EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000023715 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: splicing factor 45 pseudogene
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 1741 bases
Position: chrKN983625.1:8360870-8362610
Accession: 105524154
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000007210	RRM_1	PF00076.22	7.6e-05	1	1
ENSCANP00000007227	G-patch	PF01585.23	2.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000026822	-	1065	-	ENSCANP00000007227	354 (aa)	-	A0A2K5HSA5
ENSCANT00000026804	-	405	-	ENSCANP00000007210	134 (aa)	-	A0A2K5HS96

Gene Model

Click here to download ENSCANG00000023715's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000023715's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000023715	-	100	85.714	ENSCANG00000030987	RBM17	99	88.618

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000023715	-	100	85.714	ENSG00000134453	RBM17	98	85.714	Homo_sapiens
ENSCANG00000023715	-	69	38.614	ENSAPOG00000022094	-	78	38.614	Acanthochromis_polyacanthus
ENSCANG00000023715	-	99	74.615	ENSAPOG00000007101	rbm17	96	74.615	Acanthochromis_polyacanthus
ENSCANG00000023715	-	100	84.949	ENSAMEG00000002107	RBM17	98	84.949	Ailuropoda_melanoleuca
ENSCANG00000023715	-	99	70.380	ENSACIG00000006251	rbm17	98	70.781	Amphilophus_citrinellus
ENSCANG00000023715	-	99	74.619	ENSAOCG00000014892	rbm17	97	74.809	Amphiprion_ocellaris
ENSCANG00000023715	-	99	74.619	ENSAPEG00000022779	rbm17	97	74.809	Amphiprion_percula
ENSCANG00000023715	-	99	70.560	ENSATEG00000004406	rbm17	98	70.560	Anabas_testudineus
ENSCANG00000023715	-	100	83.715	ENSAPLG00000004190	RBM17	98	83.715	Anas_platyrhynchos
ENSCANG00000023715	-	81	90.351	ENSACAG00000005418	RBM17	99	78.649	Anolis_carolinensis
ENSCANG00000023715	-	100	85.459	ENSANAG00000030127	RBM17	94	92.241	Aotus_nancymaae
ENSCANG00000023715	-	100	76.267	ENSANAG00000019330	-	100	88.525	Aotus_nancymaae
ENSCANG00000023715	-	99	71.722	ENSACLG00000003928	rbm17	97	72.093	Astatotilapia_calliptera
ENSCANG00000023715	-	99	70.694	ENSAMXG00000005853	rbm17	98	72.304	Astyanax_mexicanus
ENSCANG00000023715	-	100	83.929	ENSBTAG00000011094	-	98	83.929	Bos_taurus
ENSCANG00000023715	-	100	84.694	ENSBTAG00000021951	RBM17	98	84.694	Bos_taurus
ENSCANG00000023715	-	72	35.088	WBGene00010233	F58B3.7	91	32.708	Caenorhabditis_elegans
ENSCANG00000023715	-	100	85.459	ENSCJAG00000020573	RBM17	98	85.459	Callithrix_jacchus
ENSCANG00000023715	-	100	84.949	ENSCAFG00000005206	RBM17	98	84.949	Canis_familiaris
ENSCANG00000023715	-	100	82.895	ENSCAFG00020005420	RBM17	98	84.252	Canis_lupus_dingo
ENSCANG00000023715	-	100	82.398	ENSCHIG00000019921	-	98	82.398	Capra_hircus
ENSCANG00000023715	-	100	84.694	ENSCHIG00000023204	-	98	85.561	Capra_hircus
ENSCANG00000023715	-	100	83.838	ENSTSYG00000001165	RBM17	97	92.174	Carlito_syrichta
ENSCANG00000023715	-	98	66.757	ENSCAPG00000006275	RBM17	100	73.699	Cavia_aperea
ENSCANG00000023715	-	100	83.333	ENSCPOG00000005679	RBM17	97	84.921	Cavia_porcellus
