EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCANG00000028576 (Gene tree)
Gene ID: 105526487
Gene Symbol: RPUSD1
Alias: C16orf40|MGC19600|RLUCL
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Minus strand
Length: 1661 bases
Position: chrKN984673.1:10740136-10741796
Accession: 105526487
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000010337	PseudoU_synth_2	PF00849.22	2.6e-24	1	1
ENSCANP00000010344	PseudoU_synth_2	PF00849.22	2.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000033225	RPUSD1-201	843	XM_011962489	ENSCANP00000010337	281 (aa)	XP_011817879	A0A2K5I1A5
ENSCANT00000033232	RPUSD1-202	396	-	ENSCANP00000010344	131 (aa)	-	A0A2K5I138

Gene Model

Click here to download ENSCANG00000028576's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000028576's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000028576	RPUSD1	100	96.947	ENSG00000007376	RPUSD1	100	96.947	Homo_sapiens
ENSCANG00000028576	RPUSD1	90	64.032	ENSAPOG00000022221	rpusd1	82	64.032	Acanthochromis_polyacanthus
ENSCANG00000028576	RPUSD1	96	84.133	ENSAMEG00000007461	RPUSD1	90	84.133	Ailuropoda_melanoleuca
ENSCANG00000028576	RPUSD1	99	61.972	ENSACIG00000015863	rpusd1	92	61.972	Amphilophus_citrinellus
ENSCANG00000028576	RPUSD1	90	64.427	ENSAOCG00000021975	rpusd1	79	64.427	Amphiprion_ocellaris
ENSCANG00000028576	RPUSD1	90	64.032	ENSAPEG00000001316	rpusd1	79	64.032	Amphiprion_percula
ENSCANG00000028576	RPUSD1	90	64.822	ENSATEG00000002984	rpusd1	81	64.822	Anabas_testudineus
ENSCANG00000028576	RPUSD1	76	61.111	ENSAPLG00000012316	RPUSD1	87	61.111	Anas_platyrhynchos
ENSCANG00000028576	RPUSD1	92	75.833	ENSACAG00000008953	RPUSD1	84	73.725	Anolis_carolinensis
ENSCANG00000028576	RPUSD1	98	95.620	ENSANAG00000024709	RPUSD1	90	95.374	Aotus_nancymaae
ENSCANG00000028576	RPUSD1	90	65.613	ENSACLG00000013692	rpusd1	81	65.613	Astatotilapia_calliptera
ENSCANG00000028576	RPUSD1	90	64.173	ENSAMXG00000019802	rpusd1	85	64.173	Astyanax_mexicanus
ENSCANG00000028576	RPUSD1	97	89.338	ENSBTAG00000000179	RPUSD1	91	88.612	Bos_taurus
ENSCANG00000028576	RPUSD1	98	94.203	ENSCJAG00000012253	RPUSD1	90	94.306	Callithrix_jacchus
ENSCANG00000028576	RPUSD1	96	86.245	ENSCAFG00000019614	RPUSD1	90	85.978	Canis_familiaris
ENSCANG00000028576	RPUSD1	96	86.245	ENSCAFG00020008891	RPUSD1	90	85.978	Canis_lupus_dingo
ENSCANG00000028576	RPUSD1	97	87.868	ENSCHIG00000012872	RPUSD1	91	87.189	Capra_hircus
ENSCANG00000028576	RPUSD1	100	91.603	ENSTSYG00000036934	RPUSD1	100	91.603	Carlito_syrichta
ENSCANG00000028576	RPUSD1	100	86.121	ENSCAPG00000014219	RPUSD1	92	86.121	Cavia_aperea
ENSCANG00000028576	RPUSD1	100	86.121	ENSCPOG00000034604	RPUSD1	92	86.121	Cavia_porcellus
