EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCANG00000028224 (Gene tree)
Gene ID: 105506984
Gene Symbol: -
Alias: -
Full Name: matrin 3
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 71987 bases
Position: chrKN979852.1:4593424-4665410
Accession: 105506984
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000010340	RRM_5	PF13893.6	1.4e-06	1	1
ENSCANP00000010248	RRM_5	PF13893.6	2.9e-06	1	1
ENSCANP00000010314	RRM_5	PF13893.6	3.9e-06	1	1
ENSCANP00000010295	RRM_5	PF13893.6	4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000033182	-	2541	-	ENSCANP00000010295	846 (aa)	-	A0A2K5I0Z0
ENSCANT00000033202	-	2526	-	ENSCANP00000010314	841 (aa)	-	A0A2K5I111
ENSCANT00000033228	-	1674	-	ENSCANP00000010340	557 (aa)	-	A0A2K5I136
ENSCANT00000033134	-	4919	XM_011935314	ENSCANP00000010248	895 (aa)	XP_011790704	A0A2K5I0W7
ENSCANT00000033195	-	867	-	ENSCANP00000010308	288 (aa)	-	A0A2K5I126

Gene Model

Click here to download ENSCANG00000028224's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000028224's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000028224	-	100	98.111	ENSG00000015479	MATR3	100	100.000	Homo_sapiens
ENSCANG00000028224	-	99	99.219	ENSAMEG00000011347	-	100	99.219	Ailuropoda_melanoleuca
ENSCANG00000028224	-	100	81.679	ENSAPLG00000008118	-	100	80.437	Anas_platyrhynchos
ENSCANG00000028224	-	99	72.657	ENSACAG00000016233	-	99	72.026	Anolis_carolinensis
ENSCANG00000028224	-	99	98.641	ENSANAG00000022951	-	99	98.690	Aotus_nancymaae
ENSCANG00000028224	-	84	72.939	ENSANAG00000024654	-	99	72.939	Aotus_nancymaae
ENSCANG00000028224	-	98	33.484	ENSAMXG00000010681	matr3l1.1	61	48.148	Astyanax_mexicanus
ENSCANG00000028224	-	81	38.095	ENSAMXG00000010685	matr3l1.1	84	39.706	Astyanax_mexicanus
ENSCANG00000028224	-	100	97.393	ENSBTAG00000006756	MATR3	99	98.694	Bos_taurus
ENSCANG00000028224	-	100	98.771	ENSCJAG00000006888	-	100	98.771	Callithrix_jacchus
ENSCANG00000028224	-	100	97.173	ENSCAFG00000001345	MATR3	100	97.173	Canis_familiaris
ENSCANG00000028224	-	99	98.531	ENSCAFG00020010504	-	99	98.575	Canis_lupus_dingo
ENSCANG00000028224	-	100	97.409	ENSCHIG00000025746	-	100	97.409	Capra_hircus
ENSCANG00000028224	-	100	97.521	ENSTSYG00000011028	-	100	97.521	Carlito_syrichta
ENSCANG00000028224	-	99	97.281	ENSCPOG00000014076	-	99	97.281	Cavia_porcellus
ENSCANG00000028224	-	100	97.993	ENSCCAG00000025074	-	99	99.048	Cebus_capucinus
ENSCANG00000028224	-	57	47.692	ENSCCAG00000028170	ZNF638	74	32.044	Cebus_capucinus
ENSCANG00000028224	-	99	95.691	ENSCATG00000041304	-	98	96.721	Cercocebus_atys
ENSCANG00000028224	-	54	56.000	ENSCATG00000032207	ZNF638	74	31.667	Cercocebus_atys
ENSCANG00000028224	-	99	97.633	ENSCLAG00000015998	-	99	97.633	Chinchilla_lanigera
ENSCANG00000028224	-	100	98.347	ENSCSAG00000013075	-	100	98.347	Chlorocebus_sabaeus
ENSCANG00000028224	-	100	80.723	ENSCPBG00000006303	-	100	80.613	Chrysemys_picta_bellii
ENSCANG00000028224	-	100	97.166	ENSCGRG00001020227	Matr3	100	97.166	Cricetulus_griseus_chok1gshd
ENSCANG00000028224	-	100	97.048	ENSCGRG00000011298	Matr3	100	97.048	Cricetulus_griseus_crigri
ENSCANG00000028224	-	100	32.143	ENSCSEG00000012682	matr3l1.1	74	46.429	Cynoglossus_semilaevis
ENSCANG00000028224	-	83	37.719	ENSCVAG00000005337	matr3l1.1	82	34.601	Cyprinodon_variegatus
ENSCANG00000028224	-	100	98.664	ENSDNOG00000037723	-	100	98.664	Dasypus_novemcinctus
