EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000026958 (Gene tree)
Gene ID: 105507192
Gene Symbol: LARP1B
Alias: DKFZp434K245|DKFZp686E0316|FLJ10378|LARP2
Full Name: La ribonucleoprotein domain family member 1B
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 134979 bases
Position: chrKN979885.1:2148637-2283615
Accession: 105507192
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000008228	La	PF05383.17	9.1e-22	1	1
ENSCANP00000008239	La	PF05383.17	1e-21	1	1
ENSCANP00000008217	La	PF05383.17	1.6e-21	1	1
ENSCANP00000008223	La	PF05383.17	1.8e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000030641	LARP1B-201	2661	XM_011935603	ENSCANP00000008217	886 (aa)	XP_011790993	A0A2K5HV70
ENSCANT00000030711	LARP1B-204	930	-	ENSCANP00000008239	309 (aa)	-	A0A2K5HV31
ENSCANT00000030668	LARP1B-203	867	-	ENSCANP00000008228	288 (aa)	-	A0A2K5HV19
ENSCANT00000030657	LARP1B-202	1416	-	ENSCANP00000008223	471 (aa)	-	A0A2K5HV11

Gene Model

Click here to download ENSCANG00000026958's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000026958's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000026958	LARP1B	96	58.590	ENSCANG00000037418	LARP1	73	65.445

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000026958	LARP1B	99	97.629	ENSG00000138709	LARP1B	96	100.000	Homo_sapiens
ENSCANG00000026958	LARP1B	97	57.384	ENSAPOG00000020101	larp1b	82	56.839	Acanthochromis_polyacanthus
ENSCANG00000026958	LARP1B	99	81.996	ENSAMEG00000002748	LARP1B	100	83.094	Ailuropoda_melanoleuca
ENSCANG00000026958	LARP1B	96	56.805	ENSACIG00000023890	larp1b	82	56.174	Amphilophus_citrinellus
ENSCANG00000026958	LARP1B	99	53.770	ENSAOCG00000014268	larp1b	84	56.242	Amphiprion_ocellaris
ENSCANG00000026958	LARP1B	98	57.528	ENSAPEG00000004126	larp1b	82	57.191	Amphiprion_percula
ENSCANG00000026958	LARP1B	99	56.119	ENSATEG00000017849	larp1b	83	56.796	Anabas_testudineus
ENSCANG00000026958	LARP1B	94	71.785	ENSAPLG00000010129	LARP1B	98	65.461	Anas_platyrhynchos
ENSCANG00000026958	LARP1B	98	68.919	ENSACAG00000011338	LARP1B	86	73.403	Anolis_carolinensis
ENSCANG00000026958	LARP1B	99	83.469	ENSANAG00000034618	LARP1B	88	83.104	Aotus_nancymaae
ENSCANG00000026958	LARP1B	96	52.935	ENSACLG00000011948	larp1b	82	54.225	Astatotilapia_calliptera
ENSCANG00000026958	LARP1B	98	55.150	ENSAMXG00000006805	larp1b	83	53.312	Astyanax_mexicanus
ENSCANG00000026958	LARP1B	100	84.148	ENSBTAG00000012135	LARP1B	99	79.615	Bos_taurus
ENSCANG00000026958	LARP1B	100	89.565	ENSCJAG00000003338	LARP1B	100	89.565	Callithrix_jacchus
ENSCANG00000026958	LARP1B	98	92.606	ENSCAFG00000003831	LARP1B	100	86.805	Canis_familiaris
ENSCANG00000026958	LARP1B	100	93.403	ENSCAFG00020018899	LARP1B	100	93.403	Canis_lupus_dingo
ENSCANG00000026958	LARP1B	100	90.657	ENSCHIG00000023144	LARP1B	100	90.657	Capra_hircus
ENSCANG00000026958	LARP1B	99	87.805	ENSTSYG00000002037	-	99	87.805	Carlito_syrichta