ENSCANG00000028576	RPUSD1	98	95.290	ENSCCAG00000034385	RPUSD1	90	95.374	Cebus_capucinus
ENSCANG00000028576	RPUSD1	100	99.237	ENSCATG00000042983	RPUSD1	100	99.237	Cercocebus_atys
ENSCANG00000028576	RPUSD1	98	86.861	ENSCLAG00000013966	RPUSD1	92	86.786	Chinchilla_lanigera
ENSCANG00000028576	RPUSD1	100	98.932	ENSCSAG00000012121	RPUSD1	90	98.932	Chlorocebus_sabaeus
ENSCANG00000028576	RPUSD1	92	76.667	ENSCPBG00000021101	RPUSD1	87	70.412	Chrysemys_picta_bellii
ENSCANG00000028576	RPUSD1	100	83.274	ENSCGRG00001014253	Rpusd1	92	83.274	Cricetulus_griseus_chok1gshd
ENSCANG00000028576	RPUSD1	100	83.274	ENSCGRG00000017995	Rpusd1	92	83.274	Cricetulus_griseus_crigri
ENSCANG00000028576	RPUSD1	90	62.598	ENSCSEG00000018512	rpusd1	86	62.598	Cynoglossus_semilaevis
ENSCANG00000028576	RPUSD1	79	73.786	ENSCSEG00000007648	-	100	73.786	Cynoglossus_semilaevis
ENSCANG00000028576	RPUSD1	90	62.055	ENSCVAG00000022746	rpusd1	83	62.055	Cyprinodon_variegatus
ENSCANG00000028576	RPUSD1	89	72.414	ENSDARG00000060192	rpusd1	93	62.182	Danio_rerio
ENSCANG00000028576	RPUSD1	97	85.348	ENSDNOG00000003721	RPUSD1	90	85.053	Dasypus_novemcinctus
ENSCANG00000028576	RPUSD1	93	91.985	ENSDORG00000026656	Rpusd1	92	88.256	Dipodomys_ordii
ENSCANG00000028576	RPUSD1	92	50.000	ENSEBUG00000008767	rpusd1	82	50.000	Eptatretus_burgeri
ENSCANG00000028576	RPUSD1	97	89.377	ENSEASG00005018421	RPUSD1	67	88.612	Equus_asinus_asinus
ENSCANG00000028576	RPUSD1	79	71.845	ENSELUG00000014307	rpusd1	73	59.449	Esox_lucius
ENSCANG00000028576	RPUSD1	100	84.733	ENSFCAG00000010359	RPUSD1	99	84.733	Felis_catus
ENSCANG00000028576	RPUSD1	89	78.448	ENSFALG00000003211	RPUSD1	84	72.157	Ficedula_albicollis
ENSCANG00000028576	RPUSD1	100	86.833	ENSFDAG00000013398	RPUSD1	92	86.833	Fukomys_damarensis
ENSCANG00000028576	RPUSD1	90	62.451	ENSFHEG00000004736	rpusd1	86	60.526	Fundulus_heteroclitus
ENSCANG00000028576	RPUSD1	90	63.241	ENSGMOG00000010756	rpusd1	81	63.241	Gadus_morhua
ENSCANG00000028576	RPUSD1	92	75.000	ENSGALG00000005315	RPUSD1	83	70.588	Gallus_gallus
ENSCANG00000028576	RPUSD1	90	63.241	ENSGAFG00000009886	rpusd1	83	63.241	Gambusia_affinis
ENSCANG00000028576	RPUSD1	89	64.542	ENSGACG00000014276	rpusd1	81	64.542	Gasterosteus_aculeatus
ENSCANG00000028576	RPUSD1	92	76.667	ENSGAGG00000004181	RPUSD1	83	72.549	Gopherus_agassizii
ENSCANG00000028576	RPUSD1	100	96.947	ENSGGOG00000013997	RPUSD1	100	96.947	Gorilla_gorilla
ENSCANG00000028576	RPUSD1	90	65.217	ENSHBUG00000023728	rpusd1	81	65.217	Haplochromis_burtoni
ENSCANG00000028576	RPUSD1	95	88.015	ENSHGLG00000002595	RPUSD1	92	86.121	Heterocephalus_glaber_female
ENSCANG00000028576	RPUSD1	95	88.015	ENSHGLG00100014303	RPUSD1	92	86.121	Heterocephalus_glaber_male