ENSCANG00000028224	-	100	97.644	ENSEASG00005020857	-	100	97.644	Equus_asinus_asinus
ENSCANG00000028224	-	100	97.527	ENSECAG00000012882	MATR3	100	97.527	Equus_caballus
ENSCANG00000028224	-	69	49.123	ENSELUG00000021848	matr3l1.1	76	51.515	Esox_lucius
ENSCANG00000028224	-	82	42.718	ENSELUG00000021651	si:ch211-271b14.1	95	42.718	Esox_lucius
ENSCANG00000028224	-	100	97.527	ENSFCAG00000021911	-	100	97.527	Felis_catus
ENSCANG00000028224	-	100	79.781	ENSFALG00000003071	-	100	79.563	Ficedula_albicollis
ENSCANG00000028224	-	100	96.809	ENSFDAG00000017675	-	100	96.809	Fukomys_damarensis
ENSCANG00000028224	-	100	81.271	ENSGALG00000002478	MATR3	100	80.066	Gallus_gallus
ENSCANG00000028224	-	100	80.546	ENSGAGG00000011386	-	100	80.437	Gopherus_agassizii
ENSCANG00000028224	-	100	99.665	ENSGGOG00000007308	-	100	99.665	Gorilla_gorilla
ENSCANG00000028224	-	100	97.757	ENSHGLG00000004673	MATR3	100	97.757	Heterocephalus_glaber_female
ENSCANG00000028224	-	91	96.660	ENSHGLG00100006442	-	100	96.660	Heterocephalus_glaber_male
ENSCANG00000028224	-	58	49.057	ENSHCOG00000013223	matr3l1.1	90	33.597	Hippocampus_comes
ENSCANG00000028224	-	100	97.527	ENSSTOG00000014746	-	100	97.527	Ictidomys_tridecemlineatus
ENSCANG00000028224	-	91	71.176	ENSJJAG00000011022	-	97	79.282	Jaculus_jaculus
ENSCANG00000028224	-	100	96.340	ENSJJAG00000021710	-	100	96.340	Jaculus_jaculus
ENSCANG00000028224	-	64	43.210	ENSLBEG00000018267	matr3l1.1	84	43.210	Labrus_bergylta
ENSCANG00000028224	-	99	57.725	ENSLACG00000006743	-	99	59.120	Latimeria_chalumnae
ENSCANG00000028224	-	100	99.888	ENSMFAG00000000634	-	100	99.888	Macaca_fascicularis
ENSCANG00000028224	-	100	99.888	ENSMMUG00000016741	MATR3	100	99.888	Macaca_mulatta
ENSCANG00000028224	-	60	94.444	ENSMMUG00000015963	-	99	96.825	Macaca_mulatta
ENSCANG00000028224	-	100	99.881	ENSMNEG00000042856	-	100	99.881	Macaca_nemestrina
ENSCANG00000028224	-	100	99.762	ENSMLEG00000041178	-	100	99.762	Mandrillus_leucophaeus
ENSCANG00000028224	-	75	48.235	ENSMAMG00000013840	matr3l1.1	75	41.880	Mastacembelus_armatus
ENSCANG00000028224	-	100	81.161	ENSMGAG00000001331	-	100	79.956	Meleagris_gallopavo
ENSCANG00000028224	-	100	96.930	ENSMAUG00000011647	Matr3	100	96.930	Mesocricetus_auratus
ENSCANG00000028224	-	96	95.872	ENSMICG00000012438	-	99	95.618	Microcebus_murinus
ENSCANG00000028224	-	100	96.930	ENSMOCG00000015711	Matr3	100	96.930	Microtus_ochrogaster
ENSCANG00000028224	-	100	89.813	ENSMODG00000011925	-	99	88.056	Monodelphis_domestica
ENSCANG00000028224	-	100	97.048	MGP_CAROLIEiJ_G0022108	Matr3	100	97.048	Mus_caroli
ENSCANG00000028224	-	100	97.048	ENSMUSG00000037236	Matr3	100	97.048	Mus_musculus
ENSCANG00000028224	-	100	97.048	MGP_PahariEiJ_G0018842	Matr3	100	97.048	Mus_pahari
ENSCANG00000028224	-	100	96.694	MGP_SPRETEiJ_G0023020	Matr3	100	96.694	Mus_spretus
ENSCANG00000028224	-	100	95.949	ENSMPUG00000009297	-	100	95.949	Mustela_putorius_furo
ENSCANG00000028224	-	100	96.235	ENSMLUG00000005798	-	99	96.235	Myotis_lucifugus
ENSCANG00000028224	-	100	97.166	ENSNGAG00000017452	Matr3	100	97.166	Nannospalax_galili
ENSCANG00000028224	-	50	56.000	ENSNLEG00000010274	ZNF638	74	31.492	Nomascus_leucogenys
ENSCANG00000028224	-	100	98.465	ENSNLEG00000009093	-	99	99.762	Nomascus_leucogenys
ENSCANG00000028224	-	99	93.919	ENSOPRG00000016511	-	100	93.919	Ochotona_princeps
ENSCANG00000028224	-	99	97.163	ENSODEG00000003015	-	99	97.163	Octodon_degus
