EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCANG00000028699 (Gene tree)
Gene ID: 105505166
Gene Symbol: EDC3
Alias: FLJ21128|LSM16|YJDC|YJEFN2|hYjeF_N2-15q23
Full Name: enhancer of mRNA decapping 3
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 61088 bases
Position: chrKN985978.1:3606918-3668005
Accession: 105505166
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000010597	FDF	PF09532.10	1.1e-18	1	1
ENSCANP00000010597	LSM14	PF12701.7	9.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000033485	EDC3-201	3746	XM_011932899	ENSCANP00000010597	508 (aa)	XP_011788289	A0A2K5I247

Gene Model

Click here to download ENSCANG00000028699's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000028699's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000028699	EDC3	100	98.622	ENSG00000179151	EDC3	100	100.000	Homo_sapiens
ENSCANG00000028699	EDC3	100	69.804	ENSAPOG00000010791	edc3	100	69.804	Acanthochromis_polyacanthus
ENSCANG00000028699	EDC3	100	55.922	ENSAPOG00000008655	EDC3	100	55.922	Acanthochromis_polyacanthus
ENSCANG00000028699	EDC3	100	96.457	ENSAMEG00000008963	EDC3	100	96.457	Ailuropoda_melanoleuca
ENSCANG00000028699	EDC3	100	68.762	ENSACIG00000017751	edc3	100	68.762	Amphilophus_citrinellus
ENSCANG00000028699	EDC3	99	59.454	ENSACIG00000005330	EDC3	99	59.454	Amphilophus_citrinellus
ENSCANG00000028699	EDC3	100	69.804	ENSAOCG00000005431	edc3	100	69.804	Amphiprion_ocellaris
ENSCANG00000028699	EDC3	100	58.333	ENSAOCG00000009103	-	100	58.333	Amphiprion_ocellaris
ENSCANG00000028699	EDC3	100	69.804	ENSAPEG00000000968	edc3	100	69.804	Amphiprion_percula
ENSCANG00000028699	EDC3	100	58.333	ENSAPEG00000007841	EDC3	100	58.333	Amphiprion_percula
ENSCANG00000028699	EDC3	100	70.138	ENSATEG00000015505	edc3	100	70.138	Anabas_testudineus
ENSCANG00000028699	EDC3	100	58.476	ENSATEG00000004205	-	100	58.476	Anabas_testudineus
ENSCANG00000028699	EDC3	90	87.473	ENSAPLG00000008957	EDC3	100	87.473	Anas_platyrhynchos
ENSCANG00000028699	EDC3	78	87.657	ENSACAG00000000460	-	100	87.657	Anolis_carolinensis
ENSCANG00000028699	EDC3	100	98.819	ENSANAG00000024078	EDC3	100	98.819	Aotus_nancymaae
ENSCANG00000028699	EDC3	99	58.285	ENSACLG00000018776	-	99	58.285	Astatotilapia_calliptera
ENSCANG00000028699	EDC3	100	68.369	ENSACLG00000007232	edc3	100	68.369	Astatotilapia_calliptera
ENSCANG00000028699	EDC3	100	70.623	ENSAMXG00000001589	edc3	100	70.623	Astyanax_mexicanus
ENSCANG00000028699	EDC3	100	97.047	ENSBTAG00000007308	EDC3	100	97.047	Bos_taurus
ENSCANG00000028699	EDC3	100	98.819	ENSCJAG00000017681	EDC3	100	98.819	Callithrix_jacchus
ENSCANG00000028699	EDC3	100	97.244	ENSCAFG00000017935	EDC3	100	97.244	Canis_familiaris
ENSCANG00000028699	EDC3	100	97.244	ENSCAFG00020003909	EDC3	100	97.244	Canis_lupus_dingo
ENSCANG00000028699	EDC3	100	96.850	ENSCHIG00000023658	EDC3	100	96.850	Capra_hircus
ENSCANG00000028699	EDC3	100	97.244	ENSTSYG00000004822	EDC3	100	97.244	Carlito_syrichta
