EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCANG00000028849 (Gene tree)
Gene ID: 105521730
Gene Symbol: -
Alias: -
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 231409 bases
Position: chrKN982752.1:78140-309548
Accession: 105521730
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000011009	R3H	PF01424.22	5.1e-05	1	1
ENSCANP00000011000	R3H	PF01424.22	5.7e-05	1	1
ENSCANP00000011013	RNA_bind	PF08675.11	2.1e-12	1	1
ENSCANP00000011009	RNA_bind	PF08675.11	2.8e-12	1	1
ENSCANP00000011000	RNA_bind	PF08675.11	3e-12	1	1
ENSCANP00000011000	CAF1	PF04857.20	2e-73	1	1
ENSCANP00000011009	CAF1	PF04857.20	2.3e-54	1	2
ENSCANP00000011009	CAF1	PF04857.20	2.3e-54	2	2
ENSCANP00000011013	CAF1	PF04857.20	1.4e-51	1	2
ENSCANP00000011013	CAF1	PF04857.20	1.4e-51	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000033902	-	1725	-	ENSCANP00000011009	574 (aa)	-	A0A2K5I2Z0
ENSCANT00000033893	-	1863	XM_011956026	ENSCANP00000011000	620 (aa)	XP_011811416	A0A2K5I2Y1
ENSCANT00000033906	-	1353	-	ENSCANP00000011013	450 (aa)	-	A0A2K5I320

Gene Model

Click here to download ENSCANG00000028849's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000028849's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000028849	-	100	100.000	ENSG00000140694	PARN	100	100.000	Homo_sapiens
ENSCANG00000028849	-	100	96.610	ENSAMEG00000011208	PARN	100	80.273	Ailuropoda_melanoleuca
ENSCANG00000028849	-	75	79.245	ENSACIG00000000619	parn	76	77.049	Amphilophus_citrinellus
ENSCANG00000028849	-	93	77.966	ENSAOCG00000003465	parn	83	62.149	Amphiprion_ocellaris
ENSCANG00000028849	-	73	64.490	ENSAPEG00000010661	parn	91	64.490	Amphiprion_percula
ENSCANG00000028849	-	86	76.271	ENSATEG00000004661	parn	88	61.356	Anabas_testudineus
ENSCANG00000028849	-	99	87.037	ENSAPLG00000013914	PARN	99	73.953	Anas_platyrhynchos
ENSCANG00000028849	-	100	89.831	ENSACAG00000004973	PARN	100	68.892	Anolis_carolinensis
ENSCANG00000028849	-	100	100.000	ENSANAG00000031516	PARN	100	100.000	Aotus_nancymaae
ENSCANG00000028849	-	89	77.966	ENSACLG00000004742	parn	85	63.218	Astatotilapia_calliptera
ENSCANG00000028849	-	86	79.661	ENSAMXG00000012390	parn	92	61.460	Astyanax_mexicanus
ENSCANG00000028849	-	100	98.305	ENSBTAG00000018097	PARN	100	80.711	Bos_taurus
ENSCANG00000028849	-	100	100.000	ENSCJAG00000015866	PARN	100	100.000	Callithrix_jacchus
ENSCANG00000028849	-	100	94.915	ENSCAFG00000018795	PARN	100	80.547	Canis_familiaris
ENSCANG00000028849	-	100	96.610	ENSCAFG00020024126	PARN	100	80.851	Canis_lupus_dingo
ENSCANG00000028849	-	100	98.305	ENSCHIG00000018143	PARN	100	82.362	Capra_hircus
ENSCANG00000028849	-	56	77.500	ENSCAPG00000007984	PARN	71	61.009	Cavia_aperea
ENSCANG00000028849	-	100	98.305	ENSCPOG00000002263	PARN	100	78.875	Cavia_porcellus
ENSCANG00000028849	-	100	100.000	ENSCCAG00000030367	PARN	100	100.000	Cebus_capucinus