ENSCANG00000028224	-	100	97.639	ENSOCUG00000026311	MATR3	100	97.639	Oryctolagus_cuniculus
ENSCANG00000028224	-	73	37.879	ENSORLG00020009362	matr3l1.1	81	37.162	Oryzias_latipes_hni
ENSCANG00000028224	-	66	48.148	ENSORLG00015018551	matr3l1.1	81	37.333	Oryzias_latipes_hsok
ENSCANG00000028224	-	73	32.812	ENSOMEG00000022287	matr3l1.1	80	33.333	Oryzias_melastigma
ENSCANG00000028224	-	100	98.229	ENSOGAG00000010607	-	100	98.229	Otolemur_garnettii
ENSCANG00000028224	-	100	97.409	ENSOARG00000016931	-	99	97.409	Ovis_aries
ENSCANG00000028224	-	100	99.665	ENSPPAG00000001418	-	100	99.665	Pan_paniscus
ENSCANG00000028224	-	97	91.682	ENSPPAG00000026720	-	99	91.773	Pan_paniscus
ENSCANG00000028224	-	100	97.644	ENSPPRG00000008004	-	100	97.644	Panthera_pardus
ENSCANG00000028224	-	97	96.685	ENSPTIG00000010711	-	100	97.660	Panthera_tigris_altaica
ENSCANG00000028224	-	100	99.665	ENSPTRG00000017294	MATR3	100	99.665	Pan_troglodytes
ENSCANG00000028224	-	100	99.888	ENSPANG00000012018	-	100	99.888	Papio_anubis
ENSCANG00000028224	-	97	97.597	ENSPANG00000032489	-	99	97.445	Papio_anubis
ENSCANG00000028224	-	93	41.379	ENSPKIG00000000333	matr3l1.1	58	38.710	Paramormyrops_kingsleyae
ENSCANG00000028224	-	100	81.072	ENSPSIG00000014598	-	100	80.963	Pelodiscus_sinensis
ENSCANG00000028224	-	100	96.576	ENSPEMG00000020679	Matr3	100	96.576	Peromyscus_maniculatus_bairdii
ENSCANG00000028224	-	100	99.888	ENSPPYG00000015835	-	100	99.888	Pongo_abelii
ENSCANG00000028224	-	100	97.639	ENSPCOG00000025718	-	100	97.639	Propithecus_coquereli
ENSCANG00000028224	-	98	99.204	ENSPVAG00000015431	-	100	99.204	Pteropus_vampyrus
ENSCANG00000028224	-	51	59.016	ENSPNAG00000030007	si:ch211-271b14.1	56	59.016	Pygocentrus_nattereri
ENSCANG00000028224	-	100	96.576	ENSRNOG00000019875	Matr3	100	96.576	Rattus_norvegicus
ENSCANG00000028224	-	99	95.871	ENSRBIG00000034713	-	98	96.903	Rhinopithecus_bieti
ENSCANG00000028224	-	50	56.000	ENSRROG00000045431	ZNF638	74	32.222	Rhinopithecus_roxellana
ENSCANG00000028224	-	100	96.576	ENSRROG00000043949	-	100	96.576	Rhinopithecus_roxellana
ENSCANG00000028224	-	100	99.461	ENSRROG00000039415	-	100	98.994	Rhinopithecus_roxellana
ENSCANG00000028224	-	100	97.875	ENSSBOG00000030159	-	100	97.875	Saimiri_boliviensis_boliviensis
ENSCANG00000028224	-	51	47.692	ENSSBOG00000029960	ZNF638	74	32.044	Saimiri_boliviensis_boliviensis
ENSCANG00000028224	-	100	89.930	ENSSHAG00000010331	-	99	88.173	Sarcophilus_harrisii
ENSCANG00000028224	-	67	55.556	ENSSDUG00000015369	matr3l1.1	53	51.471	Seriola_dumerili
ENSCANG00000028224	-	99	79.978	ENSSPUG00000019236	-	99	79.605	Sphenodon_punctatus
ENSCANG00000028224	-	100	97.527	ENSSSCG00000014343	-	100	97.527	Sus_scrofa
ENSCANG00000028224	-	99	80.723	ENSTGUG00000014568	MATR3	99	79.737	Taeniopygia_guttata
ENSCANG00000028224	-	76	57.143	ENSTNIG00000003166	matr3l1.1	73	57.143	Tetraodon_nigroviridis
ENSCANG00000028224	-	85	97.218	ENSUAMG00000000097	-	97	98.886	Ursus_americanus
ENSCANG00000028224	-	100	97.055	ENSUMAG00000015808	-	100	97.055	Ursus_maritimus
ENSCANG00000028224	-	100	98.331	ENSVPAG00000006337	-	100	98.331	Vicugna_pacos
ENSCANG00000028224	-	100	97.409	ENSVVUG00000020287	-	100	97.409	Vulpes_vulpes
ENSCANG00000028224	-	100	55.640	ENSXETG00000003838	matr3	100	55.109	Xenopus_tropicalis
ENSCANG00000028224	-	64	34.343	ENSXMAG00000014107	-	70	57.143	Xiphophorus_maculatus