EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000028632 (Gene tree)
Gene ID: 105523540
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC105523540
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Minus strand
Length: 46666 bases
Position: chrKN979530.1:787388-834053
Accession: 105523540
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000010466	RNA_pol_L_2	PF13656.6	6.2e-28	1	1
ENSCANP00000010466	RNA_pol_L	PF01193.24	1.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000033323	-	2195	XM_011958396	ENSCANP00000010435	94 (aa)	XP_011813786	A0A2K5I1D4
ENSCANT00000033344	-	129	-	ENSCANP00000010456	42 (aa)	-	A0A2K5I1M9
ENSCANT00000033354	-	1604	XM_011958374	ENSCANP00000010466	133 (aa)	XP_011813764	A0A2K5I1N9
ENSCANT00000033338	-	2020	XM_011958388	ENSCANP00000010450	122 (aa)	XP_011813778	A0A2K5I1E6

Gene Model

Click here to download ENSCANG00000028632's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000028632's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000028632	-	100	93.985	ENSCANG00000037694	-	100	93.985

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000028632	-	100	98.496	ENSG00000186184	POLR1D	100	99.138	Homo_sapiens
ENSCANG00000028632	-	83	67.568	ENSAPOG00000021882	polr1d	98	67.568	Acanthochromis_polyacanthus
ENSCANG00000028632	-	94	96.800	ENSAMEG00000019095	POLR1D	100	96.800	Ailuropoda_melanoleuca
ENSCANG00000028632	-	80	70.370	ENSACIG00000013328	polr1d	94	70.370	Amphilophus_citrinellus
ENSCANG00000028632	-	84	66.964	ENSAOCG00000018500	polr1d	98	66.964	Amphiprion_ocellaris
ENSCANG00000028632	-	84	66.071	ENSAPEG00000009489	polr1d	98	66.071	Amphiprion_percula
ENSCANG00000028632	-	80	67.290	ENSATEG00000019322	polr1d	94	67.290	Anabas_testudineus
ENSCANG00000028632	-	83	65.766	ENSACAG00000015753	POLR1D	96	65.766	Anolis_carolinensis
ENSCANG00000028632	-	100	96.992	ENSANAG00000024486	POLR1D	100	96.992	Aotus_nancymaae
ENSCANG00000028632	-	77	74.510	ENSACLG00000023805	polr1d	94	71.028	Astatotilapia_calliptera
ENSCANG00000028632	-	78	70.192	ENSAMXG00000036118	polr1d	90	70.192	Astyanax_mexicanus
ENSCANG00000028632	-	100	93.233	ENSBTAG00000008642	POLR1D	100	93.233	Bos_taurus
ENSCANG00000028632	-	100	93.233	ENSBTAG00000033252	-	100	93.233	Bos_taurus
ENSCANG00000028632	-	62	37.805	WBGene00010230	rpac-19	57	37.805	Caenorhabditis_elegans
ENSCANG00000028632	-	100	96.241	ENSCJAG00000044669	POLR1D	100	96.241	Callithrix_jacchus
ENSCANG00000028632	-	100	96.992	ENSCAFG00000006755	POLR1D	100	96.992	Canis_familiaris
ENSCANG00000028632	-	100	93.985	ENSCHIG00000021910	POLR1D	100	93.985	Capra_hircus
ENSCANG00000028632	-	96	83.077	ENSTSYG00000034852	-	96	85.345	Carlito_syrichta
