EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000022780 (Gene tree)
Gene ID: 105521507
Gene Symbol: HNRNPU
Alias: C1orf199|FLJ30202|FLJ37978|HNRNPU-AS1|HNRPU|NCRNA00201|SAF-A|hnRNPU
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Minus strand
Length: 9862 bases
Position: chrKN982682.1:6828565-6838426
Accession: 105521507
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000007107	SAP	PF02037.27	3.5e-10	1	1
ENSCANP00000007010	SAP	PF02037.27	4e-10	1	1
ENSCANP00000007150	SAP	PF02037.27	4.1e-10	1	1
ENSCANP00000006945	SAP	PF02037.27	4.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000026016	HNRNPU-201	2448	XM_011955724	ENSCANP00000006945	815 (aa)	XP_011811114	A0A2K5HRH4
ENSCANT00000026191	HNRNPU-202	2382	-	ENSCANP00000007010	793 (aa)	-	A0A2K5HRP0
ENSCANT00000026409	HNRNPU-203	2184	-	ENSCANP00000007107	727 (aa)	-	A0A2K5HRY4
ENSCANT00000026557	HNRNPU-204	2466	-	ENSCANP00000007150	821 (aa)	-	A0A2K5HS34

Gene Model

Click here to download ENSCANG00000022780's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000022780's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000022780	HNRNPU	85	48.989	ENSCANG00000027995	HNRNPUL1	61	63.415

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000022780	HNRNPU	100	96.569	ENSG00000153187	HNRNPU	100	100.000	Homo_sapiens
ENSCANG00000022780	HNRNPU	77	77.083	ENSAPOG00000017400	hnrnpub	87	77.083	Acanthochromis_polyacanthus
ENSCANG00000022780	HNRNPU	100	95.615	ENSAMEG00000009145	HNRNPU	100	95.615	Ailuropoda_melanoleuca
ENSCANG00000022780	HNRNPU	98	56.104	ENSACIG00000012138	hnrnpub	90	80.952	Amphilophus_citrinellus
ENSCANG00000022780	HNRNPU	99	53.958	ENSAOCG00000015843	hnrnpub	90	59.196	Amphiprion_ocellaris
ENSCANG00000022780	HNRNPU	99	53.958	ENSAPEG00000014679	hnrnpub	90	59.196	Amphiprion_percula
ENSCANG00000022780	HNRNPU	98	56.044	ENSATEG00000016178	hnrnpub	87	58.059	Anabas_testudineus
ENSCANG00000022780	HNRNPU	85	82.314	ENSACAG00000004511	HNRNPU	100	73.690	Anolis_carolinensis
ENSCANG00000022780	HNRNPU	100	98.487	ENSANAG00000033895	-	100	98.487	Aotus_nancymaae
ENSCANG00000022780	HNRNPU	77	83.333	ENSACLG00000008165	hnrnpub	85	83.333	Astatotilapia_calliptera
ENSCANG00000022780	HNRNPU	98	96.894	ENSBTAG00000007606	HNRNPU	100	94.303	Bos_taurus
ENSCANG00000022780	HNRNPU	100	98.212	ENSCJAG00000016914	HNRNPU	100	98.212	Callithrix_jacchus
ENSCANG00000022780	HNRNPU	100	95.343	ENSCAFG00020000918	HNRNPU	100	95.343	Canis_lupus_dingo
ENSCANG00000022780	HNRNPU	100	95.343	ENSCHIG00000004900	HNRNPU	100	95.343	Capra_hircus
ENSCANG00000022780	HNRNPU	100	93.091	ENSCPOG00000011887	HNRNPU	100	93.576	Cavia_porcellus
ENSCANG00000022780	HNRNPU	100	98.349	ENSCCAG00000037859	-	100	98.349	Cebus_capucinus
ENSCANG00000022780	HNRNPU	100	98.624	ENSCATG00000035273	HNRNPU	100	98.624	Cercocebus_atys
ENSCANG00000022780	HNRNPU	100	93.212	ENSCLAG00000007100	HNRNPU	100	93.697	Chinchilla_lanigera