ENSCANG00000028699	EDC3	100	96.063	ENSCPOG00000015595	EDC3	100	96.063	Cavia_porcellus
ENSCANG00000028699	EDC3	100	99.213	ENSCCAG00000021663	EDC3	100	99.213	Cebus_capucinus
ENSCANG00000028699	EDC3	100	100.000	ENSCATG00000037511	EDC3	100	100.000	Cercocebus_atys
ENSCANG00000028699	EDC3	100	95.866	ENSCLAG00000005700	EDC3	100	95.866	Chinchilla_lanigera
ENSCANG00000028699	EDC3	100	100.000	ENSCSAG00000014239	EDC3	100	100.000	Chlorocebus_sabaeus
ENSCANG00000028699	EDC3	100	89.370	ENSCPBG00000024239	EDC3	100	89.370	Chrysemys_picta_bellii
ENSCANG00000028699	EDC3	100	38.654	ENSCING00000022142	-	99	38.654	Ciona_intestinalis
ENSCANG00000028699	EDC3	100	97.441	ENSCGRG00001013874	Edc3	100	97.441	Cricetulus_griseus_chok1gshd
ENSCANG00000028699	EDC3	100	97.441	ENSCGRG00000011885	Edc3	100	97.441	Cricetulus_griseus_crigri
ENSCANG00000028699	EDC3	99	69.488	ENSCSEG00000012996	edc3	99	69.488	Cynoglossus_semilaevis
ENSCANG00000028699	EDC3	100	68.566	ENSCVAG00000008023	edc3	100	68.566	Cyprinodon_variegatus
ENSCANG00000028699	EDC3	99	69.006	ENSDARG00000051931	edc3	99	69.006	Danio_rerio
ENSCANG00000028699	EDC3	100	85.465	ENSDNOG00000030661	EDC3	100	85.465	Dasypus_novemcinctus
ENSCANG00000028699	EDC3	64	98.148	ENSETEG00000002398	-	64	98.148	Echinops_telfairi
ENSCANG00000028699	EDC3	100	97.835	ENSEASG00005005071	EDC3	100	97.835	Equus_asinus_asinus
ENSCANG00000028699	EDC3	100	97.835	ENSECAG00000017994	EDC3	100	97.835	Equus_caballus
ENSCANG00000028699	EDC3	100	65.887	ENSELUG00000005794	edc3	100	65.887	Esox_lucius
ENSCANG00000028699	EDC3	100	62.427	ENSELUG00000007607	EDC3	100	62.427	Esox_lucius
ENSCANG00000028699	EDC3	100	96.654	ENSFCAG00000002014	EDC3	100	96.654	Felis_catus
ENSCANG00000028699	EDC3	98	85.170	ENSFALG00000004543	EDC3	96	85.170	Ficedula_albicollis
ENSCANG00000028699	EDC3	100	96.260	ENSFDAG00000012582	EDC3	100	96.260	Fukomys_damarensis
ENSCANG00000028699	EDC3	100	69.412	ENSFHEG00000009375	edc3	100	69.412	Fundulus_heteroclitus
ENSCANG00000028699	EDC3	100	68.555	ENSGMOG00000002715	edc3	100	68.555	Gadus_morhua
ENSCANG00000028699	EDC3	100	88.976	ENSGALG00000040181	EDC3	100	88.976	Gallus_gallus
ENSCANG00000028699	EDC3	100	67.976	ENSGAFG00000014433	edc3	100	67.976	Gambusia_affinis
ENSCANG00000028699	EDC3	99	55.278	ENSGACG00000014671	EDC3	99	56.311	Gasterosteus_aculeatus
ENSCANG00000028699	EDC3	100	68.762	ENSGACG00000009783	edc3	100	68.762	Gasterosteus_aculeatus
ENSCANG00000028699	EDC3	100	88.976	ENSGAGG00000023477	EDC3	100	88.976	Gopherus_agassizii
ENSCANG00000028699	EDC3	100	98.819	ENSGGOG00000003552	EDC3	100	98.819	Gorilla_gorilla
ENSCANG00000028699	EDC3	99	58.285	ENSHBUG00000020817	EDC3	99	58.285	Haplochromis_burtoni
ENSCANG00000028699	EDC3	100	68.369	ENSHBUG00000003635	edc3	100	68.369	Haplochromis_burtoni
ENSCANG00000028699	EDC3	100	67.969	ENSHCOG00000016834	edc3	100	68.102	Hippocampus_comes
