EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000028838 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: lupus La protein pseudogene
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Minus strand
Length: 1244 bases
Position: chrKN979430.1:3955728-3956971
Accession: 105512457
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000010866	RRM_3	PF08777.11	2.2e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000033759	-	1110	-	ENSCANP00000010866	369 (aa)	-	A0A2K5I2U3

Gene Model

Click here to download ENSCANG00000028838's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000028838's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000028838	-	95	76.942	ENSCANG00000027695	SSB	98	76.942
ENSCANG00000028838	-	95	69.565	ENSCANG00000033240	-	98	69.565

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000028838	-	95	76.368	ENSG00000138385	SSB	98	76.368	Homo_sapiens
ENSCANG00000028838	-	88	44.947	ENSAPOG00000003448	ssb	97	45.333	Acanthochromis_polyacanthus
ENSCANG00000028838	-	95	71.671	ENSAMEG00000010507	SSB	98	71.671	Ailuropoda_melanoleuca
ENSCANG00000028838	-	88	45.968	ENSACIG00000001738	ssb	97	46.505	Amphilophus_citrinellus
ENSCANG00000028838	-	88	45.213	ENSAOCG00000020398	ssb	97	45.333	Amphiprion_ocellaris
ENSCANG00000028838	-	88	45.479	ENSAPEG00000020395	ssb	97	45.600	Amphiprion_percula
ENSCANG00000028838	-	89	45.767	ENSATEG00000016884	ssb	94	45.767	Anabas_testudineus
ENSCANG00000028838	-	91	55.198	ENSAPLG00000006109	SSB	95	56.265	Anas_platyrhynchos
ENSCANG00000028838	-	92	52.296	ENSACAG00000017008	SSB	95	53.061	Anolis_carolinensis
ENSCANG00000028838	-	95	69.152	ENSANAG00000027195	-	98	71.465	Aotus_nancymaae
ENSCANG00000028838	-	95	43.392	ENSACLG00000010798	ssb	98	43.890	Astatotilapia_calliptera
ENSCANG00000028838	-	75	48.000	ENSAMXG00000012606	ssb	97	45.885	Astyanax_mexicanus
ENSCANG00000028838	-	95	74.185	ENSBTAG00000008716	SSB	98	74.185	Bos_taurus
ENSCANG00000028838	-	95	76.441	ENSCJAG00000045073	SSB	98	76.441	Callithrix_jacchus
ENSCANG00000028838	-	95	74.185	ENSCAFG00000012418	SSB	98	74.185	Canis_familiaris
ENSCANG00000028838	-	95	74.185	ENSCAFG00020002900	SSB	98	74.185	Canis_lupus_dingo
ENSCANG00000028838	-	95	69.095	ENSCHIG00000022196	-	98	69.095	Capra_hircus
ENSCANG00000028838	-	95	73.935	ENSCHIG00000022624	-	98	73.935	Capra_hircus
ENSCANG00000028838	-	95	74.937	ENSTSYG00000000097	SSB	98	74.937	Carlito_syrichta
ENSCANG00000028838	-	95	74.687	ENSCPOG00000003338	SSB	98	74.687	Cavia_porcellus
ENSCANG00000028838	-	95	76.942	ENSCCAG00000035147	SSB	98	76.942	Cebus_capucinus
ENSCANG00000028838	-	93	81.341	ENSCATG00000042909	-	95	81.341	Cercocebus_atys
ENSCANG00000028838	-	95	68.835	ENSCATG00000036701	SSB	98	68.835	Cercocebus_atys
ENSCANG00000028838	-	95	74.436	ENSCLAG00000015617	-	98	74.436	Chinchilla_lanigera
ENSCANG00000028838	-	95	71.357	ENSCSAG00000018390	-	100	71.357	Chlorocebus_sabaeus
ENSCANG00000028838	-	95	76.441	ENSCSAG00000015200	SSB	87	76.441	Chlorocebus_sabaeus
