EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000027695 (Gene tree)
Gene ID: 105514513
Gene Symbol: SSB
Alias: LARP3|La|La/SSB
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 13547 bases
Position: chrKN981016.1:160864-174410
Accession: 105514513
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000008556	RRM_1	PF00076.22	3.4e-15	1	1
ENSCANP00000008556	RRM_3	PF08777.11	2.8e-31	1	1
ENSCANP00000008556	La	PF05383.17	4.9e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000031421	SSB-201	1658	XM_011945914	ENSCANP00000008556	405 (aa)	XP_011801304	A0A2K5HW83

Gene Model

Click here to download ENSCANG00000027695's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000027695's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000027695	SSB	100	83.210	ENSCANG00000033240	-	100	83.210
ENSCANG00000027695	SSB	98	76.942	ENSCANG00000028838	-	95	76.942

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000027695	SSB	100	98.775	ENSG00000138385	SSB	100	100.000	Homo_sapiens
ENSCANG00000027695	SSB	98	54.975	ENSAPOG00000003448	ssb	100	55.419	Acanthochromis_polyacanthus
ENSCANG00000027695	SSB	100	90.952	ENSAMEG00000010507	SSB	100	90.952	Ailuropoda_melanoleuca
ENSCANG00000027695	SSB	92	58.021	ENSACIG00000001738	ssb	97	58.021	Amphilophus_citrinellus
ENSCANG00000027695	SSB	98	55.224	ENSAOCG00000020398	ssb	100	55.665	Amphiprion_ocellaris
ENSCANG00000027695	SSB	98	55.721	ENSAPEG00000020395	ssb	100	56.158	Amphiprion_percula
ENSCANG00000027695	SSB	99	57.635	ENSATEG00000016884	ssb	100	57.882	Anabas_testudineus
ENSCANG00000027695	SSB	100	70.047	ENSAPLG00000006109	SSB	100	71.529	Anas_platyrhynchos
ENSCANG00000027695	SSB	100	66.829	ENSACAG00000017008	SSB	99	66.829	Anolis_carolinensis
ENSCANG00000027695	SSB	100	88.642	ENSANAG00000027195	-	100	88.642	Aotus_nancymaae
ENSCANG00000027695	SSB	99	54.950	ENSACLG00000010798	ssb	100	54.703	Astatotilapia_calliptera
ENSCANG00000027695	SSB	98	54.902	ENSAMXG00000012606	ssb	100	56.386	Astyanax_mexicanus
ENSCANG00000027695	SSB	100	94.321	ENSBTAG00000008716	SSB	100	94.321	Bos_taurus
ENSCANG00000027695	SSB	73	35.762	WBGene00016653	C44E4.4	86	34.012	Caenorhabditis_elegans
ENSCANG00000027695	SSB	100	97.531	ENSCJAG00000045073	SSB	100	97.531	Callithrix_jacchus
ENSCANG00000027695	SSB	100	94.828	ENSCAFG00000012418	SSB	100	94.828	Canis_familiaris
ENSCANG00000027695	SSB	100	94.828	ENSCAFG00020002900	SSB	100	94.828	Canis_lupus_dingo
ENSCANG00000027695	SSB	100	94.321	ENSCHIG00000022624	-	100	94.321	Capra_hircus
ENSCANG00000027695	SSB	100	88.889	ENSCHIG00000022196	-	100	88.889	Capra_hircus