ENSCANG00000028632	-	93	92.742	ENSTSYG00000026817	-	93	92.742	Carlito_syrichta
ENSCANG00000028632	-	96	53.125	ENSCAPG00000006058	-	99	53.125	Cavia_aperea
ENSCANG00000028632	-	96	53.906	ENSCPOG00000030450	-	99	53.906	Cavia_porcellus
ENSCANG00000028632	-	100	96.241	ENSCCAG00000021349	-	100	96.241	Cebus_capucinus
ENSCANG00000028632	-	100	77.444	ENSCCAG00000020191	-	100	77.444	Cebus_capucinus
ENSCANG00000028632	-	100	98.496	ENSCATG00000030710	-	100	98.496	Cercocebus_atys
ENSCANG00000028632	-	100	86.466	ENSCATG00000022900	-	100	86.466	Cercocebus_atys
ENSCANG00000028632	-	93	95.161	ENSCLAG00000017623	POLR1D	100	95.161	Chinchilla_lanigera
ENSCANG00000028632	-	73	78.351	ENSCPBG00000004719	POLR1D	96	78.351	Chrysemys_picta_bellii
ENSCANG00000028632	-	100	95.489	ENSCGRG00001021251	Polr1d	100	95.489	Cricetulus_griseus_chok1gshd
ENSCANG00000028632	-	100	95.489	ENSCGRG00000011639	Polr1d	100	95.489	Cricetulus_griseus_crigri
ENSCANG00000028632	-	78	70.192	ENSCSEG00000018268	polr1d	91	69.159	Cynoglossus_semilaevis
ENSCANG00000028632	-	79	71.429	ENSCVAG00000018527	polr1d	92	71.429	Cyprinodon_variegatus
ENSCANG00000028632	-	83	66.364	ENSDARG00000037570	polr1d	98	66.364	Danio_rerio
ENSCANG00000028632	-	100	94.737	ENSDNOG00000043676	-	100	94.737	Dasypus_novemcinctus
ENSCANG00000028632	-	100	92.537	ENSDNOG00000046247	-	100	92.537	Dasypus_novemcinctus
ENSCANG00000028632	-	100	93.985	ENSDORG00000029155	Polr1d	100	93.985	Dipodomys_ordii
ENSCANG00000028632	-	65	43.023	FBgn0086447	l(2)37Cg	81	43.023	Drosophila_melanogaster
ENSCANG00000028632	-	93	90.323	ENSETEG00000012797	POLR1D	100	90.323	Echinops_telfairi
ENSCANG00000028632	-	65	72.093	ENSEBUG00000011748	polr1d	60	72.093	Eptatretus_burgeri
ENSCANG00000028632	-	96	96.094	ENSEASG00005022487	POLR1D	99	96.094	Equus_asinus_asinus
ENSCANG00000028632	-	93	95.161	ENSEEUG00000013144	POLR1D	100	95.161	Erinaceus_europaeus
ENSCANG00000028632	-	80	67.925	ENSELUG00000005105	rpac2	93	67.925	Esox_lucius
ENSCANG00000028632	-	100	96.992	ENSFCAG00000030162	POLR1D	100	96.992	Felis_catus
ENSCANG00000028632	-	72	76.042	ENSFALG00000011463	POLR1D	95	76.042	Ficedula_albicollis
ENSCANG00000028632	-	100	95.489	ENSFDAG00000004463	POLR1D	100	95.489	Fukomys_damarensis
ENSCANG00000028632	-	80	72.642	ENSFHEG00000015410	polr1d	92	72.642	Fundulus_heteroclitus
ENSCANG00000028632	-	79	72.381	ENSGAFG00000001693	polr1d	92	72.381	Gambusia_affinis
ENSCANG00000028632	-	86	67.826	ENSGACG00000018585	polr1d	97	67.826	Gasterosteus_aculeatus
ENSCANG00000028632	-	81	76.852	ENSGAGG00000008503	POLR1D	95	76.852	Gopherus_agassizii
ENSCANG00000028632	-	100	98.496	ENSGGOG00000004235	POLR1D	100	98.496	Gorilla_gorilla