ENSCANG00000028838	-	95	73.935	ENSCHOG00000007763	SSB	98	73.935	Choloepus_hoffmanni
ENSCANG00000028838	-	93	61.069	ENSCPBG00000006519	SSB	96	62.087	Chrysemys_picta_bellii
ENSCANG00000028838	-	92	62.725	ENSCGRG00001024831	Ssb	95	63.753	Cricetulus_griseus_chok1gshd
ENSCANG00000028838	-	92	62.725	ENSCGRG00000005387	Ssb	95	63.753	Cricetulus_griseus_crigri
ENSCANG00000028838	-	91	45.195	ENSCSEG00000011599	ssb	96	45.455	Cynoglossus_semilaevis
ENSCANG00000028838	-	91	45.736	ENSCVAG00000021558	ssb	94	45.889	Cyprinodon_variegatus
ENSCANG00000028838	-	88	45.187	ENSDARG00000029252	ssb	93	46.113	Danio_rerio
ENSCANG00000028838	-	95	73.935	ENSDNOG00000013450	SSB	98	73.935	Dasypus_novemcinctus
ENSCANG00000028838	-	95	65.347	ENSDORG00000005543	Ssb	98	65.347	Dipodomys_ordii
ENSCANG00000028838	-	87	39.674	ENSEBUG00000001237	ssb	95	39.566	Eptatretus_burgeri
ENSCANG00000028838	-	95	75.439	ENSEASG00005022835	SSB	98	75.439	Equus_asinus_asinus
ENSCANG00000028838	-	95	75.439	ENSECAG00000018495	SSB	98	75.439	Equus_caballus
ENSCANG00000028838	-	70	55.738	ENSEEUG00000008077	SSB	78	55.738	Erinaceus_europaeus
ENSCANG00000028838	-	96	46.914	ENSELUG00000020929	ssb	99	47.525	Esox_lucius
ENSCANG00000028838	-	95	74.937	ENSFCAG00000011601	SSB	98	74.937	Felis_catus
ENSCANG00000028838	-	93	59.079	ENSFALG00000000930	SSB	96	59.079	Ficedula_albicollis
ENSCANG00000028838	-	95	73.935	ENSFDAG00000000598	SSB	98	73.935	Fukomys_damarensis
ENSCANG00000028838	-	73	44.286	ENSFHEG00000003268	ssb	95	45.425	Fundulus_heteroclitus
ENSCANG00000028838	-	89	43.636	ENSGMOG00000002664	ssb	96	44.301	Gadus_morhua
ENSCANG00000028838	-	93	59.439	ENSGALG00000009677	SSB	96	59.439	Gallus_gallus
ENSCANG00000028838	-	89	44.211	ENSGAFG00000002749	ssb	94	44.474	Gambusia_affinis
ENSCANG00000028838	-	85	43.280	ENSGACG00000005107	ssb	92	44.086	Gasterosteus_aculeatus
ENSCANG00000028838	-	93	60.814	ENSGAGG00000007807	SSB	96	61.323	Gopherus_agassizii
ENSCANG00000028838	-	95	66.752	ENSGGOG00000024891	-	98	66.752	Gorilla_gorilla
ENSCANG00000028838	-	58	83.636	ENSGGOG00000023471	-	89	83.636	Gorilla_gorilla
ENSCANG00000028838	-	95	43.392	ENSHBUG00000006584	ssb	98	43.890	Haplochromis_burtoni
ENSCANG00000028838	-	95	71.247	ENSHGLG00000004478	-	98	71.247	Heterocephalus_glaber_female
ENSCANG00000028838	-	95	73.399	ENSHGLG00000017580	-	98	73.399	Heterocephalus_glaber_female
ENSCANG00000028838	-	91	69.895	ENSHGLG00000005832	-	97	69.895	Heterocephalus_glaber_female
ENSCANG00000028838	-	95	73.399	ENSHGLG00100003084	-	98	73.399	Heterocephalus_glaber_male
ENSCANG00000028838	-	90	66.038	ENSHGLG00100008767	-	95	66.038	Heterocephalus_glaber_male
ENSCANG00000028838	-	90	43.455	ENSHCOG00000019011	ssb	96	43.717	Hippocampus_comes
ENSCANG00000028838	-	89	46.875	ENSIPUG00000003681	SSB	93	46.875	Ictalurus_punctatus
ENSCANG00000028838	-	95	74.687	ENSSTOG00000008416	SSB	98	74.687	Ictidomys_tridecemlineatus