ENSCANG00000028699	EDC3	99	69.745	ENSIPUG00000005695	edc3	100	69.745	Ictalurus_punctatus
ENSCANG00000028699	EDC3	100	98.031	ENSSTOG00000013936	EDC3	100	98.031	Ictidomys_tridecemlineatus
ENSCANG00000028699	EDC3	100	95.669	ENSJJAG00000008074	Edc3	100	95.669	Jaculus_jaculus
ENSCANG00000028699	EDC3	100	55.750	ENSKMAG00000001987	EDC3	100	55.750	Kryptolebias_marmoratus
ENSCANG00000028699	EDC3	100	68.959	ENSKMAG00000001243	edc3	100	68.885	Kryptolebias_marmoratus
ENSCANG00000028699	EDC3	100	57.965	ENSLBEG00000017984	EDC3	100	57.965	Labrus_bergylta
ENSCANG00000028699	EDC3	100	69.608	ENSLBEG00000013435	edc3	99	69.608	Labrus_bergylta
ENSCANG00000028699	EDC3	100	77.864	ENSLACG00000014149	EDC3	100	77.864	Latimeria_chalumnae
ENSCANG00000028699	EDC3	99	67.446	ENSLOCG00000014625	edc3	99	67.641	Lepisosteus_oculatus
ENSCANG00000028699	EDC3	100	95.472	ENSLAFG00000002992	EDC3	100	95.472	Loxodonta_africana
ENSCANG00000028699	EDC3	100	99.606	ENSMFAG00000043074	EDC3	100	99.606	Macaca_fascicularis
ENSCANG00000028699	EDC3	100	99.606	ENSMMUG00000011071	EDC3	100	99.606	Macaca_mulatta
ENSCANG00000028699	EDC3	100	99.606	ENSMNEG00000035316	EDC3	100	99.606	Macaca_nemestrina
ENSCANG00000028699	EDC3	100	100.000	ENSMLEG00000030372	EDC3	100	100.000	Mandrillus_leucophaeus
ENSCANG00000028699	EDC3	100	70.138	ENSMAMG00000000505	edc3	100	70.138	Mastacembelus_armatus
ENSCANG00000028699	EDC3	99	56.445	ENSMAMG00000005423	-	99	56.445	Mastacembelus_armatus
ENSCANG00000028699	EDC3	100	68.369	ENSMZEG00005004892	edc3	100	68.369	Maylandia_zebra
ENSCANG00000028699	EDC3	99	58.789	ENSMZEG00005005654	EDC3	99	59.375	Maylandia_zebra
ENSCANG00000028699	EDC3	100	87.992	ENSMGAG00000002617	EDC3	100	87.992	Meleagris_gallopavo
ENSCANG00000028699	EDC3	100	97.244	ENSMICG00000043190	EDC3	100	97.244	Microcebus_murinus
ENSCANG00000028699	EDC3	100	97.441	ENSMOCG00000016205	Edc3	100	97.441	Microtus_ochrogaster
ENSCANG00000028699	EDC3	99	69.155	ENSMMOG00000012278	edc3	99	69.291	Mola_mola
ENSCANG00000028699	EDC3	100	93.307	ENSMODG00000009442	EDC3	100	93.307	Monodelphis_domestica
ENSCANG00000028699	EDC3	100	69.745	ENSMALG00000008658	edc3	100	69.745	Monopterus_albus
ENSCANG00000028699	EDC3	100	96.457	MGP_CAROLIEiJ_G0032280	Edc3	100	98.462	Mus_caroli
ENSCANG00000028699	EDC3	100	96.063	ENSMUSG00000038957	Edc3	100	98.462	Mus_musculus
ENSCANG00000028699	EDC3	100	96.654	MGP_PahariEiJ_G0015146	Edc3	100	98.462	Mus_pahari
ENSCANG00000028699	EDC3	100	95.866	MGP_SPRETEiJ_G0033420	Edc3	100	98.462	Mus_spretus
ENSCANG00000028699	EDC3	100	96.457	ENSMPUG00000017293	EDC3	100	96.457	Mustela_putorius_furo
ENSCANG00000028699	EDC3	100	97.059	ENSMLUG00000016382	EDC3	100	97.059	Myotis_lucifugus
ENSCANG00000028699	EDC3	100	96.654	ENSNGAG00000010923	Edc3	100	96.654	Nannospalax_galili
ENSCANG00000028699	EDC3	100	68.173	ENSNBRG00000002434	edc3	100	68.173	Neolamprologus_brichardi
ENSCANG00000028699	EDC3	99	59.375	ENSNBRG00000007881	EDC3	99	59.375	Neolamprologus_brichardi