ENSCANG00000028576	RPUSD1	79	77.670	ENSHCOG00000020005	-	97	77.670	Hippocampus_comes
ENSCANG00000028576	RPUSD1	79	77.670	ENSHCOG00000002390	rpusd1	88	66.142	Hippocampus_comes
ENSCANG00000028576	RPUSD1	79	78.641	ENSIPUG00000001570	rpusd1	83	66.535	Ictalurus_punctatus
ENSCANG00000028576	RPUSD1	100	89.680	ENSSTOG00000004276	RPUSD1	92	89.680	Ictidomys_tridecemlineatus
ENSCANG00000028576	RPUSD1	97	88.278	ENSJJAG00000015696	Rpusd1	92	87.900	Jaculus_jaculus
ENSCANG00000028576	RPUSD1	90	62.846	ENSKMAG00000017287	rpusd1	86	60.755	Kryptolebias_marmoratus
ENSCANG00000028576	RPUSD1	90	64.822	ENSLBEG00000022502	rpusd1	81	64.822	Labrus_bergylta
ENSCANG00000028576	RPUSD1	90	64.822	ENSLBEG00000013354	RPUSD1	81	64.822	Labrus_bergylta
ENSCANG00000028576	RPUSD1	91	68.627	ENSLACG00000008869	RPUSD1	84	68.627	Latimeria_chalumnae
ENSCANG00000028576	RPUSD1	79	79.612	ENSLOCG00000005682	rpusd1	99	71.759	Lepisosteus_oculatus
ENSCANG00000028576	RPUSD1	97	86.081	ENSLAFG00000002115	RPUSD1	90	86.081	Loxodonta_africana
ENSCANG00000028576	RPUSD1	100	99.288	ENSMFAG00000003961	RPUSD1	100	99.237	Macaca_fascicularis
ENSCANG00000028576	RPUSD1	100	99.288	ENSMMUG00000000842	RPUSD1	100	99.237	Macaca_mulatta
ENSCANG00000028576	RPUSD1	100	99.288	ENSMNEG00000042712	RPUSD1	100	99.237	Macaca_nemestrina
ENSCANG00000028576	RPUSD1	100	99.288	ENSMLEG00000030591	RPUSD1	100	99.237	Mandrillus_leucophaeus
ENSCANG00000028576	RPUSD1	90	64.427	ENSMAMG00000004735	rpusd1	81	64.427	Mastacembelus_armatus
ENSCANG00000028576	RPUSD1	90	65.613	ENSMZEG00005003214	rpusd1	81	65.613	Maylandia_zebra
ENSCANG00000028576	RPUSD1	89	73.504	ENSMGAG00000005447	RPUSD1	82	70.565	Meleagris_gallopavo
ENSCANG00000028576	RPUSD1	79	93.204	ENSMAUG00000019998	Rpusd1	100	77.068	Mesocricetus_auratus
ENSCANG00000028576	RPUSD1	100	92.366	ENSMICG00000017561	RPUSD1	100	92.366	Microcebus_murinus
ENSCANG00000028576	RPUSD1	97	85.714	ENSMOCG00000014082	Rpusd1	92	85.053	Microtus_ochrogaster
ENSCANG00000028576	RPUSD1	82	72.222	ENSMMOG00000012569	rpusd1	90	64.490	Mola_mola
ENSCANG00000028576	RPUSD1	96	72.527	ENSMODG00000016882	RPUSD1	88	72.894	Monodelphis_domestica
ENSCANG00000028576	RPUSD1	90	65.217	ENSMALG00000017818	rpusd1	81	65.217	Monopterus_albus
ENSCANG00000028576	RPUSD1	97	86.081	MGP_CAROLIEiJ_G0021244	Rpusd1	92	85.053	Mus_caroli
ENSCANG00000028576	RPUSD1	97	86.447	ENSMUSG00000041199	Rpusd1	92	85.409	Mus_musculus
ENSCANG00000028576	RPUSD1	97	85.091	MGP_PahariEiJ_G0023562	Rpusd1	92	84.099	Mus_pahari
ENSCANG00000028576	RPUSD1	97	86.447	MGP_SPRETEiJ_G0022155	Rpusd1	92	85.409	Mus_spretus
ENSCANG00000028576	RPUSD1	94	84.091	ENSMPUG00000015897	RPUSD1	90	83.088	Mustela_putorius_furo