ENSCANG00000028838	-	95	62.740	ENSJJAG00000023158	-	98	62.740	Jaculus_jaculus
ENSCANG00000028838	-	95	57.487	ENSJJAG00000016250	-	98	57.487	Jaculus_jaculus
ENSCANG00000028838	-	88	44.947	ENSKMAG00000017317	ssb	93	45.213	Kryptolebias_marmoratus
ENSCANG00000028838	-	88	43.351	ENSLBEG00000017345	ssb	93	43.750	Labrus_bergylta
ENSCANG00000028838	-	92	53.077	ENSLACG00000014056	SSB	95	55.499	Latimeria_chalumnae
ENSCANG00000028838	-	91	53.525	ENSLOCG00000007933	ssb	94	54.047	Lepisosteus_oculatus
ENSCANG00000028838	-	91	71.285	ENSLAFG00000000867	-	98	70.120	Loxodonta_africana
ENSCANG00000028838	-	69	53.821	ENSLAFG00000026721	-	99	53.821	Loxodonta_africana
ENSCANG00000028838	-	95	62.312	ENSLAFG00000028909	-	98	62.312	Loxodonta_africana
ENSCANG00000028838	-	95	76.692	ENSMFAG00000039066	SSB	98	76.692	Macaca_fascicularis
ENSCANG00000028838	-	84	68.857	ENSMFAG00000041478	-	100	68.857	Macaca_fascicularis
ENSCANG00000028838	-	92	74.352	ENSMMUG00000039889	-	95	74.352	Macaca_mulatta
ENSCANG00000028838	-	95	67.176	ENSMMUG00000011724	-	95	67.176	Macaca_mulatta
ENSCANG00000028838	-	95	76.692	ENSMMUG00000023051	SSB	98	76.692	Macaca_mulatta
ENSCANG00000028838	-	95	64.604	ENSMNEG00000028321	SSB	98	64.851	Macaca_nemestrina
ENSCANG00000028838	-	84	68.857	ENSMNEG00000034698	-	100	68.857	Macaca_nemestrina
ENSCANG00000028838	-	95	76.692	ENSMLEG00000035717	SSB	98	76.692	Mandrillus_leucophaeus
ENSCANG00000028838	-	95	57.333	ENSMLEG00000042644	-	98	57.333	Mandrillus_leucophaeus
ENSCANG00000028838	-	91	46.494	ENSMAMG00000004800	ssb	95	46.494	Mastacembelus_armatus
ENSCANG00000028838	-	95	43.392	ENSMZEG00005005749	ssb	98	43.890	Maylandia_zebra
ENSCANG00000028838	-	93	59.184	ENSMGAG00000010328	SSB	96	59.694	Meleagris_gallopavo
ENSCANG00000028838	-	97	68.719	ENSMICG00000033304	-	98	69.309	Microcebus_murinus
ENSCANG00000028838	-	95	75.188	ENSMICG00000028252	-	98	75.188	Microcebus_murinus
ENSCANG00000028838	-	92	52.011	ENSMODG00000007027	-	95	52.011	Monodelphis_domestica
ENSCANG00000028838	-	91	60.051	ENSMODG00000008227	-	96	61.654	Monodelphis_domestica
ENSCANG00000028838	-	91	55.285	ENSMODG00000019271	-	94	55.526	Monodelphis_domestica
ENSCANG00000028838	-	84	43.370	ENSMALG00000008045	ssb	89	46.667	Monopterus_albus
ENSCANG00000028838	-	92	61.750	MGP_CAROLIEiJ_G0023629	-	100	60.870	Mus_caroli
ENSCANG00000028838	-	92	61.000	ENSMUSG00000068882	Ssb	100	60.870	Mus_musculus
ENSCANG00000028838	-	92	60.750	MGP_PahariEiJ_G0025081	-	100	60.870	Mus_pahari
ENSCANG00000028838	-	92	61.000	MGP_SPRETEiJ_G0024551	Ssb	100	60.870	Mus_spretus
ENSCANG00000028838	-	95	74.687	ENSMPUG00000000785	SSB	98	74.687	Mustela_putorius_furo
ENSCANG00000028838	-	95	69.565	ENSMLUG00000016316	SSB	98	69.565	Myotis_lucifugus
ENSCANG00000028838	-	90	44.503	ENSNBRG00000012661	ssb	97	43.548	Neolamprologus_brichardi
ENSCANG00000028838	-	95	76.942	ENSNLEG00000004958	SSB	98	76.942	Nomascus_leucogenys
ENSCANG00000028838	-	90	60.916	ENSNLEG00000028754	-	95	59.737	Nomascus_leucogenys