ENSCANG00000026958	LARP1B	73	91.964	ENSCPOG00000034668	-	93	91.964	Cavia_porcellus
ENSCANG00000026958	LARP1B	100	90.217	ENSCCAG00000021948	LARP1B	100	90.217	Cebus_capucinus
ENSCANG00000026958	LARP1B	100	91.948	ENSCATG00000013541	LARP1B	100	91.948	Cercocebus_atys
ENSCANG00000026958	LARP1B	100	87.847	ENSCLAG00000006448	-	100	87.847	Chinchilla_lanigera
ENSCANG00000026958	LARP1B	100	92.516	ENSCSAG00000003582	LARP1B	100	92.516	Chlorocebus_sabaeus
ENSCANG00000026958	LARP1B	100	81.004	ENSCHOG00000005354	LARP1B	99	80.895	Choloepus_hoffmanni
ENSCANG00000026958	LARP1B	99	73.478	ENSCPBG00000017480	LARP1B	86	73.593	Chrysemys_picta_bellii
ENSCANG00000026958	LARP1B	100	90.972	ENSCGRG00001004660	-	100	90.972	Cricetulus_griseus_chok1gshd
ENSCANG00000026958	LARP1B	100	90.625	ENSCGRG00000001914	-	100	90.625	Cricetulus_griseus_crigri
ENSCANG00000026958	LARP1B	78	61.898	ENSCSEG00000013519	larp1b	85	52.124	Cynoglossus_semilaevis
ENSCANG00000026958	LARP1B	97	54.426	ENSCVAG00000005046	larp1b	82	55.629	Cyprinodon_variegatus
ENSCANG00000026958	LARP1B	98	53.991	ENSDARG00000061169	larp1b	79	55.211	Danio_rerio
ENSCANG00000026958	LARP1B	98	80.196	ENSDNOG00000018765	-	99	80.196	Dasypus_novemcinctus
ENSCANG00000026958	LARP1B	78	92.453	ENSETEG00000012497	LARP1B	85	79.076	Echinops_telfairi
ENSCANG00000026958	LARP1B	94	49.783	ENSEBUG00000003668	larp1b	87	50.489	Eptatretus_burgeri
ENSCANG00000026958	LARP1B	99	94.774	ENSEASG00005018106	LARP1B	99	94.774	Equus_asinus_asinus
ENSCANG00000026958	LARP1B	100	84.792	ENSECAG00000001088	LARP1B	81	84.792	Equus_caballus
ENSCANG00000026958	LARP1B	99	47.233	ENSELUG00000023774	larp1b	78	52.355	Esox_lucius
ENSCANG00000026958	LARP1B	100	80.925	ENSFCAG00000014650	-	99	80.925	Felis_catus
ENSCANG00000026958	LARP1B	100	65.476	ENSFALG00000008098	LARP1B	99	66.667	Ficedula_albicollis
ENSCANG00000026958	LARP1B	98	56.551	ENSFHEG00000010264	larp1b	79	56.614	Fundulus_heteroclitus
ENSCANG00000026958	LARP1B	72	66.327	ENSGMOG00000005207	larp1b	62	68.027	Gadus_morhua
ENSCANG00000026958	LARP1B	98	65.827	ENSGALG00000010207	LARP1B	87	65.683	Gallus_gallus
ENSCANG00000026958	LARP1B	81	61.339	ENSGAFG00000012012	larp1b	86	59.926	Gambusia_affinis
ENSCANG00000026958	LARP1B	79	59.306	ENSGACG00000004609	larp1b	83	53.011	Gasterosteus_aculeatus
ENSCANG00000026958	LARP1B	99	73.427	ENSGAGG00000017209	LARP1B	85	73.326	Gopherus_agassizii
ENSCANG00000026958	LARP1B	100	91.957	ENSGGOG00000015900	LARP1B	100	91.957	Gorilla_gorilla
ENSCANG00000026958	LARP1B	96	56.883	ENSHBUG00000009730	larp1b	81	56.805	Haplochromis_burtoni
ENSCANG00000026958	LARP1B	100	86.986	ENSHGLG00000006728	-	99	87.329	Heterocephalus_glaber_female
ENSCANG00000026958	LARP1B	97	67.405	ENSHGLG00000013922	-	96	67.508	Heterocephalus_glaber_female
ENSCANG00000026958	LARP1B	97	67.405	ENSHGLG00100016491	-	96	67.508	Heterocephalus_glaber_male