ENSCANG00000027695	SSB	100	95.309	ENSTSYG00000000097	SSB	100	95.309	Carlito_syrichta
ENSCANG00000027695	SSB	100	95.802	ENSCPOG00000003338	SSB	100	95.802	Cavia_porcellus
ENSCANG00000027695	SSB	100	98.272	ENSCCAG00000035147	SSB	100	98.272	Cebus_capucinus
ENSCANG00000027695	SSB	100	77.531	ENSCATG00000036701	SSB	100	77.531	Cercocebus_atys
ENSCANG00000027695	SSB	100	73.086	ENSCATG00000042909	-	100	73.086	Cercocebus_atys
ENSCANG00000027695	SSB	100	95.062	ENSCLAG00000015617	-	100	95.062	Chinchilla_lanigera
ENSCANG00000027695	SSB	98	89.673	ENSCSAG00000018390	-	100	89.673	Chlorocebus_sabaeus
ENSCANG00000027695	SSB	100	99.506	ENSCSAG00000015200	SSB	89	99.506	Chlorocebus_sabaeus
ENSCANG00000027695	SSB	100	94.815	ENSCHOG00000007763	SSB	100	94.815	Choloepus_hoffmanni
ENSCANG00000027695	SSB	100	78.729	ENSCPBG00000006519	SSB	100	79.951	Chrysemys_picta_bellii
ENSCANG00000027695	SSB	100	79.268	ENSCGRG00001024831	Ssb	100	80.488	Cricetulus_griseus_chok1gshd
ENSCANG00000027695	SSB	100	79.268	ENSCGRG00000005387	Ssb	100	80.488	Cricetulus_griseus_crigri
ENSCANG00000027695	SSB	98	56.750	ENSCSEG00000011599	ssb	99	57.250	Cynoglossus_semilaevis
ENSCANG00000027695	SSB	99	57.494	ENSCVAG00000021558	ssb	100	57.740	Cyprinodon_variegatus
ENSCANG00000027695	SSB	98	57.072	ENSDARG00000029252	ssb	99	57.072	Danio_rerio
ENSCANG00000027695	SSB	100	94.321	ENSDNOG00000013450	SSB	100	94.321	Dasypus_novemcinctus
ENSCANG00000027695	SSB	100	84.915	ENSDORG00000005543	Ssb	100	84.915	Dipodomys_ordii
ENSCANG00000027695	SSB	84	34.758	FBgn0011638	La	92	34.555	Drosophila_melanogaster
ENSCANG00000027695	SSB	58	93.532	ENSETEG00000004614	-	61	93.532	Echinops_telfairi
ENSCANG00000027695	SSB	96	47.959	ENSEBUG00000001237	ssb	96	48.214	Eptatretus_burgeri
ENSCANG00000027695	SSB	100	96.049	ENSEASG00005022835	SSB	100	96.049	Equus_asinus_asinus
ENSCANG00000027695	SSB	100	96.296	ENSECAG00000018495	SSB	100	96.296	Equus_caballus
ENSCANG00000027695	SSB	82	89.286	ENSEEUG00000008077	SSB	86	89.286	Erinaceus_europaeus
ENSCANG00000027695	SSB	98	59.801	ENSELUG00000020929	ssb	100	60.294	Esox_lucius
ENSCANG00000027695	SSB	100	95.074	ENSFCAG00000011601	SSB	100	95.074	Felis_catus
ENSCANG00000027695	SSB	100	74.817	ENSFALG00000000930	SSB	100	74.817	Ficedula_albicollis
ENSCANG00000027695	SSB	100	95.309	ENSFDAG00000000598	SSB	100	95.309	Fukomys_damarensis
ENSCANG00000027695	SSB	72	54.181	ENSFHEG00000003268	ssb	95	54.575	Fundulus_heteroclitus
ENSCANG00000027695	SSB	97	54.815	ENSGMOG00000002664	ssb	99	55.556	Gadus_morhua
ENSCANG00000027695	SSB	100	74.755	ENSGALG00000009677	SSB	100	74.755	Gallus_gallus