ENSCANG00000028838	-	55	64.659	ENSMEUG00000001650	-	100	64.659	Notamacropus_eugenii
ENSCANG00000028838	-	54	80.128	ENSOPRG00000008475	-	98	59.859	Ochotona_princeps
ENSCANG00000028838	-	87	72.965	ENSODEG00000004202	-	90	72.965	Octodon_degus
ENSCANG00000028838	-	95	42.643	ENSONIG00000008776	ssb	98	43.142	Oreochromis_niloticus
ENSCANG00000028838	-	93	65.810	ENSOANG00000008543	SSB	96	66.581	Ornithorhynchus_anatinus
ENSCANG00000028838	-	95	73.935	ENSOCUG00000010396	SSB	98	73.935	Oryctolagus_cuniculus
ENSCANG00000028838	-	91	46.234	ENSORLG00000017208	ssb	96	46.494	Oryzias_latipes
ENSCANG00000028838	-	91	45.974	ENSORLG00020022574	ssb	96	46.234	Oryzias_latipes_hni
ENSCANG00000028838	-	91	45.974	ENSORLG00015016592	ssb	96	46.234	Oryzias_latipes_hsok
ENSCANG00000028838	-	91	44.819	ENSOMEG00000003193	ssb	95	46.053	Oryzias_melastigma
ENSCANG00000028838	-	95	70.361	ENSOGAG00000029768	SSB	98	70.361	Otolemur_garnettii
ENSCANG00000028838	-	93	74.550	ENSOARG00000002906	SSB	96	74.807	Ovis_aries
ENSCANG00000028838	-	95	76.368	ENSPPAG00000042673	SSB	98	76.368	Pan_paniscus
ENSCANG00000028838	-	92	65.952	ENSPPAG00000006189	-	95	66.310	Pan_paniscus
ENSCANG00000028838	-	95	65.729	ENSPPAG00000032427	-	98	65.729	Pan_paniscus
ENSCANG00000028838	-	95	74.937	ENSPPRG00000006599	SSB	98	74.937	Panthera_pardus
ENSCANG00000028838	-	95	74.687	ENSPTIG00000011021	SSB	95	74.687	Panthera_tigris_altaica
ENSCANG00000028838	-	95	62.051	ENSPTRG00000042880	-	98	62.051	Pan_troglodytes
ENSCANG00000028838	-	95	76.368	ENSPTRG00000012620	SSB	98	76.368	Pan_troglodytes
ENSCANG00000028838	-	100	59.694	ENSPANG00000031877	-	100	59.694	Papio_anubis
ENSCANG00000028838	-	93	76.676	ENSPANG00000034126	-	95	76.968	Papio_anubis
ENSCANG00000028838	-	95	76.692	ENSPANG00000007440	SSB	98	76.692	Papio_anubis
ENSCANG00000028838	-	91	47.792	ENSPKIG00000019325	ssb	98	48.118	Paramormyrops_kingsleyae
ENSCANG00000028838	-	93	54.592	ENSPSIG00000002265	SSB	89	59.542	Pelodiscus_sinensis
ENSCANG00000028838	-	80	45.988	ENSPMGG00000020075	ssb	86	48.148	Periophthalmus_magnuspinnatus
ENSCANG00000028838	-	76	39.877	ENSPMAG00000002982	ssb	88	38.947	Petromyzon_marinus
ENSCANG00000028838	-	95	62.000	ENSPCIG00000028591	-	99	63.750	Phascolarctos_cinereus
ENSCANG00000028838	-	88	45.455	ENSPFOG00000009650	ssb	93	45.722	Poecilia_formosa
ENSCANG00000028838	-	84	45.556	ENSPLAG00000020498	ssb	93	45.455	Poecilia_latipinna
ENSCANG00000028838	-	88	45.455	ENSPMEG00000001051	ssb	93	45.455	Poecilia_mexicana
ENSCANG00000028838	-	88	44.681	ENSPREG00000003708	ssb	98	44.947	Poecilia_reticulata
ENSCANG00000028838	-	95	76.942	ENSPPYG00000012919	SSB	98	76.942	Pongo_abelii
ENSCANG00000028838	-	89	68.435	ENSPCAG00000010276	SSB	98	68.435	Procavia_capensis
ENSCANG00000028838	-	95	70.101	ENSPCOG00000015741	-	98	72.682	Propithecus_coquereli
ENSCANG00000028838	-	95	69.351	ENSPCOG00000023189	-	98	69.351	Propithecus_coquereli