ENSCANG00000026958	LARP1B	100	87.847	ENSHGLG00100014041	-	95	87.847	Heterocephalus_glaber_male
ENSCANG00000026958	LARP1B	78	60.028	ENSHCOG00000000918	larp1b	96	60.597	Hippocampus_comes
ENSCANG00000026958	LARP1B	100	55.069	ENSIPUG00000012138	larp1b	80	56.100	Ictalurus_punctatus
ENSCANG00000026958	LARP1B	93	65.461	ENSSTOG00000034510	-	90	62.270	Ictidomys_tridecemlineatus
ENSCANG00000026958	LARP1B	99	71.293	ENSSTOG00000021917	-	94	72.897	Ictidomys_tridecemlineatus
ENSCANG00000026958	LARP1B	90	77.220	ENSSTOG00000033183	-	97	76.494	Ictidomys_tridecemlineatus
ENSCANG00000026958	LARP1B	100	88.581	ENSSTOG00000008596	-	100	88.581	Ictidomys_tridecemlineatus
ENSCANG00000026958	LARP1B	99	88.462	ENSJJAG00000022360	Larp1b	99	88.462	Jaculus_jaculus
ENSCANG00000026958	LARP1B	95	55.658	ENSKMAG00000011589	larp1b	83	56.487	Kryptolebias_marmoratus
ENSCANG00000026958	LARP1B	97	57.435	ENSLBEG00000005655	larp1b	84	55.873	Labrus_bergylta
ENSCANG00000026958	LARP1B	99	68.306	ENSLACG00000015247	LARP1B	100	61.832	Latimeria_chalumnae
ENSCANG00000026958	LARP1B	99	61.352	ENSLOCG00000010684	larp1b	93	62.737	Lepisosteus_oculatus
ENSCANG00000026958	LARP1B	99	79.464	ENSLAFG00000008473	-	99	79.819	Loxodonta_africana
ENSCANG00000026958	LARP1B	100	93.254	ENSMFAG00000002218	LARP1B	100	93.254	Macaca_fascicularis
ENSCANG00000026958	LARP1B	100	71.181	ENSMFAG00000003306	-	94	71.181	Macaca_fascicularis
ENSCANG00000026958	LARP1B	100	93.254	ENSMMUG00000021347	LARP1B	100	93.254	Macaca_mulatta
ENSCANG00000026958	LARP1B	100	87.275	ENSMNEG00000030406	LARP1B	100	86.952	Macaca_nemestrina
ENSCANG00000026958	LARP1B	50	94.406	ENSMNEG00000027747	-	85	94.853	Macaca_nemestrina
ENSCANG00000026958	LARP1B	100	95.759	ENSMLEG00000009306	LARP1B	100	95.759	Mandrillus_leucophaeus
ENSCANG00000026958	LARP1B	99	54.235	ENSMAMG00000000081	larp1b	85	56.984	Mastacembelus_armatus
ENSCANG00000026958	LARP1B	88	53.521	ENSMZEG00005002545	larp1b	94	60.813	Maylandia_zebra
ENSCANG00000026958	LARP1B	98	58.128	ENSMGAG00000004809	LARP1B	98	59.534	Meleagris_gallopavo
ENSCANG00000026958	LARP1B	100	89.931	ENSMAUG00000007879	-	100	89.931	Mesocricetus_auratus
ENSCANG00000026958	LARP1B	97	67.210	ENSMICG00000028052	-	99	67.210	Microcebus_murinus
ENSCANG00000026958	LARP1B	100	87.935	ENSMICG00000036111	LARP1B	99	87.935	Microcebus_murinus
ENSCANG00000026958	LARP1B	98	83.916	ENSMICG00000037883	-	95	83.713	Microcebus_murinus
ENSCANG00000026958	LARP1B	75	92.627	ENSMOCG00000001490	Larp1b	78	92.627	Microtus_ochrogaster
ENSCANG00000026958	LARP1B	99	80.715	ENSMODG00000012300	LARP1B	81	81.257	Monodelphis_domestica
ENSCANG00000026958	LARP1B	99	57.016	ENSMALG00000003638	larp1b	84	57.714	Monopterus_albus
ENSCANG00000026958	LARP1B	100	88.194	MGP_CAROLIEiJ_G0024962	Larp1b	100	88.194	Mus_caroli
ENSCANG00000026958	LARP1B	100	89.583	ENSMUSG00000025762	Larp1b	100	89.583	Mus_musculus
