_norvegicus
ENSCANG00000021804	PRDM4	100	99.750	ENSRBIG00000035488	PRDM4	100	99.750	Rhinopithecus_bieti
ENSCANG00000021804	PRDM4	100	99.875	ENSRROG00000012779	PRDM4	100	99.875	Rhinopithecus_roxellana
ENSCANG00000021804	PRDM4	100	98.876	ENSSBOG00000000403	PRDM4	100	98.876	Saimiri_boliviensis_boliviensis
ENSCANG00000021804	PRDM4	99	63.793	ENSSFOG00015023358	prdm4	99	63.793	Scleropages_formosus
ENSCANG00000021804	PRDM4	100	97.129	ENSSSCG00000000160	PRDM4	100	97.129	Sus_scrofa
ENSCANG00000021804	PRDM4	99	87.594	ENSTGUG00000010962	-	99	87.093	Taeniopygia_guttata
ENSCANG00000021804	PRDM4	73	89.761	ENSTBEG00000001732	PRDM4	84	89.761	Tupaia_belangeri
ENSCANG00000021804	PRDM4	100	96.504	ENSTTRG00000011056	PRDM4	100	96.504	Tursiops_truncatus
ENSCANG00000021804	PRDM4	100	97.503	ENSUAMG00000022796	PRDM4	100	97.503	Ursus_americanus
ENSCANG00000021804	PRDM4	100	97.503	ENSUMAG00000017231	PRDM4	100	97.503	Ursus_maritimus
ENSCANG00000021804	PRDM4	99	97.365	ENSVPAG00000002215	PRDM4	100	97.365	Vicugna_pacos
ENSCANG00000021804	PRDM4	100	97.129	ENSVVUG00000023397	PRDM4	100	97.129	Vulpes_vulpes