ENSCANG00000028632	-	80	71.028	ENSHBUG00000002111	polr1d	94	71.028	Haplochromis_burtoni
ENSCANG00000028632	-	100	93.985	ENSHGLG00000003202	POLR1D	100	93.985	Heterocephalus_glaber_female
ENSCANG00000028632	-	100	93.985	ENSHGLG00100009393	POLR1D	100	93.985	Heterocephalus_glaber_male
ENSCANG00000028632	-	80	69.159	ENSHCOG00000003258	polr1d	94	69.159	Hippocampus_comes
ENSCANG00000028632	-	79	73.333	ENSIPUG00000014810	polr1d	91	73.333	Ictalurus_punctatus
ENSCANG00000028632	-	100	97.744	ENSSTOG00000013877	POLR1D	100	97.744	Ictidomys_tridecemlineatus
ENSCANG00000028632	-	95	74.603	ENSJJAG00000021667	-	75	74.603	Jaculus_jaculus
ENSCANG00000028632	-	97	89.474	ENSJJAG00000022671	-	100	92.500	Jaculus_jaculus
ENSCANG00000028632	-	80	66.981	ENSKMAG00000015256	polr1d	93	66.981	Kryptolebias_marmoratus
ENSCANG00000028632	-	79	72.381	ENSLBEG00000015919	polr1d	92	72.381	Labrus_bergylta
ENSCANG00000028632	-	87	64.655	ENSLACG00000006810	POLR1D	96	64.655	Latimeria_chalumnae
ENSCANG00000028632	-	53	77.143	ENSLOCG00000014976	polr1d	95	77.143	Lepisosteus_oculatus
ENSCANG00000028632	-	100	89.474	ENSLAFG00000032290	POLR1D	100	89.474	Loxodonta_africana
ENSCANG00000028632	-	94	98.400	ENSMFAG00000045264	POLR1D	97	98.400	Macaca_fascicularis
ENSCANG00000028632	-	100	78.195	ENSMMUG00000041570	-	100	78.195	Macaca_mulatta
ENSCANG00000028632	-	87	100.000	ENSMMUG00000020386	POLR1D	100	100.000	Macaca_mulatta
ENSCANG00000028632	-	100	99.248	ENSMNEG00000008630	-	100	99.248	Macaca_nemestrina
ENSCANG00000028632	-	100	81.203	ENSMNEG00000038120	-	100	81.203	Macaca_nemestrina
ENSCANG00000028632	-	100	99.248	ENSMLEG00000041048	-	100	99.248	Mandrillus_leucophaeus
ENSCANG00000028632	-	100	87.218	ENSMLEG00000032251	-	100	87.218	Mandrillus_leucophaeus
ENSCANG00000028632	-	76	71.287	ENSMAMG00000014834	polr1d	94	71.287	Mastacembelus_armatus
ENSCANG00000028632	-	77	74.510	ENSMZEG00005006638	polr1d	90	74.510	Maylandia_zebra
ENSCANG00000028632	-	69	78.261	ENSMGAG00000005322	POLR1D	84	78.261	Meleagris_gallopavo
ENSCANG00000028632	-	100	94.737	ENSMAUG00000001946	Polr1d	100	94.737	Mesocricetus_auratus
ENSCANG00000028632	-	100	95.489	ENSMICG00000016883	-	100	95.489	Microcebus_murinus
ENSCANG00000028632	-	99	78.788	ENSMICG00000007349	-	100	78.788	Microcebus_murinus
ENSCANG00000028632	-	99	94.697	ENSMOCG00000021288	Polr1d	99	94.697	Microtus_ochrogaster
ENSCANG00000028632	-	80	68.224	ENSMMOG00000009605	polr1d	94	68.224	Mola_mola
ENSCANG00000028632	-	80	84.906	ENSMODG00000023881	POLR1D	93	84.906	Monodelphis_domestica
ENSCANG00000028632	-	80	67.290	ENSMALG00000010652	polr1d	94	67.290	Monopterus_albus
ENSCANG00000028632	-	100	88.722	MGP_CAROLIEiJ_G0028034	Polr1d	100	88.722	Mus_caroli