ENSCANG00000026958	LARP1B	100	89.236	MGP_PahariEiJ_G0026403	Larp1b	100	89.236	Mus_pahari
ENSCANG00000026958	LARP1B	100	89.583	MGP_SPRETEiJ_G0025897	Larp1b	100	89.583	Mus_spretus
ENSCANG00000026958	LARP1B	100	84.891	ENSMPUG00000017365	LARP1B	81	84.891	Mustela_putorius_furo
ENSCANG00000026958	LARP1B	98	93.810	ENSMLUG00000010229	LARP1B	97	80.659	Myotis_lucifugus
ENSCANG00000026958	LARP1B	78	56.897	ENSNBRG00000023846	larp1b	77	56.234	Neolamprologus_brichardi
ENSCANG00000026958	LARP1B	100	91.205	ENSNLEG00000013819	LARP1B	100	91.205	Nomascus_leucogenys
ENSCANG00000026958	LARP1B	86	79.769	ENSMEUG00000010308	LARP1B	84	79.769	Notamacropus_eugenii
ENSCANG00000026958	LARP1B	90	74.812	ENSOPRG00000005478	LARP1B	87	75.063	Ochotona_princeps
ENSCANG00000026958	LARP1B	100	87.847	ENSODEG00000001292	-	100	87.847	Octodon_degus
ENSCANG00000026958	LARP1B	96	53.797	ENSONIG00000012386	larp1b	93	53.772	Oreochromis_niloticus
ENSCANG00000026958	LARP1B	100	82.826	ENSOCUG00000013330	LARP1B	98	82.826	Oryctolagus_cuniculus
ENSCANG00000026958	LARP1B	97	56.720	ENSORLG00000017954	larp1b	81	56.849	Oryzias_latipes
ENSCANG00000026958	LARP1B	97	52.941	ENSORLG00020013081	larp1b	82	53.913	Oryzias_latipes_hni
ENSCANG00000026958	LARP1B	97	56.621	ENSORLG00015009580	larp1b	81	56.621	Oryzias_latipes_hsok
ENSCANG00000026958	LARP1B	97	53.196	ENSOMEG00000004210	larp1b	81	56.419	Oryzias_melastigma
ENSCANG00000026958	LARP1B	99	82.066	ENSOGAG00000005771	LARP1B	98	84.580	Otolemur_garnettii
ENSCANG00000026958	LARP1B	100	84.056	ENSOARG00000015300	LARP1B	100	84.056	Ovis_aries
ENSCANG00000026958	LARP1B	100	91.739	ENSPPAG00000030439	LARP1B	100	91.739	Pan_paniscus
ENSCANG00000026958	LARP1B	100	81.310	ENSPPRG00000002743	-	99	81.310	Panthera_pardus
ENSCANG00000026958	LARP1B	100	81.310	ENSPTIG00000011225	LARP1B	99	81.310	Panthera_tigris_altaica
ENSCANG00000026958	LARP1B	100	91.739	ENSPTRG00000016437	LARP1B	100	91.739	Pan_troglodytes
ENSCANG00000026958	LARP1B	100	93.362	ENSPANG00000012488	LARP1B	100	93.362	Papio_anubis
ENSCANG00000026958	LARP1B	96	54.035	ENSPKIG00000014360	larp1b	89	53.118	Paramormyrops_kingsleyae
ENSCANG00000026958	LARP1B	96	73.625	ENSPSIG00000012885	LARP1B	93	73.281	Pelodiscus_sinensis
ENSCANG00000026958	LARP1B	82	60.110	ENSPMGG00000007207	larp1b	92	58.437	Periophthalmus_magnuspinnatus
ENSCANG00000026958	LARP1B	75	58.226	ENSPMAG00000002700	larp1b	94	51.407	Petromyzon_marinus
ENSCANG00000026958	LARP1B	99	84.028	ENSPCIG00000026516	LARP1B	98	85.027	Phascolarctos_cinereus
ENSCANG00000026958	LARP1B	97	53.326	ENSPFOG00000019519	larp1b	82	54.621	Poecilia_formosa
ENSCANG00000026958	LARP1B	98	46.555	ENSPFOG00000022837	-	78	48.529	Poecilia_formosa
ENSCANG00000026958	LARP1B	97	54.130	ENSPLAG00000007115	larp1b	82	55.258	Poecilia_latipinna
ENSCANG00000026958	LARP1B	97	57.943	ENSPMEG00000001224	larp1b	80	57.714	Poecilia_mexicana
