EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000028271 (Gene tree)
Gene ID: 105514314
Gene Symbol: SRRM1
Alias: MGC39488|POP101|SRM160
Full Name: serine and arginine repetitive matrix 1
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 30294 bases
Position: chrKN980939.1:2603583-2633876
Accession: 105514314
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000009909	PWI	PF01480.17	8.1e-30	1	1
ENSCANP00000009887	PWI	PF01480.17	8.7e-30	1	1
ENSCANP00000009901	PWI	PF01480.17	8.8e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000032767	SRRM1-201	3997	XM_011945607	ENSCANP00000009887	904 (aa)	XP_011800997	A0A2K5HZZ5
ENSCANT00000032789	SRRM1-203	2451	-	ENSCANP00000009909	816 (aa)	-	A0A2K5HZW1
ENSCANT00000032781	SRRM1-202	2742	XM_011945605	ENSCANP00000009901	913 (aa)	XP_011800995	A0A2K5I040

Gene Model

Click here to download ENSCANG00000028271's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000028271's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000028271	SRRM1	58	77.672	ENSCANG00000026444	-	60	74.717

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000028271	SRRM1	100	99.562	ENSG00000133226	SRRM1	100	100.000	Homo_sapiens
ENSCANG00000028271	SRRM1	100	98.028	ENSAMEG00000010075	SRRM1	100	98.028	Ailuropoda_melanoleuca
ENSCANG00000028271	SRRM1	100	98.673	ENSANAG00000035606	SRRM1	100	98.673	Aotus_nancymaae
ENSCANG00000028271	SRRM1	100	97.345	ENSBTAG00000013772	SRRM1	56	96.040	Bos_taurus
ENSCANG00000028271	SRRM1	100	98.248	ENSCJAG00000020822	SRRM1	100	98.248	Callithrix_jacchus
ENSCANG00000028271	SRRM1	100	97.898	ENSCAFG00020020948	SRRM1	100	97.898	Canis_lupus_dingo
ENSCANG00000028271	SRRM1	96	89.245	ENSCAFG00020000003	-	98	89.322	Canis_lupus_dingo
ENSCANG00000028271	SRRM1	100	98.028	ENSTSYG00000006782	SRRM1	100	98.028	Carlito_syrichta
ENSCANG00000028271	SRRM1	99	94.426	ENSCAPG00000011473	SRRM1	100	94.426	Cavia_aperea
ENSCANG00000028271	SRRM1	100	98.467	ENSCCAG00000029474	SRRM1	100	98.467	Cebus_capucinus
ENSCANG00000028271	SRRM1	100	99.632	ENSCATG00000031303	SRRM1	100	99.632	Cercocebus_atys
ENSCANG00000028271	SRRM1	74	97.222	ENSCHOG00000000027	SRRM1	73	98.592	Choloepus_hoffmanni
ENSCANG00000028271	SRRM1	100	96.296	ENSEASG00005004270	SRRM1	100	96.296	Equus_asinus_asinus
ENSCANG00000028271	SRRM1	100	97.013	ENSECAG00000026981	SRRM1	100	97.013	Equus_caballus
ENSCANG00000028271	SRRM1	51	100.000	ENSEEUG00000013830	SRRM1	63	90.385	Erinaceus_europaeus
ENSCANG00000028271	SRRM1	100	98.119	ENSFCAG00000000678	-	100	98.119	Felis_catus
ENSCANG00000028271	SRRM1	100	99.452	ENSGGOG00000005209	SRRM1	100	99.452	Gorilla_gorilla
ENSCANG00000028271	SRRM1	100	98.119	ENSSTOG00000014640	SRRM1	100	98.119	Ictidomys_tridecemlineatus