ENSCANG00000022780	HNRNPU	100	96.936	ENSCSAG00000009219	HNRNPU	100	96.936	Chlorocebus_sabaeus
ENSCANG00000022780	HNRNPU	83	100.000	ENSCHOG00000001387	HNRNPU	79	100.000	Choloepus_hoffmanni
ENSCANG00000022780	HNRNPU	100	77.924	ENSCPBG00000009415	HNRNPU	91	88.542	Chrysemys_picta_bellii
ENSCANG00000022780	HNRNPU	100	94.132	ENSCGRG00001020525	Hnrnpu	100	93.508	Cricetulus_griseus_chok1gshd
ENSCANG00000022780	HNRNPU	80	67.213	ENSCSEG00000010804	hnrnpub	96	61.802	Cynoglossus_semilaevis
ENSCANG00000022780	HNRNPU	78	71.429	ENSCVAG00000004280	hnrnpub	85	71.429	Cyprinodon_variegatus
ENSCANG00000022780	HNRNPU	80	85.714	ENSDARG00000004735	hnrnpub	86	85.714	Danio_rerio
ENSCANG00000022780	HNRNPU	79	62.319	ENSDARG00000015206	hnrnpua	92	59.003	Danio_rerio
ENSCANG00000022780	HNRNPU	85	100.000	ENSDNOG00000000215	HNRNPU	93	100.000	Dasypus_novemcinctus
ENSCANG00000022780	HNRNPU	100	92.240	ENSDORG00000015491	Hnrnpu	100	92.616	Dipodomys_ordii
ENSCANG00000022780	HNRNPU	100	92.680	ENSETEG00000014565	HNRNPU	100	92.515	Echinops_telfairi
ENSCANG00000022780	HNRNPU	100	94.730	ENSEASG00005003017	HNRNPU	100	94.730	Equus_asinus_asinus
ENSCANG00000022780	HNRNPU	100	94.485	ENSECAG00000007955	HNRNPU	100	94.485	Equus_caballus
ENSCANG00000022780	HNRNPU	99	57.200	ENSELUG00000010733	hnrnpub	68	76.087	Esox_lucius
ENSCANG00000022780	HNRNPU	99	51.549	ENSELUG00000011966	hnrnpua	90	65.079	Esox_lucius
ENSCANG00000022780	HNRNPU	100	95.343	ENSFCAG00000002156	HNRNPU	98	98.684	Felis_catus
ENSCANG00000022780	HNRNPU	91	98.822	ENSFDAG00000006026	HNRNPU	100	98.822	Fukomys_damarensis
ENSCANG00000022780	HNRNPU	78	69.643	ENSFHEG00000022639	hnrnpub	90	57.895	Fundulus_heteroclitus
ENSCANG00000022780	HNRNPU	75	78.000	ENSGMOG00000001755	hnrnpub	81	78.000	Gadus_morhua
ENSCANG00000022780	HNRNPU	95	88.889	ENSGALG00000010671	HNRNPU	91	88.368	Gallus_gallus
ENSCANG00000022780	HNRNPU	77	78.261	ENSGAFG00000009369	hnrnpub	88	59.211	Gambusia_affinis
ENSCANG00000022780	HNRNPU	76	61.246	ENSGACG00000004679	hnrnpub	99	52.934	Gasterosteus_aculeatus
ENSCANG00000022780	HNRNPU	100	98.487	ENSGGOG00000004061	HNRNPU	100	99.812	Gorilla_gorilla
ENSCANG00000022780	HNRNPU	77	83.333	ENSHBUG00000012290	hnrnpub	85	83.333	Haplochromis_burtoni
ENSCANG00000022780	HNRNPU	100	94.022	ENSHGLG00000010594	-	100	94.521	Heterocephalus_glaber_female
ENSCANG00000022780	HNRNPU	91	99.160	ENSHGLG00100015093	HNRNPU	100	99.160	Heterocephalus_glaber_male
ENSCANG00000022780	HNRNPU	77	83.333	ENSHCOG00000020091	hnrnpub	83	79.545	Hippocampus_comes
ENSCANG00000022780	HNRNPU	82	78.261	ENSIPUG00000007749	hnrnpu	92	72.549	Ictalurus_punctatus
ENSCANG00000022780	HNRNPU	100	91.294	ENSJJAG00000011371	Hnrnpu	100	92.503	Jaculus_jaculus
ENSCANG00000022780	HNRNPU	95	52.051	ENSKMAG00000004532	hnrnpub	89	58.108	Kryptolebias_marmoratus
ENSCANG00000022780	HNRNPU	81	58.667	ENSLBEG00000022520	hnrnpub	88	58.667	Labrus_bergylta
ENSCANG00000022780	HNRNPU	99	62.840	ENSLACG00000017463	HNRNPU	99	63.308	Latimeria_chalumnae