ENSCANG00000028699	EDC3	100	89.173	ENSNLEG00000014577	EDC3	100	89.173	Nomascus_leucogenys
ENSCANG00000028699	EDC3	100	92.126	ENSMEUG00000009077	EDC3	100	92.126	Notamacropus_eugenii
ENSCANG00000028699	EDC3	79	96.296	ENSOPRG00000009540	-	79	96.296	Ochotona_princeps
ENSCANG00000028699	EDC3	100	68.566	ENSONIG00000008434	edc3	100	68.566	Oreochromis_niloticus
ENSCANG00000028699	EDC3	99	60.039	ENSONIG00000002932	-	99	60.039	Oreochromis_niloticus
ENSCANG00000028699	EDC3	78	91.940	ENSOCUG00000017740	EDC3	86	91.940	Oryctolagus_cuniculus
ENSCANG00000028699	EDC3	100	56.641	ENSORLG00000014399	-	98	56.641	Oryzias_latipes
ENSCANG00000028699	EDC3	100	67.780	ENSORLG00000004883	edc3	100	67.780	Oryzias_latipes
ENSCANG00000028699	EDC3	100	67.387	ENSORLG00020012262	edc3	100	67.387	Oryzias_latipes_hni
ENSCANG00000028699	EDC3	100	56.641	ENSORLG00020019446	-	100	56.641	Oryzias_latipes_hni
ENSCANG00000028699	EDC3	100	56.250	ENSORLG00015017635	-	96	56.250	Oryzias_latipes_hsok
ENSCANG00000028699	EDC3	100	67.578	ENSORLG00015005634	edc3	100	67.578	Oryzias_latipes_hsok
ENSCANG00000028699	EDC3	100	68.945	ENSOMEG00000014026	edc3	100	68.945	Oryzias_melastigma
ENSCANG00000028699	EDC3	100	56.641	ENSOMEG00000017354	EDC3	100	56.641	Oryzias_melastigma
ENSCANG00000028699	EDC3	100	97.638	ENSOGAG00000014441	EDC3	100	97.638	Otolemur_garnettii
ENSCANG00000028699	EDC3	100	96.464	ENSOARG00000003476	EDC3	100	96.464	Ovis_aries
ENSCANG00000028699	EDC3	100	98.819	ENSPPAG00000040143	EDC3	100	98.819	Pan_paniscus
ENSCANG00000028699	EDC3	100	97.047	ENSPPRG00000006257	EDC3	100	97.047	Panthera_pardus
ENSCANG00000028699	EDC3	100	97.047	ENSPTIG00000017424	EDC3	100	97.047	Panthera_tigris_altaica
ENSCANG00000028699	EDC3	100	98.819	ENSPTRG00000007279	EDC3	100	98.819	Pan_troglodytes
ENSCANG00000028699	EDC3	100	100.000	ENSPANG00000015997	EDC3	100	100.000	Papio_anubis
ENSCANG00000028699	EDC3	100	66.211	ENSPKIG00000019810	EDC3	100	66.211	Paramormyrops_kingsleyae
ENSCANG00000028699	EDC3	100	68.555	ENSPKIG00000004416	edc3	100	69.531	Paramormyrops_kingsleyae
ENSCANG00000028699	EDC3	100	83.661	ENSPSIG00000008474	EDC3	100	83.661	Pelodiscus_sinensis
ENSCANG00000028699	EDC3	100	67.123	ENSPMGG00000007223	edc3	100	67.123	Periophthalmus_magnuspinnatus
ENSCANG00000028699	EDC3	100	96.654	ENSPEMG00000015260	Edc3	100	96.654	Peromyscus_maniculatus_bairdii
ENSCANG00000028699	EDC3	100	90.945	ENSPCIG00000006276	EDC3	70	91.124	Phascolarctos_cinereus
ENSCANG00000028699	EDC3	100	69.155	ENSPFOG00000012204	edc3	100	69.155	Poecilia_formosa
ENSCANG00000028699	EDC3	100	69.155	ENSPLAG00000014420	edc3	100	69.155	Poecilia_latipinna
ENSCANG00000028699	EDC3	100	69.155	ENSPMEG00000023289	edc3	100	69.155	Poecilia_mexicana
ENSCANG00000028699	EDC3	100	69.352	ENSPREG00000016022	edc3	100	69.352	Poecilia_reticulata
ENSCANG00000028699	EDC3	100	97.638	ENSPPYG00000006642	EDC3	100	97.638	Pongo_abelii