ENSCANG00000028632	-	100	88.722	ENSMUSG00000029642	Polr1d	100	88.722	Mus_musculus
ENSCANG00000028632	-	100	87.970	MGP_PahariEiJ_G0024600	Polr1d	100	87.970	Mus_pahari
ENSCANG00000028632	-	100	89.474	MGP_SPRETEiJ_G0029032	Polr1d	100	89.474	Mus_spretus
ENSCANG00000028632	-	100	94.737	ENSMLUG00000027169	-	100	94.737	Myotis_lucifugus
ENSCANG00000028632	-	99	86.364	ENSMLUG00000004118	-	99	86.364	Myotis_lucifugus
ENSCANG00000028632	-	87	95.690	ENSNGAG00000006014	Polr1d	100	95.690	Nannospalax_galili
ENSCANG00000028632	-	80	71.028	ENSNBRG00000020327	polr1d	94	71.028	Neolamprologus_brichardi
ENSCANG00000028632	-	100	98.496	ENSNLEG00000000358	POLR1D	100	98.496	Nomascus_leucogenys
ENSCANG00000028632	-	100	93.985	ENSODEG00000005294	-	100	93.985	Octodon_degus
ENSCANG00000028632	-	100	79.699	ENSODEG00000014801	-	100	79.699	Octodon_degus
ENSCANG00000028632	-	79	81.905	ENSOANG00000008708	-	97	81.905	Ornithorhynchus_anatinus
ENSCANG00000028632	-	100	94.737	ENSOCUG00000015706	POLR1D	82	94.737	Oryctolagus_cuniculus
ENSCANG00000028632	-	80	68.224	ENSORLG00000010257	polr1d	94	68.224	Oryzias_latipes
ENSCANG00000028632	-	83	66.667	ENSORLG00020000533	polr1d	75	66.667	Oryzias_latipes_hni
ENSCANG00000028632	-	85	67.257	ENSORLG00015013267	polr1d	75	67.257	Oryzias_latipes_hsok
ENSCANG00000028632	-	86	66.957	ENSOMEG00000014912	polr1d	77	66.957	Oryzias_melastigma
ENSCANG00000028632	-	100	95.489	ENSOGAG00000014601	POLR1D	100	95.489	Otolemur_garnettii
ENSCANG00000028632	-	94	93.600	ENSOARG00000017005	POLR1D	96	93.600	Ovis_aries
ENSCANG00000028632	-	100	96.992	ENSPPAG00000028138	POLR1D	100	96.992	Pan_paniscus
ENSCANG00000028632	-	99	96.970	ENSPPRG00000003381	POLR1D	99	96.970	Panthera_pardus
ENSCANG00000028632	-	93	96.774	ENSPTIG00000018137	POLR1D	93	96.774	Panthera_tigris_altaica
ENSCANG00000028632	-	100	98.496	ENSPTRG00000005734	POLR1D	100	98.496	Pan_troglodytes
ENSCANG00000028632	-	100	99.248	ENSPANG00000020259	-	100	99.248	Papio_anubis
ENSCANG00000028632	-	100	86.466	ENSPANG00000035051	-	100	86.466	Papio_anubis
ENSCANG00000028632	-	86	63.478	ENSPKIG00000021891	polr1d	90	53.097	Paramormyrops_kingsleyae
ENSCANG00000028632	-	83	74.775	ENSPSIG00000011822	POLR1D	86	74.775	Pelodiscus_sinensis
ENSCANG00000028632	-	93	56.000	ENSPMGG00000012998	POLR1D	93	56.000	Periophthalmus_magnuspinnatus
ENSCANG00000028632	-	84	66.071	ENSPMGG00000010359	polr1d	97	66.071	Periophthalmus_magnuspinnatus
ENSCANG00000028632	-	100	91.729	ENSPEMG00000006336	-	100	91.729	Peromyscus_maniculatus_bairdii
ENSCANG00000028632	-	82	59.633	ENSPMAG00000004228	polr1d	92	59.633	Petromyzon_marinus
ENSCANG00000028632	-	80	84.906	ENSPCIG00000001673	POLR1D	93	84.906	Phascolarctos_cinereus