ENSCANG00000027695	SSB	99	55.911	ENSGAFG00000002749	ssb	100	56.158	Gambusia_affinis
ENSCANG00000027695	SSB	99	53.883	ENSGACG00000005107	ssb	100	54.479	Gasterosteus_aculeatus
ENSCANG00000027695	SSB	100	77.995	ENSGAGG00000007807	SSB	100	78.729	Gopherus_agassizii
ENSCANG00000027695	SSB	64	94.828	ENSGGOG00000023471	-	100	94.828	Gorilla_gorilla
ENSCANG00000027695	SSB	100	81.728	ENSGGOG00000024891	-	100	81.728	Gorilla_gorilla
ENSCANG00000027695	SSB	99	54.455	ENSHBUG00000006584	ssb	100	54.208	Haplochromis_burtoni
ENSCANG00000027695	SSB	100	86.978	ENSHGLG00000004478	-	100	86.978	Heterocephalus_glaber_female
ENSCANG00000027695	SSB	100	93.689	ENSHGLG00000017580	-	100	93.689	Heterocephalus_glaber_female
ENSCANG00000027695	SSB	100	85.679	ENSHGLG00000005832	-	100	85.679	Heterocephalus_glaber_female
ENSCANG00000027695	SSB	100	81.975	ENSHGLG00100008767	-	100	81.975	Heterocephalus_glaber_male
ENSCANG00000027695	SSB	100	93.689	ENSHGLG00100003084	-	100	93.689	Heterocephalus_glaber_male
ENSCANG00000027695	SSB	98	55.919	ENSHCOG00000019011	ssb	99	56.171	Hippocampus_comes
ENSCANG00000027695	SSB	97	58.209	ENSIPUG00000003681	SSB	99	58.209	Ictalurus_punctatus
ENSCANG00000027695	SSB	100	95.556	ENSSTOG00000008416	SSB	100	95.556	Ictidomys_tridecemlineatus
ENSCANG00000027695	SSB	99	68.657	ENSJJAG00000016250	-	99	68.657	Jaculus_jaculus
ENSCANG00000027695	SSB	100	80.378	ENSJJAG00000023158	-	100	80.378	Jaculus_jaculus
ENSCANG00000027695	SSB	99	56.650	ENSKMAG00000017317	ssb	100	56.897	Kryptolebias_marmoratus
ENSCANG00000027695	SSB	98	53.731	ENSLBEG00000017345	ssb	100	54.433	Labrus_bergylta
ENSCANG00000027695	SSB	99	67.076	ENSLACG00000014056	SSB	99	69.853	Latimeria_chalumnae
ENSCANG00000027695	SSB	98	67.082	ENSLOCG00000007933	ssb	99	67.332	Lepisosteus_oculatus
ENSCANG00000027695	SSB	75	69.205	ENSLAFG00000026721	-	99	69.205	Loxodonta_africana
ENSCANG00000027695	SSB	100	87.678	ENSLAFG00000000867	-	100	89.100	Loxodonta_africana
ENSCANG00000027695	SSB	100	79.753	ENSLAFG00000028909	-	100	79.753	Loxodonta_africana
ENSCANG00000027695	SSB	88	83.754	ENSMFAG00000041478	-	100	83.754	Macaca_fascicularis
ENSCANG00000027695	SSB	100	99.753	ENSMFAG00000039066	SSB	100	99.753	Macaca_fascicularis
ENSCANG00000027695	SSB	99	69.231	ENSMMUG00000039889	-	100	69.479	Macaca_mulatta
ENSCANG00000027695	SSB	100	83.210	ENSMMUG00000011724	-	97	83.210	Macaca_mulatta
ENSCANG00000027695	SSB	100	99.753	ENSMMUG00000023051	SSB	100	99.753	Macaca_mulatta
ENSCANG00000027695	SSB	88	83.754	ENSMNEG00000034698	-	100	83.754	Macaca_nemestrina
ENSCANG00000027695	SSB	100	87.073	ENSMNEG00000028321	SSB	100	87.073	Macaca_nemestrina