ENSCANG00000023715	-	100	85.459	ENSCCAG00000018655	RBM17	94	92.241	Cebus_capucinus
ENSCANG00000023715	-	100	85.714	ENSCATG00000041566	RBM17	99	88.618	Cercocebus_atys
ENSCANG00000023715	-	100	84.091	ENSCLAG00000012195	RBM17	98	84.091	Chinchilla_lanigera
ENSCANG00000023715	-	100	85.714	ENSCSAG00000013564	RBM17	98	85.714	Chlorocebus_sabaeus
ENSCANG00000023715	-	91	66.205	ENSCHOG00000005131	RBM17	98	66.205	Choloepus_hoffmanni
ENSCANG00000023715	-	100	83.461	ENSCPBG00000019836	RBM17	98	83.461	Chrysemys_picta_bellii
ENSCANG00000023715	-	69	37.624	ENSCING00000019470	-	69	37.624	Ciona_intestinalis
ENSCANG00000023715	-	75	57.547	ENSCING00000004543	-	98	51.872	Ciona_intestinalis
ENSCANG00000023715	-	100	43.797	ENSCSAVG00000008782	-	98	42.132	Ciona_savignyi
ENSCANG00000023715	-	100	84.596	ENSCGRG00001013842	Rbm17	98	84.596	Cricetulus_griseus_chok1gshd
ENSCANG00000023715	-	100	73.481	ENSCGRG00001009256	-	97	72.376	Cricetulus_griseus_chok1gshd
ENSCANG00000023715	-	100	84.596	ENSCGRG00000006907	Rbm17	98	84.596	Cricetulus_griseus_crigri
ENSCANG00000023715	-	99	72.265	ENSCSEG00000018164	rbm17	97	73.028	Cynoglossus_semilaevis
ENSCANG00000023715	-	99	69.452	ENSCVAG00000002476	rbm17	97	71.204	Cyprinodon_variegatus
ENSCANG00000023715	-	99	70.098	ENSDARG00000031346	rbm17	98	70.098	Danio_rerio
ENSCANG00000023715	-	100	84.949	ENSDNOG00000035920	RBM17	98	84.949	Dasypus_novemcinctus
ENSCANG00000023715	-	98	37.500	FBgn0086683	Spf45	99	37.265	Drosophila_melanogaster
ENSCANG00000023715	-	94	82.547	ENSETEG00000006642	RBM17	82	84.653	Echinops_telfairi
ENSCANG00000023715	-	89	51.145	ENSEBUG00000010253	rbm17	66	57.426	Eptatretus_burgeri
ENSCANG00000023715	-	94	81.892	ENSEASG00005009236	-	100	81.892	Equus_asinus_asinus
ENSCANG00000023715	-	100	83.113	ENSEASG00005019205	-	98	84.697	Equus_asinus_asinus
ENSCANG00000023715	-	100	76.943	ENSECAG00000001379	-	98	76.943	Equus_caballus
ENSCANG00000023715	-	100	76.000	ENSECAG00000008939	RBM17	98	76.267	Equus_caballus
ENSCANG00000023715	-	84	67.674	ENSEEUG00000013077	RBM17	97	67.674	Erinaceus_europaeus
ENSCANG00000023715	-	99	69.544	ENSELUG00000006440	rbm17	97	69.544	Esox_lucius
ENSCANG00000023715	-	100	84.949	ENSFCAG00000031988	RBM17	98	84.949	Felis_catus
ENSCANG00000023715	-	100	82.908	ENSFALG00000001790	RBM17	98	82.908	Ficedula_albicollis
ENSCANG00000023715	-	100	84.091	ENSFDAG00000007470	RBM17	98	84.091	Fukomys_damarensis
ENSCANG00000023715	-	99	72.751	ENSFHEG00000001266	rbm17	97	73.404	Fundulus_heteroclitus
ENSCANG00000023715	-	99	67.822	ENSGMOG00000008438	rbm17	98	67.822	Gadus_morhua
ENSCANG00000023715	-	100	83.929	ENSGALG00000006332	RBM17	98	83.929	Gallus_gallus
ENSCANG00000023715	-	99	72.589	ENSGAFG00000019879	rbm17	97	73.629	Gambusia_affinis
ENSCANG00000023715	-	99	73.469	ENSGACG00000019174	rbm17	97	73.469	Gasterosteus_aculeatus
ENSCANG00000023715	-	100	83.461	ENSGAGG00000019906	RBM17	98	83.461	Gopherus_agassizii