ENSCANG00000028632	-	79	72.381	ENSPFOG00000023343	polr1d	92	73.750	Poecilia_formosa
ENSCANG00000028632	-	79	72.381	ENSPLAG00000009675	polr1d	92	72.381	Poecilia_latipinna
ENSCANG00000028632	-	79	72.381	ENSPMEG00000004628	polr1d	92	72.381	Poecilia_mexicana
ENSCANG00000028632	-	79	72.381	ENSPREG00000022032	polr1d	92	72.381	Poecilia_reticulata
ENSCANG00000028632	-	100	95.489	ENSPCOG00000028175	POLR1D	100	95.489	Propithecus_coquereli
ENSCANG00000028632	-	80	71.028	ENSPNYG00000000107	polr1d	94	71.028	Pundamilia_nyererei
ENSCANG00000028632	-	76	67.327	ENSPNAG00000001512	polr1d	87	66.346	Pygocentrus_nattereri
ENSCANG00000028632	-	100	93.985	ENSRBIG00000000336	-	100	93.985	Rhinopithecus_bieti
ENSCANG00000028632	-	100	99.248	ENSRBIG00000036378	-	100	99.248	Rhinopithecus_bieti
ENSCANG00000028632	-	100	99.248	ENSRROG00000042232	-	100	99.248	Rhinopithecus_roxellana
ENSCANG00000028632	-	100	93.985	ENSRROG00000026751	-	100	93.985	Rhinopithecus_roxellana
ENSCANG00000028632	-	89	45.378	YNL113W	RPC19	84	45.378	Saccharomyces_cerevisiae
ENSCANG00000028632	-	100	96.992	ENSSBOG00000028482	-	100	96.992	Saimiri_boliviensis_boliviensis
ENSCANG00000028632	-	86	90.351	ENSSBOG00000030146	-	84	90.351	Saimiri_boliviensis_boliviensis
ENSCANG00000028632	-	86	78.070	ENSSHAG00000001190	POLR1D	88	78.070	Sarcophilus_harrisii
ENSCANG00000028632	-	82	73.394	ENSSFOG00015011375	polr1d	96	73.394	Scleropages_formosus
ENSCANG00000028632	-	80	68.224	ENSSMAG00000011861	polr1d	94	68.224	Scophthalmus_maximus
ENSCANG00000028632	-	80	67.290	ENSSDUG00000011930	polr1d	94	67.290	Seriola_dumerili
ENSCANG00000028632	-	86	63.478	ENSSLDG00000023871	polr1d	97	63.478	Seriola_lalandi_dorsalis
ENSCANG00000028632	-	100	95.489	ENSSARG00000007840	POLR1D	100	95.489	Sorex_araneus
ENSCANG00000028632	-	79	76.190	ENSSPUG00000005786	POLR1D	95	72.973	Sphenodon_punctatus
ENSCANG00000028632	-	79	72.381	ENSSPAG00000011764	polr1d	92	72.381	Stegastes_partitus
ENSCANG00000028632	-	100	94.737	ENSSSCG00000009310	POLR1D	100	94.737	Sus_scrofa
ENSCANG00000028632	-	72	76.042	ENSTGUG00000005450	POLR1D	100	76.042	Taeniopygia_guttata
ENSCANG00000028632	-	78	65.385	ENSTRUG00000019741	polr1d	91	65.385	Takifugu_rubripes
ENSCANG00000028632	-	93	94.355	ENSTBEG00000007006	POLR1D	100	94.355	Tupaia_belangeri
ENSCANG00000028632	-	100	96.992	ENSUAMG00000011413	POLR1D	100	96.992	Ursus_americanus
ENSCANG00000028632	-	93	96.774	ENSUMAG00000016968	POLR1D	97	96.774	Ursus_maritimus
ENSCANG00000028632	-	100	96.992	ENSVVUG00000009216	POLR1D	100	96.992	Vulpes_vulpes
ENSCANG00000028632	-	74	75.510	ENSXCOG00000011731	polr1d	75	75.510	Xiphophorus_couchianus
ENSCANG00000028632	-	74	75.510	ENSXMAG00000017538	polr1d	75	75.510	Xiphophorus_maculatus