ENSCANG00000027695	SSB	100	99.753	ENSMLEG00000035717	SSB	100	99.753	Mandrillus_leucophaeus
ENSCANG00000027695	SSB	100	70.370	ENSMLEG00000042644	-	100	70.370	Mandrillus_leucophaeus
ENSCANG00000027695	SSB	99	58.621	ENSMAMG00000004800	ssb	100	58.374	Mastacembelus_armatus
ENSCANG00000027695	SSB	99	54.950	ENSMZEG00005005749	ssb	100	54.703	Maylandia_zebra
ENSCANG00000027695	SSB	100	74.755	ENSMGAG00000010328	SSB	100	74.755	Meleagris_gallopavo
ENSCANG00000027695	SSB	98	88.665	ENSMICG00000033304	-	98	87.371	Microcebus_murinus
ENSCANG00000027695	SSB	99	96.278	ENSMICG00000028252	-	99	96.278	Microcebus_murinus
ENSCANG00000027695	SSB	100	78.072	ENSMODG00000008227	-	100	78.795	Monodelphis_domestica
ENSCANG00000027695	SSB	100	67.654	ENSMODG00000019271	-	100	67.654	Monodelphis_domestica
ENSCANG00000027695	SSB	86	81.761	ENSMODG00000007027	-	100	81.761	Monodelphis_domestica
ENSCANG00000027695	SSB	90	55.556	ENSMALG00000008045	ssb	90	58.621	Monopterus_albus
ENSCANG00000027695	SSB	100	78.147	MGP_CAROLIEiJ_G0023629	-	100	91.304	Mus_caroli
ENSCANG00000027695	SSB	100	77.435	ENSMUSG00000068882	Ssb	100	91.304	Mus_musculus
ENSCANG00000027695	SSB	100	77.197	MGP_PahariEiJ_G0025081	-	100	91.304	Mus_pahari
ENSCANG00000027695	SSB	100	77.435	MGP_SPRETEiJ_G0024551	Ssb	100	91.304	Mus_spretus
ENSCANG00000027695	SSB	100	95.556	ENSMPUG00000000785	SSB	100	95.556	Mustela_putorius_furo
ENSCANG00000027695	SSB	100	89.762	ENSMLUG00000016316	SSB	100	89.762	Myotis_lucifugus
ENSCANG00000027695	SSB	99	55.198	ENSNBRG00000012661	ssb	100	54.950	Neolamprologus_brichardi
ENSCANG00000027695	SSB	100	99.506	ENSNLEG00000004958	SSB	100	99.506	Nomascus_leucogenys
ENSCANG00000027695	SSB	100	70.197	ENSNLEG00000028754	-	100	70.690	Nomascus_leucogenys
ENSCANG00000027695	SSB	61	86.694	ENSMEUG00000001650	-	100	86.694	Notamacropus_eugenii
ENSCANG00000027695	SSB	72	75.517	ENSOPRG00000008475	-	100	75.517	Ochotona_princeps
ENSCANG00000027695	SSB	93	89.418	ENSODEG00000004202	-	100	89.418	Octodon_degus
ENSCANG00000027695	SSB	99	54.455	ENSONIG00000008776	ssb	100	54.208	Oreochromis_niloticus
ENSCANG00000027695	SSB	100	83.704	ENSOANG00000008543	SSB	100	83.704	Ornithorhynchus_anatinus
ENSCANG00000027695	SSB	100	95.062	ENSOCUG00000010396	SSB	100	95.062	Oryctolagus_cuniculus
ENSCANG00000027695	SSB	99	58.374	ENSORLG00000017208	ssb	100	58.621	Oryzias_latipes
ENSCANG00000027695	SSB	99	58.374	ENSORLG00020022574	ssb	100	58.621	Oryzias_latipes_hni
ENSCANG00000027695	SSB	99	57.882	ENSORLG00015016592	ssb	100	58.128	Oryzias_latipes_hsok
ENSCANG00000027695	SSB	98	58.105	ENSOMEG00000003193	ssb	100	59.012	Oryzias_melastigma