ENSCANG00000028576	RPUSD1	98	87.681	ENSMLUG00000001089	RPUSD1	90	87.900	Myotis_lucifugus
ENSCANG00000028576	RPUSD1	98	87.591	ENSNGAG00000003595	Rpusd1	92	87.544	Nannospalax_galili
ENSCANG00000028576	RPUSD1	78	75.490	ENSNBRG00000006457	rpusd1	82	65.182	Neolamprologus_brichardi
ENSCANG00000028576	RPUSD1	96	74.074	ENSMEUG00000016049	RPUSD1	89	74.074	Notamacropus_eugenii
ENSCANG00000028576	RPUSD1	99	78.700	ENSOPRG00000008340	RPUSD1	93	78.700	Ochotona_princeps
ENSCANG00000028576	RPUSD1	100	85.409	ENSODEG00000016945	RPUSD1	92	85.409	Octodon_degus
ENSCANG00000028576	RPUSD1	90	64.427	ENSONIG00000015672	rpusd1	81	64.427	Oreochromis_niloticus
ENSCANG00000028576	RPUSD1	79	74.757	ENSOANG00000030625	-	79	73.585	Ornithorhynchus_anatinus
ENSCANG00000028576	RPUSD1	88	69.565	ENSORLG00000013009	rpusd1	87	62.642	Oryzias_latipes
ENSCANG00000028576	RPUSD1	88	68.696	ENSORLG00020010382	rpusd1	87	62.264	Oryzias_latipes_hni
ENSCANG00000028576	RPUSD1	94	61.509	ENSORLG00015021354	rpusd1	87	61.509	Oryzias_latipes_hsok
ENSCANG00000028576	RPUSD1	94	66.129	ENSOMEG00000021426	rpusd1	83	64.032	Oryzias_melastigma
ENSCANG00000028576	RPUSD1	98	91.606	ENSOGAG00000003795	RPUSD1	90	91.459	Otolemur_garnettii
ENSCANG00000028576	RPUSD1	97	88.971	ENSOARG00000014254	RPUSD1	91	88.256	Ovis_aries
ENSCANG00000028576	RPUSD1	100	96.441	ENSPPAG00000034797	RPUSD1	100	96.183	Pan_paniscus
ENSCANG00000028576	RPUSD1	100	83.969	ENSPPRG00000012389	RPUSD1	99	83.969	Panthera_pardus
ENSCANG00000028576	RPUSD1	100	83.969	ENSPTIG00000008545	RPUSD1	99	83.969	Panthera_tigris_altaica
ENSCANG00000028576	RPUSD1	100	96.441	ENSPTRG00000007565	RPUSD1	100	96.183	Pan_troglodytes
ENSCANG00000028576	RPUSD1	100	98.577	ENSPANG00000024401	RPUSD1	100	98.473	Papio_anubis
ENSCANG00000028576	RPUSD1	79	78.641	ENSPKIG00000018890	rpusd1	76	65.748	Paramormyrops_kingsleyae
ENSCANG00000028576	RPUSD1	92	77.500	ENSPSIG00000013945	RPUSD1	90	69.343	Pelodiscus_sinensis
ENSCANG00000028576	RPUSD1	90	63.241	ENSPMGG00000014950	rpusd1	86	62.992	Periophthalmus_magnuspinnatus
ENSCANG00000028576	RPUSD1	98	85.766	ENSPEMG00000000497	Rpusd1	92	85.409	Peromyscus_maniculatus_bairdii
ENSCANG00000028576	RPUSD1	89	56.000	ENSPMAG00000001563	rpusd1	81	56.000	Petromyzon_marinus
ENSCANG00000028576	RPUSD1	96	74.721	ENSPCIG00000021216	-	83	74.721	Phascolarctos_cinereus
ENSCANG00000028576	RPUSD1	90	64.427	ENSPFOG00000007946	rpusd1	83	64.427	Poecilia_formosa
ENSCANG00000028576	RPUSD1	90	64.427	ENSPLAG00000011925	rpusd1	83	64.427	Poecilia_latipinna
ENSCANG00000028576	RPUSD1	90	63.636	ENSPMEG00000002910	rpusd1	83	63.636	Poecilia_mexicana