ENSCANG00000026958	LARP1B	53	67.308	ENSPREG00000005955	-	72	58.051	Poecilia_reticulata
ENSCANG00000026958	LARP1B	100	80.999	ENSPCAG00000007546	LARP1B	99	80.999	Procavia_capensis
ENSCANG00000026958	LARP1B	100	82.852	ENSPCOG00000021874	LARP1B	99	94.483	Propithecus_coquereli
ENSCANG00000026958	LARP1B	100	78.455	ENSPVAG00000005373	LARP1B	99	78.532	Pteropus_vampyrus
ENSCANG00000026958	LARP1B	78	62.069	ENSPNYG00000017357	larp1b	94	60.813	Pundamilia_nyererei
ENSCANG00000026958	LARP1B	95	56.264	ENSPNAG00000008823	larp1b	84	56.324	Pygocentrus_nattereri
ENSCANG00000026958	LARP1B	100	77.910	ENSRNOG00000038366	Larp1b	100	77.910	Rattus_norvegicus
ENSCANG00000026958	LARP1B	100	87.838	ENSRBIG00000039982	-	100	87.838	Rhinopithecus_bieti
ENSCANG00000026958	LARP1B	100	80.745	ENSRBIG00000038568	-	97	76.023	Rhinopithecus_bieti
ENSCANG00000026958	LARP1B	100	93.254	ENSRROG00000030771	LARP1B	100	93.254	Rhinopithecus_roxellana
ENSCANG00000026958	LARP1B	100	89.965	ENSRROG00000038525	-	96	89.965	Rhinopithecus_roxellana
ENSCANG00000026958	LARP1B	99	77.821	ENSSHAG00000014474	LARP1B	100	78.846	Sarcophilus_harrisii
ENSCANG00000026958	LARP1B	96	55.066	ENSSMAG00000006347	larp1b	90	54.723	Scophthalmus_maximus
ENSCANG00000026958	LARP1B	96	57.679	ENSSDUG00000004182	larp1b	81	57.449	Seriola_dumerili
ENSCANG00000026958	LARP1B	96	54.598	ENSSLDG00000014613	larp1b	80	53.175	Seriola_lalandi_dorsalis
ENSCANG00000026958	LARP1B	99	67.437	ENSSPUG00000011837	LARP1B	97	64.512	Sphenodon_punctatus
ENSCANG00000026958	LARP1B	97	55.857	ENSSPAG00000017772	larp1b	82	55.736	Stegastes_partitus
ENSCANG00000026958	LARP1B	99	55.052	ENSSSCG00000040491	-	95	79.310	Sus_scrofa
ENSCANG00000026958	LARP1B	100	83.152	ENSSSCG00000034280	LARP1B	99	92.784	Sus_scrofa
ENSCANG00000026958	LARP1B	94	69.799	ENSTGUG00000002098	-	96	69.366	Taeniopygia_guttata
ENSCANG00000026958	LARP1B	98	54.670	ENSTRUG00000005612	larp1b	81	54.773	Takifugu_rubripes
ENSCANG00000026958	LARP1B	96	56.009	ENSTNIG00000012398	larp1b	94	53.747	Tetraodon_nigroviridis
ENSCANG00000026958	LARP1B	86	73.555	ENSTBEG00000004177	LARP1B	84	72.977	Tupaia_belangeri
ENSCANG00000026958	LARP1B	90	85.069	ENSTTRG00000012984	LARP1B	87	84.818	Tursiops_truncatus
ENSCANG00000026958	LARP1B	100	80.556	ENSUAMG00000016938	-	100	79.931	Ursus_americanus
ENSCANG00000026958	LARP1B	100	85.652	ENSUMAG00000007373	LARP1B	98	85.652	Ursus_maritimus
ENSCANG00000026958	LARP1B	88	88.372	ENSVPAG00000007223	LARP1B	90	81.843	Vicugna_pacos
ENSCANG00000026958	LARP1B	100	86.433	ENSVVUG00000011307	LARP1B	98	86.433	Vulpes_vulpes
ENSCANG00000026958	LARP1B	97	59.096	ENSXETG00000022512	larp1b	87	58.875	Xenopus_tropicalis
ENSCANG00000026958	LARP1B	75	59.050	ENSXCOG00000004435	larp1b	68	59.403	Xiphophorus_couchianus
ENSCANG00000026958	LARP1B	97	56.188	ENSXMAG00000008150	larp1b	81	56.146	Xiphophorus_maculatus