ENSCANG00000023715	-	84	90.756	ENSGGOG00000044184	-	96	90.756	Gorilla_gorilla
ENSCANG00000023715	-	99	74.809	ENSHBUG00000016624	rbm17	98	74.809	Haplochromis_burtoni
ENSCANG00000023715	-	100	84.091	ENSHGLG00000011580	RBM17	98	84.091	Heterocephalus_glaber_female
ENSCANG00000023715	-	97	74.157	ENSHGLG00100010556	-	99	72.191	Heterocephalus_glaber_male
ENSCANG00000023715	-	100	84.091	ENSHGLG00100010460	RBM17	98	84.091	Heterocephalus_glaber_male
ENSCANG00000023715	-	99	69.212	ENSHCOG00000010865	rbm17	98	69.212	Hippocampus_comes
ENSCANG00000023715	-	99	70.488	ENSIPUG00000007699	Rbm17	98	70.488	Ictalurus_punctatus
ENSCANG00000023715	-	100	84.596	ENSSTOG00000013591	RBM17	98	84.596	Ictidomys_tridecemlineatus
ENSCANG00000023715	-	100	84.596	ENSJJAG00000022886	Rbm17	98	84.596	Jaculus_jaculus
ENSCANG00000023715	-	94	64.499	ENSJJAG00000000993	-	95	62.060	Jaculus_jaculus
ENSCANG00000023715	-	99	71.318	ENSKMAG00000021400	rbm17	98	71.220	Kryptolebias_marmoratus
ENSCANG00000023715	-	99	73.604	ENSLBEG00000000881	rbm17	97	70.732	Labrus_bergylta
ENSCANG00000023715	-	99	60.817	ENSLACG00000017297	RBM17	97	61.058	Latimeria_chalumnae
ENSCANG00000023715	-	100	75.758	ENSLOCG00000015659	rbm17	98	75.758	Lepisosteus_oculatus
ENSCANG00000023715	-	100	84.171	ENSLAFG00000011629	RBM17	98	84.171	Loxodonta_africana
ENSCANG00000023715	-	100	85.714	ENSMFAG00000035521	RBM17	99	88.618	Macaca_fascicularis
ENSCANG00000023715	-	100	85.714	ENSMMUG00000015152	RBM17	99	88.618	Macaca_mulatta
ENSCANG00000023715	-	100	85.714	ENSMNEG00000017264	RBM17	99	88.618	Macaca_nemestrina
ENSCANG00000023715	-	100	85.714	ENSMLEG00000029340	RBM17	99	88.618	Mandrillus_leucophaeus
ENSCANG00000023715	-	99	69.512	ENSMAMG00000000387	rbm17	97	69.512	Mastacembelus_armatus
ENSCANG00000023715	-	99	72.059	ENSMZEG00005015179	rbm17	98	72.059	Maylandia_zebra
ENSCANG00000023715	-	100	82.456	ENSMGAG00000003981	RBM17	98	82.456	Meleagris_gallopavo
ENSCANG00000023715	-	100	84.596	ENSMAUG00000019247	Rbm17	98	84.596	Mesocricetus_auratus
ENSCANG00000023715	-	64	88.043	ENSMICG00000047113	-	72	88.043	Microcebus_murinus
ENSCANG00000023715	-	100	83.838	ENSMICG00000003976	-	98	83.838	Microcebus_murinus
ENSCANG00000023715	-	100	77.250	ENSMICG00000041489	-	98	77.250	Microcebus_murinus
ENSCANG00000023715	-	100	84.596	ENSMOCG00000011847	Rbm17	98	84.596	Microtus_ochrogaster
ENSCANG00000023715	-	94	69.786	ENSMOCG00000014517	-	98	69.786	Microtus_ochrogaster
ENSCANG00000023715	-	99	67.588	ENSMMOG00000010264	rbm17	97	66.247	Mola_mola
ENSCANG00000023715	-	100	84.949	ENSMODG00000016648	RBM17	98	84.949	Monodelphis_domestica
ENSCANG00000023715	-	99	72.751	ENSMALG00000010597	rbm17	97	74.339	Monopterus_albus
ENSCANG00000023715	-	100	84.343	MGP_CAROLIEiJ_G0023173	Rbm17	98	84.343	Mus_caroli
ENSCANG00000023715	-	100	84.343	ENSMUSG00000037197	Rbm17	98	84.343	Mus_musculus
ENSCANG00000023715	-	100	84.091	MGP_PahariEiJ_G0019233	Rbm17	98	84.091	Mus_pahari
ENSCANG00000023715	-	100	84.343	MGP_SPRETEiJ_G0024091	Rbm17	98	84.343	Mus_spretus
