EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000028141 (Gene tree)
Gene ID: 105513981
Gene Symbol: TRIM39-RPP21
Alias: -
Full Name: ribonuclease P/MRP subunit p21
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Minus strand
Length: 18836 bases
Position: chrKN980916.1:1320693-1339528
Accession: 105513981
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000009508	Rpr2	PF04032.16	2.2e-17	1	1
ENSCANP00000009503	Rpr2	PF04032.16	2.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000032376	TRIM39-RPP21-201	1512	-	ENSCANP00000009503	503 (aa)	-	A0A2K5HYS4
ENSCANT00000032381	TRIM39-RPP21-202	534	XM_011945056	ENSCANP00000009508	177 (aa)	XP_011800446	A0A2K5HYS9
ENSCANT00000032409	TRIM39-RPP21-204	1497	-	ENSCANP00000009534	498 (aa)	-	A0A2K5HYS2
ENSCANT00000032402	TRIM39-RPP21-203	3660	XM_011945054	ENSCANP00000009528	488 (aa)	XP_011800444	A0A2K5HYU8

Gene Model

Click here to download ENSCANG00000028141's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000028141's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000028141	TRIM39-RPP21	100	85.876	ENSCANG00000011612	-	100	85.876

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000028141	TRIM39-RPP21	100	99.205	ENSG00000248167	TRIM39-RPP21	100	99.205	Homo_sapiens
ENSCANG00000028141	TRIM39-RPP21	100	96.421	ENSCAFG00020017552	TRIM39-RPP21	100	96.421	Canis_lupus_dingo
ENSCANG00000028141	TRIM39-RPP21	100	99.457	ENSECAG00000015974	TRIM39-RPP21	87	99.457	Equus_caballus
ENSCANG00000028141	TRIM39-RPP21	100	95.446	ENSMICG00000004749	TRIM39-RPP21	100	95.248	Microcebus_murinus
ENSCANG00000028141	TRIM39-RPP21	83	89.398	ENSMLUG00000015705	TRIM39-RPP21	100	89.398	Myotis_lucifugus
ENSCANG00000028141	TRIM39-RPP21	94	97.458	ENSOCUG00000014141	TRIM39-RPP21	55	97.458	Oryctolagus_cuniculus
ENSCANG00000028141	TRIM39-RPP21	79	88.693	ENSSHAG00000005422	TRIM39-RPP21	99	88.693	Sarcophilus_harrisii
ENSCANG00000028141	TRIM39-RPP21	100	96.421	ENSVVUG00000009510	TRIM39-RPP21	100	96.421	Vulpes_vulpes