ENSCANG00000028838	-	83	74.859	ENSPVAG00000006615	SSB	99	74.859	Pteropus_vampyrus
ENSCANG00000028838	-	95	43.392	ENSPNYG00000006444	ssb	98	43.890	Pundamilia_nyererei
ENSCANG00000028838	-	94	45.750	ENSPNAG00000011708	ssb	97	46.500	Pygocentrus_nattereri
ENSCANG00000028838	-	92	60.750	ENSRNOG00000007998	Ssb	95	60.750	Rattus_norvegicus
ENSCANG00000028838	-	92	62.274	ENSRNOG00000011606	AABR07061825.1	95	62.274	Rattus_norvegicus
ENSCANG00000028838	-	93	84.257	ENSRBIG00000029918	-	95	84.257	Rhinopithecus_bieti
ENSCANG00000028838	-	87	71.429	ENSRBIG00000041232	-	88	71.429	Rhinopithecus_bieti
ENSCANG00000028838	-	95	63.224	ENSRBIG00000041972	SSB	98	63.476	Rhinopithecus_bieti
ENSCANG00000028838	-	86	75.802	ENSRBIG00000041608	-	93	75.802	Rhinopithecus_bieti
ENSCANG00000028838	-	93	68.848	ENSRROG00000031684	-	98	68.848	Rhinopithecus_roxellana
ENSCANG00000028838	-	95	76.942	ENSRROG00000040346	SSB	98	76.942	Rhinopithecus_roxellana
ENSCANG00000028838	-	86	80.175	ENSRROG00000034102	-	96	73.008	Rhinopithecus_roxellana
ENSCANG00000028838	-	93	95.627	ENSRROG00000007149	-	95	95.627	Rhinopithecus_roxellana
ENSCANG00000028838	-	95	77.444	ENSSBOG00000027204	SSB	98	77.444	Saimiri_boliviensis_boliviensis
ENSCANG00000028838	-	90	65.963	ENSSHAG00000018062	SSB	96	65.641	Sarcophilus_harrisii
ENSCANG00000028838	-	90	47.895	ENSSFOG00015000550	ssb	93	51.842	Scleropages_formosus
ENSCANG00000028838	-	91	42.820	ENSSMAG00000013885	ssb	98	45.504	Scophthalmus_maximus
ENSCANG00000028838	-	89	44.974	ENSSDUG00000020117	ssb	94	45.238	Seriola_dumerili
ENSCANG00000028838	-	88	43.817	ENSSLDG00000002525	ssb	93	43.817	Seriola_lalandi_dorsalis
ENSCANG00000028838	-	89	70.667	ENSSARG00000007747	SSB	98	70.667	Sorex_araneus
ENSCANG00000028838	-	93	59.796	ENSSPUG00000012112	SSB	96	59.796	Sphenodon_punctatus
ENSCANG00000028838	-	88	45.213	ENSSPAG00000005696	ssb	97	45.576	Stegastes_partitus
ENSCANG00000028838	-	95	58.438	ENSSSCG00000015938	SSB	98	59.045	Sus_scrofa
ENSCANG00000028838	-	91	59.326	ENSTGUG00000007942	SSB	98	58.750	Taeniopygia_guttata
ENSCANG00000028838	-	85	45.355	ENSTRUG00000017839	ssb	91	46.049	Takifugu_rubripes
ENSCANG00000028838	-	85	46.175	ENSTNIG00000000915	ssb	99	46.175	Tetraodon_nigroviridis
ENSCANG00000028838	-	80	71.495	ENSTBEG00000009056	SSB	80	71.495	Tupaia_belangeri
ENSCANG00000028838	-	95	74.436	ENSTTRG00000002152	SSB	98	74.436	Tursiops_truncatus
ENSCANG00000028838	-	90	75.926	ENSUAMG00000027833	SSB	99	75.926	Ursus_americanus
ENSCANG00000028838	-	95	74.687	ENSUMAG00000013907	SSB	98	74.687	Ursus_maritimus
ENSCANG00000028838	-	92	75.258	ENSVPAG00000007183	SSB	97	75.258	Vicugna_pacos
ENSCANG00000028838	-	95	74.185	ENSVVUG00000016573	SSB	76	74.185	Vulpes_vulpes
ENSCANG00000028838	-	91	48.556	ENSXETG00000025402	ssb	89	50.000	Xenopus_tropicalis
ENSCANG00000028838	-	88	42.513	ENSXCOG00000019109	ssb	98	42.781	Xiphophorus_couchianus
ENSCANG00000028838	-	89	43.947	ENSXMAG00000004888	ssb	94	44.211	Xiphophorus_maculatus