ENSCANG00000028576	RPUSD1	90	64.032	ENSPREG00000019851	rpusd1	83	64.032	Poecilia_reticulata
ENSCANG00000028576	RPUSD1	98	70.182	ENSPCAG00000002258	RPUSD1	91	70.182	Procavia_capensis
ENSCANG00000028576	RPUSD1	100	90.840	ENSPCOG00000022582	RPUSD1	100	90.840	Propithecus_coquereli
ENSCANG00000028576	RPUSD1	98	84.783	ENSPVAG00000013104	RPUSD1	90	85.053	Pteropus_vampyrus
ENSCANG00000028576	RPUSD1	90	65.217	ENSPNYG00000024076	rpusd1	91	64.683	Pundamilia_nyererei
ENSCANG00000028576	RPUSD1	92	62.403	ENSPNAG00000013806	rpusd1	87	62.403	Pygocentrus_nattereri
ENSCANG00000028576	RPUSD1	97	86.813	ENSRNOG00000023639	Rpusd1	92	85.765	Rattus_norvegicus
ENSCANG00000028576	RPUSD1	100	99.644	ENSRBIG00000030238	RPUSD1	100	99.237	Rhinopithecus_bieti
ENSCANG00000028576	RPUSD1	100	99.644	ENSRROG00000036663	RPUSD1	100	99.237	Rhinopithecus_roxellana
ENSCANG00000028576	RPUSD1	94	96.591	ENSSBOG00000033063	RPUSD1	90	95.221	Saimiri_boliviensis_boliviensis
ENSCANG00000028576	RPUSD1	96	73.978	ENSSHAG00000013500	RPUSD1	88	73.978	Sarcophilus_harrisii
ENSCANG00000028576	RPUSD1	98	68.992	ENSSFOG00015014394	rpusd1	84	67.717	Scleropages_formosus
ENSCANG00000028576	RPUSD1	90	64.032	ENSSMAG00000008045	rpusd1	75	64.032	Scophthalmus_maximus
ENSCANG00000028576	RPUSD1	90	67.194	ENSSDUG00000001829	rpusd1	79	67.194	Seriola_dumerili
ENSCANG00000028576	RPUSD1	90	67.194	ENSSLDG00000020853	rpusd1	79	67.194	Seriola_lalandi_dorsalis
ENSCANG00000028576	RPUSD1	59	89.820	ENSSARG00000011187	-	100	89.820	Sorex_araneus
ENSCANG00000028576	RPUSD1	51	61.806	ENSSPUG00000005119	-	75	61.806	Sphenodon_punctatus
ENSCANG00000028576	RPUSD1	90	64.822	ENSSPAG00000012708	rpusd1	81	64.822	Stegastes_partitus
ENSCANG00000028576	RPUSD1	98	87.226	ENSSSCG00000008000	RPUSD1	98	89.764	Sus_scrofa
ENSCANG00000028576	RPUSD1	92	76.667	ENSTGUG00000015375	RPUSD1	100	72.157	Taeniopygia_guttata
ENSCANG00000028576	RPUSD1	78	75.490	ENSTRUG00000003041	rpusd1	83	62.452	Takifugu_rubripes
ENSCANG00000028576	RPUSD1	78	75.490	ENSTNIG00000002660	rpusd1	92	61.265	Tetraodon_nigroviridis
ENSCANG00000028576	RPUSD1	97	88.278	ENSTTRG00000010167	RPUSD1	90	87.900	Tursiops_truncatus
ENSCANG00000028576	RPUSD1	96	84.387	ENSUAMG00000012736	RPUSD1	90	84.133	Ursus_americanus
ENSCANG00000028576	RPUSD1	96	84.387	ENSUMAG00000021174	RPUSD1	99	81.227	Ursus_maritimus
ENSCANG00000028576	RPUSD1	95	85.019	ENSVVUG00000012357	RPUSD1	88	85.019	Vulpes_vulpes
ENSCANG00000028576	RPUSD1	83	77.982	ENSXETG00000007184	rpusd1	87	65.660	Xenopus_tropicalis
ENSCANG00000028576	RPUSD1	90	62.846	ENSXCOG00000017930	rpusd1	77	68.932	Xiphophorus_couchianus
ENSCANG00000028576	RPUSD1	90	63.636	ENSXMAG00000024084	rpusd1	83	63.636	Xiphophorus_maculatus