ENSCANG00000027695	SSB	100	90.284	ENSOGAG00000029768	SSB	100	90.284	Otolemur_garnettii
ENSCANG00000027695	SSB	100	93.827	ENSOARG00000002906	SSB	100	93.827	Ovis_aries
ENSCANG00000027695	SSB	100	98.775	ENSPPAG00000042673	SSB	100	98.775	Pan_paniscus
ENSCANG00000027695	SSB	97	76.904	ENSPPAG00000006189	-	96	80.914	Pan_paniscus
ENSCANG00000027695	SSB	100	80.494	ENSPPAG00000032427	-	100	87.597	Pan_paniscus
ENSCANG00000027695	SSB	100	95.074	ENSPPRG00000006599	SSB	100	95.074	Panthera_pardus
ENSCANG00000027695	SSB	100	95.074	ENSPTIG00000011021	SSB	97	95.074	Panthera_tigris_altaica
ENSCANG00000027695	SSB	100	98.775	ENSPTRG00000012620	SSB	100	98.775	Pan_troglodytes
ENSCANG00000027695	SSB	100	76.543	ENSPTRG00000042880	-	100	76.543	Pan_troglodytes
ENSCANG00000027695	SSB	100	99.753	ENSPANG00000007440	SSB	100	99.753	Papio_anubis
ENSCANG00000027695	SSB	100	69.383	ENSPANG00000034126	-	100	69.877	Papio_anubis
ENSCANG00000027695	SSB	98	68.922	ENSPANG00000031877	-	95	68.922	Papio_anubis
ENSCANG00000027695	SSB	98	62.095	ENSPKIG00000019325	ssb	99	62.716	Paramormyrops_kingsleyae
ENSCANG00000027695	SSB	100	75.061	ENSPSIG00000002265	SSB	93	75.795	Pelodiscus_sinensis
ENSCANG00000027695	SSB	84	55.043	ENSPMGG00000020075	ssb	91	55.331	Periophthalmus_magnuspinnatus
ENSCANG00000027695	SSB	99	44.084	ENSPMAG00000002982	ssb	89	48.438	Petromyzon_marinus
ENSCANG00000027695	SSB	100	80.296	ENSPCIG00000028591	-	100	82.759	Phascolarctos_cinereus
ENSCANG00000027695	SSB	99	56.897	ENSPFOG00000009650	ssb	100	57.143	Poecilia_formosa
ENSCANG00000027695	SSB	99	56.650	ENSPLAG00000020498	ssb	100	56.897	Poecilia_latipinna
ENSCANG00000027695	SSB	99	56.404	ENSPMEG00000001051	ssb	100	56.650	Poecilia_mexicana
ENSCANG00000027695	SSB	94	56.771	ENSPREG00000003708	ssb	99	57.031	Poecilia_reticulata
ENSCANG00000027695	SSB	100	99.506	ENSPPYG00000012919	SSB	100	99.506	Pongo_abelii
ENSCANG00000027695	SSB	95	89.817	ENSPCAG00000010276	SSB	100	89.817	Procavia_capensis
ENSCANG00000027695	SSB	100	92.593	ENSPCOG00000015741	-	100	92.593	Propithecus_coquereli
ENSCANG00000027695	SSB	100	85.185	ENSPCOG00000023189	-	100	85.185	Propithecus_coquereli
ENSCANG00000027695	SSB	87	94.350	ENSPVAG00000006615	SSB	100	94.350	Pteropus_vampyrus
ENSCANG00000027695	SSB	99	54.950	ENSPNYG00000006444	ssb	100	54.703	Pundamilia_nyererei
ENSCANG00000027695	SSB	98	57.389	ENSPNAG00000011708	ssb	100	57.561	Pygocentrus_nattereri
ENSCANG00000027695	SSB	100	77.910	ENSRNOG00000007998	Ssb	100	77.910	Rattus_norvegicus
ENSCANG00000027695	SSB	100	78.431	ENSRNOG00000011606	AABR07061825.1	100	78.431	Rattus_norvegicus