ENSCANG00000022780	HNRNPU	83	80.435	ENSLOCG00000016652	hnrnpua	99	57.798	Lepisosteus_oculatus
ENSCANG00000022780	HNRNPU	100	95.107	ENSLAFG00000021377	HNRNPU	100	94.354	Loxodonta_africana
ENSCANG00000022780	HNRNPU	100	98.624	ENSMFAG00000037308	HNRNPU	100	98.624	Macaca_fascicularis
ENSCANG00000022780	HNRNPU	100	97.372	ENSMMUG00000021098	HNRNPU	100	97.372	Macaca_mulatta
ENSCANG00000022780	HNRNPU	100	98.624	ENSMNEG00000043645	HNRNPU	100	98.624	Macaca_nemestrina
ENSCANG00000022780	HNRNPU	78	73.077	ENSMAMG00000007196	hnrnpub	86	73.077	Mastacembelus_armatus
ENSCANG00000022780	HNRNPU	77	83.333	ENSMZEG00005003185	hnrnpub	85	83.333	Maylandia_zebra
ENSCANG00000022780	HNRNPU	100	94.257	ENSMAUG00000008842	Hnrnpu	100	93.758	Mesocricetus_auratus
ENSCANG00000022780	HNRNPU	100	96.487	ENSMICG00000004616	HNRNPU	98	99.248	Microcebus_murinus
ENSCANG00000022780	HNRNPU	100	93.883	ENSMOCG00000015623	Hnrnpu	100	93.258	Microtus_ochrogaster
ENSCANG00000022780	HNRNPU	100	88.824	ENSMODG00000006515	HNRNPU	100	89.059	Monodelphis_domestica
ENSCANG00000022780	HNRNPU	75	70.588	ENSMALG00000018243	hnrnpub	85	61.318	Monopterus_albus
ENSCANG00000022780	HNRNPU	100	93.267	MGP_CAROLIEiJ_G0014962	Hnrnpu	100	92.768	Mus_caroli
ENSCANG00000022780	HNRNPU	100	93.392	ENSMUSG00000039630	Hnrnpu	100	93.516	Mus_musculus
ENSCANG00000022780	HNRNPU	100	92.403	MGP_PahariEiJ_G0028193	Hnrnpu	100	92.528	Mus_pahari
ENSCANG00000022780	HNRNPU	100	93.392	MGP_SPRETEiJ_G0015761	Hnrnpu	100	93.516	Mus_spretus
ENSCANG00000022780	HNRNPU	100	89.706	ENSMLUG00000000475	HNRNPU	100	89.338	Myotis_lucifugus
ENSCANG00000022780	HNRNPU	100	93.258	ENSNGAG00000019075	Hnrnpu	100	94.007	Nannospalax_galili
ENSCANG00000022780	HNRNPU	77	83.333	ENSNBRG00000017855	hnrnpub	85	83.333	Neolamprologus_brichardi
ENSCANG00000022780	HNRNPU	99	86.111	ENSMEUG00000000541	HNRNPU	100	86.232	Notamacropus_eugenii
ENSCANG00000022780	HNRNPU	70	97.087	ENSODEG00000014458	-	100	97.087	Octodon_degus
ENSCANG00000022780	HNRNPU	77	83.333	ENSONIG00000001260	hnrnpub	88	83.333	Oreochromis_niloticus
ENSCANG00000022780	HNRNPU	98	97.477	ENSOCUG00000014469	HNRNPU	94	92.874	Oryctolagus_cuniculus
ENSCANG00000022780	HNRNPU	77	78.261	ENSORLG00000016114	hnrnpub	86	83.333	Oryzias_latipes
ENSCANG00000022780	HNRNPU	77	78.261	ENSORLG00020005363	hnrnpub	86	83.333	Oryzias_latipes_hni
ENSCANG00000022780	HNRNPU	77	78.261	ENSORLG00015001190	hnrnpub	86	83.333	Oryzias_latipes_hsok
ENSCANG00000022780	HNRNPU	77	78.261	ENSOMEG00000014951	hnrnpub	86	83.333	Oryzias_melastigma
ENSCANG00000022780	HNRNPU	100	95.466	ENSOGAG00000014024	HNRNPU	100	95.466	Otolemur_garnettii
ENSCANG00000022780	HNRNPU	84	100.000	ENSOARG00000004985	HNRNPU	96	96.302	Ovis_aries
ENSCANG00000022780	HNRNPU	100	98.349	ENSPPAG00000038652	HNRNPU	100	98.349	Pan_paniscus
ENSCANG00000022780	HNRNPU	100	94.310	ENSPPRG00000002662	HNRNPU	98	98.684	Panthera_pardus
ENSCANG00000022780	HNRNPU	100	98.349	ENSPTRG00000002182	HNRNPU	100	98.349	Pan_troglodytes