ENSCANG00000028271	SRRM1	99	68.820	ENSMFAG00000038841	-	61	80.885	Macaca_fascicularis
ENSCANG00000028271	SRRM1	100	99.668	ENSMFAG00000025726	SRRM1	100	99.668	Macaca_fascicularis
ENSCANG00000028271	SRRM1	100	99.558	ENSMMUG00000006645	SRRM1	100	99.558	Macaca_mulatta
ENSCANG00000028271	SRRM1	100	99.668	ENSMNEG00000039415	SRRM1	100	99.668	Macaca_nemestrina
ENSCANG00000028271	SRRM1	59	70.709	ENSMLEG00000032221	-	61	73.384	Mandrillus_leucophaeus
ENSCANG00000028271	SRRM1	61	98.603	ENSMLEG00000038030	-	100	93.995	Mandrillus_leucophaeus
ENSCANG00000028271	SRRM1	100	98.009	ENSMICG00000006553	SRRM1	100	98.009	Microcebus_murinus
ENSCANG00000028271	SRRM1	96	94.743	ENSMLUG00000006246	SRRM1	87	94.743	Myotis_lucifugus
ENSCANG00000028271	SRRM1	100	99.562	ENSNLEG00000008966	SRRM1	100	99.562	Nomascus_leucogenys
ENSCANG00000028271	SRRM1	60	89.815	ENSMEUG00000014704	SRRM1	59	83.182	Notamacropus_eugenii
ENSCANG00000028271	SRRM1	100	96.732	ENSOGAG00000010210	SRRM1	100	96.732	Otolemur_garnettii
ENSCANG00000028271	SRRM1	100	99.452	ENSPPAG00000043918	SRRM1	100	99.452	Pan_paniscus
ENSCANG00000028271	SRRM1	100	98.119	ENSPPRG00000002509	SRRM1	100	98.119	Panthera_pardus
ENSCANG00000028271	SRRM1	59	94.171	ENSPTIG00000008778	-	60	93.878	Panthera_tigris_altaica
ENSCANG00000028271	SRRM1	100	99.558	ENSPTRG00000000349	SRRM1	100	99.558	Pan_troglodytes
ENSCANG00000028271	SRRM1	55	79.637	ENSPANG00000035568	-	59	78.629	Papio_anubis
ENSCANG00000028271	SRRM1	100	99.632	ENSPANG00000010194	SRRM1	100	99.632	Papio_anubis
ENSCANG00000028271	SRRM1	100	99.234	ENSPPYG00000001716	SRRM1	100	99.234	Pongo_abelii
ENSCANG00000028271	SRRM1	52	100.000	ENSPCAG00000015138	SRRM1	52	100.000	Procavia_capensis
ENSCANG00000028271	SRRM1	100	98.249	ENSPCOG00000021311	SRRM1	100	98.249	Propithecus_coquereli
ENSCANG00000028271	SRRM1	100	97.809	ENSPVAG00000005836	SRRM1	100	97.809	Pteropus_vampyrus
ENSCANG00000028271	SRRM1	99	92.982	ENSRBIG00000035461	SRRM1	99	92.982	Rhinopithecus_bieti
ENSCANG00000028271	SRRM1	100	99.671	ENSRROG00000035151	SRRM1	100	99.671	Rhinopithecus_roxellana
ENSCANG00000028271	SRRM1	100	97.371	ENSSBOG00000019884	SRRM1	99	100.000	Saimiri_boliviensis_boliviensis
ENSCANG00000028271	SRRM1	61	94.754	ENSSARG00000013718	SRRM1	60	94.754	Sorex_araneus
ENSCANG00000028271	SRRM1	99	97.366	ENSSSCG00000032947	SRRM1	100	97.808	Sus_scrofa
ENSCANG00000028271	SRRM1	99	97.241	ENSTTRG00000009365	SRRM1	100	97.241	Tursiops_truncatus
ENSCANG00000028271	SRRM1	88	98.622	ENSUMAG00000013121	SRRM1	95	98.622	Ursus_maritimus
ENSCANG00000028271	SRRM1	96	93.424	ENSVPAG00000007698	SRRM1	100	93.424	Vicugna_pacos
ENSCANG00000028271	SRRM1	96	98.342	ENSVVUG00000026966	SRRM1	97	95.307	Vulpes_vulpes