ENSCANG00000023715	-	86	84.478	ENSMPUG00000016359	RBM17	94	84.478	Mustela_putorius_furo
ENSCANG00000023715	-	100	79.337	ENSMLUG00000025709	-	98	77.806	Myotis_lucifugus
ENSCANG00000023715	-	100	82.368	ENSMLUG00000002302	-	98	82.368	Myotis_lucifugus
ENSCANG00000023715	-	100	84.596	ENSNGAG00000000741	Rbm17	98	84.596	Nannospalax_galili
ENSCANG00000023715	-	100	57.398	ENSNGAG00000000663	-	97	56.743	Nannospalax_galili
ENSCANG00000023715	-	99	72.487	ENSNBRG00000018148	rbm17	97	72.340	Neolamprologus_brichardi
ENSCANG00000023715	-	100	85.714	ENSNLEG00000033350	RBM17	96	90.756	Nomascus_leucogenys
ENSCANG00000023715	-	100	80.357	ENSMEUG00000011347	RBM17	98	80.357	Notamacropus_eugenii
ENSCANG00000023715	-	100	72.194	ENSOPRG00000002993	RBM17	98	72.194	Ochotona_princeps
ENSCANG00000023715	-	99	68.700	ENSODEG00000007286	-	99	68.700	Octodon_degus
ENSCANG00000023715	-	100	83.627	ENSODEG00000004393	RBM17	98	83.627	Octodon_degus
ENSCANG00000023715	-	99	74.495	ENSONIG00000011838	rbm17	98	74.495	Oreochromis_niloticus
ENSCANG00000023715	-	100	83.756	ENSOANG00000015455	RBM17	98	83.756	Ornithorhynchus_anatinus
ENSCANG00000023715	-	82	92.241	ENSOCUG00000004516	-	74	92.241	Oryctolagus_cuniculus
ENSCANG00000023715	-	99	71.290	ENSORLG00000028798	rbm17	97	74.352	Oryzias_latipes
ENSCANG00000023715	-	99	72.414	ENSORLG00020004593	rbm17	97	74.202	Oryzias_latipes_hni
ENSCANG00000023715	-	99	74.619	ENSORLG00015000033	rbm17	98	74.619	Oryzias_latipes_hsok
ENSCANG00000023715	-	99	71.533	ENSOMEG00000012060	rbm17	100	81.761	Oryzias_melastigma
ENSCANG00000023715	-	100	83.838	ENSOGAG00000015687	RBM17	98	83.838	Otolemur_garnettii
ENSCANG00000023715	-	100	84.694	ENSOARG00000012975	RBM17	98	84.694	Ovis_aries
ENSCANG00000023715	-	100	85.714	ENSPPAG00000032347	RBM17	96	90.756	Pan_paniscus
ENSCANG00000023715	-	100	84.949	ENSPPRG00000010706	RBM17	98	84.949	Panthera_pardus
ENSCANG00000023715	-	100	84.949	ENSPTIG00000007596	RBM17	98	84.949	Panthera_tigris_altaica
ENSCANG00000023715	-	100	85.714	ENSPTRG00000002265	RBM17	96	90.756	Pan_troglodytes
ENSCANG00000023715	-	100	85.714	ENSPANG00000023425	RBM17	99	88.618	Papio_anubis
ENSCANG00000023715	-	99	70.843	ENSPKIG00000025526	rbm17	98	70.673	Paramormyrops_kingsleyae
ENSCANG00000023715	-	100	68.668	ENSPKIG00000005048	-	98	68.668	Paramormyrops_kingsleyae
ENSCANG00000023715	-	100	82.323	ENSPSIG00000012332	RBM17	98	82.323	Pelodiscus_sinensis
ENSCANG00000023715	-	84	84.746	ENSPMGG00000007980	rbm17	97	70.000	Periophthalmus_magnuspinnatus
ENSCANG00000023715	-	100	84.596	ENSPEMG00000014320	Rbm17	98	84.596	Peromyscus_maniculatus_bairdii
ENSCANG00000023715	-	100	84.518	ENSPCIG00000019260	-	98	84.518	Phascolarctos_cinereus
ENSCANG00000023715	-	99	70.560	ENSPFOG00000013271	rbm17	98	70.560	Poecilia_formosa
ENSCANG00000023715	-	99	74.339	ENSPLAG00000004455	rbm17	97	75.332	Poecilia_latipinna
ENSCANG00000023715	-	99	72.843	ENSPMEG00000014864	rbm17	98	73.604	Poecilia_mexicana