ENSCANG00000022780	HNRNPU	100	98.624	ENSPANG00000011643	HNRNPU	100	98.624	Papio_anubis
ENSCANG00000022780	HNRNPU	98	61.012	ENSPKIG00000022332	hnrnpub	94	64.706	Paramormyrops_kingsleyae
ENSCANG00000022780	HNRNPU	98	58.950	ENSPKIG00000006885	hnrnpua	93	58.409	Paramormyrops_kingsleyae
ENSCANG00000022780	HNRNPU	100	90.095	ENSPCIG00000008657	HNRNPU	98	96.992	Phascolarctos_cinereus
ENSCANG00000022780	HNRNPU	79	64.062	ENSPFOG00000002908	hnrnpub	89	60.526	Poecilia_formosa
ENSCANG00000022780	HNRNPU	79	64.062	ENSPLAG00000004160	hnrnpub	89	60.526	Poecilia_latipinna
ENSCANG00000022780	HNRNPU	100	95.745	ENSPCOG00000018655	-	98	99.436	Propithecus_coquereli
ENSCANG00000022780	HNRNPU	100	91.411	ENSPCOG00000003883	-	100	91.544	Propithecus_coquereli
ENSCANG00000022780	HNRNPU	98	97.500	ENSPVAG00000002581	HNRNPU	100	94.061	Pteropus_vampyrus
ENSCANG00000022780	HNRNPU	77	83.333	ENSPNYG00000021642	hnrnpub	85	83.333	Pundamilia_nyererei
ENSCANG00000022780	HNRNPU	98	61.022	ENSPNAG00000001055	hnrnpub	92	64.399	Pygocentrus_nattereri
ENSCANG00000022780	HNRNPU	100	93.134	ENSRNOG00000033790	Hnrnpu	100	93.383	Rattus_norvegicus
ENSCANG00000022780	HNRNPU	100	97.662	ENSRBIG00000031519	HNRNPU	100	97.662	Rhinopithecus_bieti
ENSCANG00000022780	HNRNPU	100	98.487	ENSRROG00000041642	HNRNPU	100	98.487	Rhinopithecus_roxellana
ENSCANG00000022780	HNRNPU	98	61.446	ENSSFOG00015001124	hnrnpub	87	65.683	Scleropages_formosus
ENSCANG00000022780	HNRNPU	79	80.851	ENSSFOG00015019004	hnrnpu	83	80.851	Scleropages_formosus
ENSCANG00000022780	HNRNPU	72	70.588	ENSSMAG00000003607	hnrnpub	86	57.669	Scophthalmus_maximus
ENSCANG00000022780	HNRNPU	78	70.588	ENSSDUG00000005912	hnrnpub	85	70.588	Seriola_dumerili
ENSCANG00000022780	HNRNPU	78	70.588	ENSSLDG00000004899	hnrnpub	88	56.138	Seriola_lalandi_dorsalis
ENSCANG00000022780	HNRNPU	100	78.828	ENSSPUG00000011393	HNRNPU	100	79.543	Sphenodon_punctatus
ENSCANG00000022780	HNRNPU	71	78.261	ENSSPAG00000011853	hnrnpub	90	58.423	Stegastes_partitus
ENSCANG00000022780	HNRNPU	100	95.588	ENSSSCG00000010877	HNRNPU	100	95.588	Sus_scrofa
ENSCANG00000022780	HNRNPU	99	55.570	ENSTRUG00000007759	hnrnpub	85	64.706	Takifugu_rubripes
ENSCANG00000022780	HNRNPU	99	51.369	ENSTNIG00000009725	hnrnpub	90	68.085	Tetraodon_nigroviridis
ENSCANG00000022780	HNRNPU	70	100.000	ENSTTRG00000005281	HNRNPU	71	100.000	Tursiops_truncatus
ENSCANG00000022780	HNRNPU	100	94.424	ENSUAMG00000021120	HNRNPU	98	99.060	Ursus_americanus
ENSCANG00000022780	HNRNPU	92	94.595	ENSUMAG00000012322	HNRNPU	98	96.364	Ursus_maritimus
ENSCANG00000022780	HNRNPU	83	97.297	ENSVPAG00000010520	HNRNPU	91	97.297	Vicugna_pacos
ENSCANG00000022780	HNRNPU	100	95.343	ENSVVUG00000026524	HNRNPU	100	95.343	Vulpes_vulpes
ENSCANG00000022780	HNRNPU	99	66.950	ENSXETG00000011386	hnrnpu	99	69.278	Xenopus_tropicalis
ENSCANG00000022780	HNRNPU	77	78.261	ENSXMAG00000010356	hnrnpub	89	59.211	Xiphophorus_maculatus