ENSCANG00000028699	EDC3	88	100.000	ENSPCAG00000002802	EDC3	88	100.000	Procavia_capensis
ENSCANG00000028699	EDC3	100	97.835	ENSPCOG00000013364	EDC3	100	97.835	Propithecus_coquereli
ENSCANG00000028699	EDC3	100	96.260	ENSPVAG00000014733	EDC3	100	96.260	Pteropus_vampyrus
ENSCANG00000028699	EDC3	100	68.369	ENSPNYG00000021797	edc3	100	67.583	Pundamilia_nyererei
ENSCANG00000028699	EDC3	99	58.285	ENSPNYG00000009669	EDC3	99	58.285	Pundamilia_nyererei
ENSCANG00000028699	EDC3	100	69.557	ENSPNAG00000019657	edc3	100	69.557	Pygocentrus_nattereri
ENSCANG00000028699	EDC3	99	96.238	ENSRNOG00000019579	Edc3	99	96.238	Rattus_norvegicus
ENSCANG00000028699	EDC3	100	99.606	ENSRBIG00000019488	EDC3	100	99.606	Rhinopithecus_bieti
ENSCANG00000028699	EDC3	100	99.606	ENSRROG00000034959	EDC3	100	99.606	Rhinopithecus_roxellana
ENSCANG00000028699	EDC3	100	99.016	ENSSBOG00000004896	EDC3	100	99.016	Saimiri_boliviensis_boliviensis
ENSCANG00000028699	EDC3	96	92.434	ENSSHAG00000015075	EDC3	95	92.434	Sarcophilus_harrisii
ENSCANG00000028699	EDC3	100	70.233	ENSSFOG00015016939	edc3	100	71.206	Scleropages_formosus
ENSCANG00000028699	EDC3	100	64.591	ENSSFOG00015002439	edc3	100	64.786	Scleropages_formosus
ENSCANG00000028699	EDC3	100	69.352	ENSSMAG00000010695	edc3	100	69.352	Scophthalmus_maximus
ENSCANG00000028699	EDC3	99	57.895	ENSSMAG00000010176	-	99	57.895	Scophthalmus_maximus
ENSCANG00000028699	EDC3	100	59.923	ENSSDUG00000007671	EDC3	100	59.923	Seriola_dumerili
ENSCANG00000028699	EDC3	100	69.412	ENSSDUG00000021844	edc3	100	69.412	Seriola_dumerili
ENSCANG00000028699	EDC3	100	69.412	ENSSLDG00000022046	edc3	100	69.412	Seriola_lalandi_dorsalis
ENSCANG00000028699	EDC3	81	96.371	ENSSARG00000003907	EDC3	80	96.371	Sorex_araneus
ENSCANG00000028699	EDC3	100	88.976	ENSSPUG00000008232	EDC3	100	88.976	Sphenodon_punctatus
ENSCANG00000028699	EDC3	100	57.393	ENSSPAG00000020327	EDC3	100	57.670	Stegastes_partitus
ENSCANG00000028699	EDC3	100	70.138	ENSSPAG00000010009	edc3	100	70.138	Stegastes_partitus
ENSCANG00000028699	EDC3	100	97.835	ENSSSCG00000001903	EDC3	100	97.835	Sus_scrofa
ENSCANG00000028699	EDC3	100	88.780	ENSTGUG00000004007	EDC3	100	88.780	Taeniopygia_guttata
ENSCANG00000028699	EDC3	100	69.941	ENSTRUG00000017078	edc3	100	69.941	Takifugu_rubripes
ENSCANG00000028699	EDC3	100	68.689	ENSTNIG00000016047	edc3	100	68.689	Tetraodon_nigroviridis
ENSCANG00000028699	EDC3	100	97.047	ENSTTRG00000007990	EDC3	100	97.047	Tursiops_truncatus
ENSCANG00000028699	EDC3	100	96.457	ENSUAMG00000026710	-	100	96.457	Ursus_americanus
ENSCANG00000028699	EDC3	100	96.457	ENSUMAG00000005006	EDC3	96	96.457	Ursus_maritimus
ENSCANG00000028699	EDC3	79	87.037	ENSVPAG00000003499	-	79	87.037	Vicugna_pacos
ENSCANG00000028699	EDC3	100	97.244	ENSVVUG00000018601	EDC3	100	97.244	Vulpes_vulpes
ENSCANG00000028699	EDC3	68	82.471	ENSXETG00000010622	edc3	99	83.621	Xenopus_tropicalis
ENSCANG00000028699	EDC3	100	68.959	ENSXMAG00000007377	edc3	100	68.959	Xiphophorus_maculatus