ENSCANG00000023715	-	99	72.656	ENSPREG00000015589	rbm17	97	72.775	Poecilia_reticulata
ENSCANG00000023715	-	99	61.538	ENSPPYG00000019881	-	98	61.282	Pongo_abelii
ENSCANG00000023715	-	100	85.714	ENSPPYG00000002067	RBM17	98	85.714	Pongo_abelii
ENSCANG00000023715	-	80	59.554	ENSPPYG00000019042	-	97	59.236	Pongo_abelii
ENSCANG00000023715	-	100	77.296	ENSPCAG00000016879	RBM17	98	77.296	Procavia_capensis
ENSCANG00000023715	-	100	84.949	ENSPCOG00000027881	RBM17	98	84.949	Propithecus_coquereli
ENSCANG00000023715	-	100	76.531	ENSPVAG00000015499	RBM17	98	75.000	Pteropus_vampyrus
ENSCANG00000023715	-	99	75.556	ENSPNYG00000015274	rbm17	97	75.209	Pundamilia_nyererei
ENSCANG00000023715	-	99	72.304	ENSPNAG00000030046	rbm17	98	72.304	Pygocentrus_nattereri
ENSCANG00000023715	-	100	84.596	ENSRNOG00000018767	Rbm17	98	84.596	Rattus_norvegicus
ENSCANG00000023715	-	100	85.714	ENSRBIG00000043727	RBM17	99	88.618	Rhinopithecus_bieti
ENSCANG00000023715	-	100	85.714	ENSRROG00000044142	RBM17	99	88.618	Rhinopithecus_roxellana
ENSCANG00000023715	-	100	76.081	ENSSBOG00000023653	-	98	76.081	Saimiri_boliviensis_boliviensis
ENSCANG00000023715	-	100	85.204	ENSSBOG00000031661	-	97	90.000	Saimiri_boliviensis_boliviensis
ENSCANG00000023715	-	100	84.949	ENSSHAG00000012480	-	98	84.949	Sarcophilus_harrisii
ENSCANG00000023715	-	100	72.111	ENSSFOG00015009892	rbm17	98	72.111	Scleropages_formosus
ENSCANG00000023715	-	99	72.487	ENSSMAG00000012368	rbm17	97	73.475	Scophthalmus_maximus
ENSCANG00000023715	-	99	74.271	ENSSDUG00000015015	rbm17	97	73.936	Seriola_dumerili
ENSCANG00000023715	-	99	74.271	ENSSLDG00000014486	rbm17	97	73.936	Seriola_lalandi_dorsalis
ENSCANG00000023715	-	58	75.847	ENSSARG00000001792	-	100	75.847	Sorex_araneus
ENSCANG00000023715	-	99	83.929	ENSSPUG00000001036	RBM17	97	83.929	Sphenodon_punctatus
ENSCANG00000023715	-	99	74.365	ENSSPAG00000002338	rbm17	98	74.365	Stegastes_partitus
ENSCANG00000023715	-	100	84.439	ENSSSCG00000011134	RBM17	98	84.439	Sus_scrofa
ENSCANG00000023715	-	100	82.323	ENSTGUG00000002013	RBM17	98	82.323	Taeniopygia_guttata
ENSCANG00000023715	-	99	73.537	ENSTRUG00000010698	rbm17	98	73.537	Takifugu_rubripes
ENSCANG00000023715	-	99	73.804	ENSTNIG00000006892	rbm17	98	73.485	Tetraodon_nigroviridis
ENSCANG00000023715	-	85	96.970	ENSTBEG00000014686	RBM17	83	96.970	Tupaia_belangeri
ENSCANG00000023715	-	84	91.525	ENSTTRG00000001344	RBM17	100	83.611	Tursiops_truncatus
ENSCANG00000023715	-	100	81.771	ENSUAMG00000009499	RBM17	98	83.117	Ursus_americanus
ENSCANG00000023715	-	100	84.694	ENSUMAG00000012237	RBM17	98	85.561	Ursus_maritimus
ENSCANG00000023715	-	100	70.408	ENSVPAG00000005497	RBM17	98	70.408	Vicugna_pacos
ENSCANG00000023715	-	83	85.470	ENSVVUG00000019160	-	99	85.470	Vulpes_vulpes
ENSCANG00000023715	-	100	82.895	ENSVVUG00000006780	RBM17	98	84.252	Vulpes_vulpes
ENSCANG00000023715	-	99	76.923	ENSXETG00000018123	rbm17	98	76.923	Xenopus_tropicalis
ENSCANG00000023715	-	99	72.959	ENSXMAG00000008674	rbm17	97	73.913	Xiphophorus_maculatus