ENSCANG00000027695	SSB	100	82.683	ENSRBIG00000041972	SSB	88	100.000	Rhinopithecus_bieti
ENSCANG00000027695	SSB	94	81.794	ENSRBIG00000041232	-	98	81.794	Rhinopithecus_bieti
ENSCANG00000027695	SSB	100	71.675	ENSRBIG00000029918	-	100	71.675	Rhinopithecus_bieti
ENSCANG00000027695	SSB	89	91.989	ENSRBIG00000041608	-	98	91.989	Rhinopithecus_bieti
ENSCANG00000027695	SSB	98	82.828	ENSRROG00000031684	-	100	82.828	Rhinopithecus_roxellana
ENSCANG00000027695	SSB	100	81.281	ENSRROG00000007149	-	100	81.281	Rhinopithecus_roxellana
ENSCANG00000027695	SSB	100	100.000	ENSRROG00000040346	SSB	100	100.000	Rhinopithecus_roxellana
ENSCANG00000027695	SSB	98	90.250	ENSRROG00000034102	-	98	90.201	Rhinopithecus_roxellana
ENSCANG00000027695	SSB	100	98.765	ENSSBOG00000027204	SSB	100	98.765	Saimiri_boliviensis_boliviensis
ENSCANG00000027695	SSB	100	80.296	ENSSHAG00000018062	SSB	100	82.759	Sarcophilus_harrisii
ENSCANG00000027695	SSB	99	64.059	ENSSFOG00015000550	ssb	100	64.548	Scleropages_formosus
ENSCANG00000027695	SSB	98	53.634	ENSSMAG00000013885	ssb	99	57.219	Scophthalmus_maximus
ENSCANG00000027695	SSB	99	56.897	ENSSDUG00000020117	ssb	100	57.143	Seriola_dumerili
ENSCANG00000027695	SSB	99	55.583	ENSSLDG00000002525	ssb	100	55.583	Seriola_lalandi_dorsalis
ENSCANG00000027695	SSB	95	85.379	ENSSARG00000007747	SSB	100	85.379	Sorex_araneus
ENSCANG00000027695	SSB	100	76.167	ENSSPUG00000012112	SSB	100	76.167	Sphenodon_punctatus
ENSCANG00000027695	SSB	98	55.473	ENSSPAG00000005696	ssb	100	55.911	Stegastes_partitus
ENSCANG00000027695	SSB	98	77.078	ENSSSCG00000015938	SSB	98	77.638	Sus_scrofa
ENSCANG00000027695	SSB	100	74.572	ENSTGUG00000007942	SSB	100	74.572	Taeniopygia_guttata
ENSCANG00000027695	SSB	99	56.931	ENSTRUG00000017839	ssb	100	57.284	Takifugu_rubripes
ENSCANG00000027695	SSB	90	59.511	ENSTNIG00000000915	ssb	100	59.511	Tetraodon_nigroviridis
ENSCANG00000027695	SSB	83	100.000	ENSTBEG00000009056	SSB	82	100.000	Tupaia_belangeri
ENSCANG00000027695	SSB	100	94.335	ENSTTRG00000002152	SSB	100	94.335	Tursiops_truncatus
ENSCANG00000027695	SSB	93	95.491	ENSUAMG00000027833	SSB	99	95.491	Ursus_americanus
ENSCANG00000027695	SSB	100	94.828	ENSUMAG00000013907	SSB	100	94.828	Ursus_maritimus
ENSCANG00000027695	SSB	100	94.074	ENSVPAG00000007183	SSB	100	94.074	Vicugna_pacos
ENSCANG00000027695	SSB	100	94.828	ENSVVUG00000016573	SSB	78	94.828	Vulpes_vulpes
ENSCANG00000027695	SSB	100	58.411	ENSXETG00000025402	ssb	100	60.140	Xenopus_tropicalis
ENSCANG00000027695	SSB	94	54.569	ENSXCOG00000019109	ssb	93	61.719	Xiphophorus_couchianus
ENSCANG00000027695	SSB	99	55.665	ENSXMAG00000004888	ssb	100	55.911	Xiphophorus_maculatus