EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCANG00000027711 (Gene tree)
Gene ID: 105516085
Gene Symbol: PRPF38B
Alias: -
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Minus strand
Length: 9269 bases
Position: chrKN981303.1:2865831-2875099
Accession: 105516085
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000008589	PRP38	PF03371.15	2.2e-57	1	1
ENSCANP00000008596	PRP38	PF03371.15	1e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000031461	PRPF38B-202	573	-	ENSCANP00000008596	190 (aa)	-	A0A2K5HWC3
ENSCANT00000031454	PRPF38B-201	3453	XM_011948150	ENSCANP00000008589	546 (aa)	XP_011803540	A0A2K5HW40

Gene Model

Click here to download ENSCANG00000027711's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000027711's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000027711	PRPF38B	100	98.535	ENSCJAG00000002510	-	100	98.535	Callithrix_jacchus
ENSCANG00000027711	PRPF38B	80	95.402	ENSTSYG00000029817	PRPF38B	97	95.249	Carlito_syrichta
ENSCANG00000027711	PRPF38B	100	100.000	ENSCCAG00000033941	-	100	100.000	Cebus_capucinus
ENSCANG00000027711	PRPF38B	100	99.817	ENSCSAG00000001531	PRPF38B	100	99.817	Chlorocebus_sabaeus
ENSCANG00000027711	PRPF38B	100	98.718	ENSLAFG00000017112	PRPF38B	100	98.718	Loxodonta_africana
ENSCANG00000027711	PRPF38B	100	100.000	ENSMMUG00000010155	PRPF38B	100	100.000	Macaca_mulatta
ENSCANG00000027711	PRPF38B	100	100.000	ENSMNEG00000032003	-	100	100.000	Macaca_nemestrina
ENSCANG00000027711	PRPF38B	100	100.000	ENSMICG00000032109	PRPF38B	100	100.000	Microcebus_murinus
ENSCANG00000027711	PRPF38B	80	96.782	ENSODEG00000007646	PRPF38B	100	96.782	Octodon_degus
ENSCANG00000027711	PRPF38B	83	98.678	ENSOCUG00000027424	PRPF38B	100	98.678	Oryctolagus_cuniculus
ENSCANG00000027711	PRPF38B	100	99.267	ENSPPYG00000001092	PRPF38B	100	99.267	Pongo_abelii
ENSCANG00000027711	PRPF38B	100	100.000	ENSPCOG00000016051	PRPF38B	100	100.000	Propithecus_coquereli
ENSCANG00000027711	PRPF38B	100	100.000	ENSRBIG00000043351	PRPF38B	100	100.000	Rhinopithecus_bieti
ENSCANG00000027711	PRPF38B	100	100.000	ENSRROG00000029232	PRPF38B	100	100.000	Rhinopithecus_roxellana