ENSCANG00000028849	-	50	31.507	ENSCATG00000033196	PNLDC1	65	31.293	Cercocebus_atys
ENSCANG00000028849	-	90	98.780	ENSCATG00000041368	PARN	100	100.000	Cercocebus_atys
ENSCANG00000028849	-	100	96.610	ENSCLAG00000015406	PARN	99	78.571	Chinchilla_lanigera
ENSCANG00000028849	-	100	100.000	ENSCSAG00000008142	PARN	100	86.930	Chlorocebus_sabaeus
ENSCANG00000028849	-	98	98.077	ENSCHOG00000007014	PARN	100	72.536	Choloepus_hoffmanni
ENSCANG00000028849	-	89	72.274	ENSCPBG00000006609	PARN	97	73.427	Chrysemys_picta_bellii
ENSCANG00000028849	-	72	47.368	ENSCING00000010142	-	99	37.848	Ciona_intestinalis
ENSCANG00000028849	-	100	96.610	ENSCGRG00001012096	Parn	100	75.228	Cricetulus_griseus_chok1gshd
ENSCANG00000028849	-	100	96.610	ENSCGRG00000004939	Parn	100	75.228	Cricetulus_griseus_crigri
ENSCANG00000028849	-	92	81.132	ENSCSEG00000002064	parn	100	57.778	Cynoglossus_semilaevis
ENSCANG00000028849	-	87	77.966	ENSCVAG00000014848	parn	83	62.814	Cyprinodon_variegatus
ENSCANG00000028849	-	100	71.186	ENSDARG00000102634	parn	100	59.259	Danio_rerio
ENSCANG00000028849	-	100	98.305	ENSDNOG00000000833	PARN	100	80.851	Dasypus_novemcinctus
ENSCANG00000028849	-	73	87.266	ENSETEG00000014828	-	78	88.593	Echinops_telfairi
ENSCANG00000028849	-	100	98.305	ENSEASG00005011400	PARN	100	81.651	Equus_asinus_asinus
ENSCANG00000028849	-	100	96.610	ENSECAG00000017792	PARN	100	81.498	Equus_caballus
ENSCANG00000028849	-	75	92.453	ENSEEUG00000010370	PARN	77	92.453	Erinaceus_europaeus
ENSCANG00000028849	-	88	79.661	ENSELUG00000013139	parn	77	61.653	Esox_lucius
ENSCANG00000028849	-	100	96.610	ENSFCAG00000044961	PARN	100	96.610	Felis_catus
ENSCANG00000028849	-	98	88.462	ENSFALG00000003911	PARN	98	72.784	Ficedula_albicollis
ENSCANG00000028849	-	100	98.305	ENSFDAG00000009234	PARN	100	79.358	Fukomys_damarensis
ENSCANG00000028849	-	87	79.245	ENSFHEG00000013738	parn	92	77.966	Fundulus_heteroclitus
ENSCANG00000028849	-	76	77.966	ENSGMOG00000003231	parn	97	64.663	Gadus_morhua
ENSCANG00000028849	-	100	91.525	ENSGALG00000003091	PARN	100	71.865	Gallus_gallus
ENSCANG00000028849	-	76	79.661	ENSGAFG00000011061	parn	84	62.438	Gambusia_affinis
ENSCANG00000028849	-	76	74.576	ENSGACG00000019501	parn	100	58.939	Gasterosteus_aculeatus
ENSCANG00000028849	-	69	64.095	ENSGAGG00000023281	PARN	83	64.095	Gopherus_agassizii
ENSCANG00000028849	-	96	100.000	ENSGGOG00000025224	PARN	100	100.000	Gorilla_gorilla
ENSCANG00000028849	-	89	77.966	ENSHBUG00000017906	parn	94	63.495	Haplochromis_burtoni
ENSCANG00000028849	-	100	98.305	ENSHGLG00000010886	PARN	100	79.331	Heterocephalus_glaber_female
ENSCANG00000028849	-	100	98.305	ENSHGLG00100014659	PARN	100	79.331	Heterocephalus_glaber_male
ENSCANG00000028849	-	68	84.615	ENSHCOG00000008683	parn	91	62.362	Hippocampus_comes
ENSCANG00000028849	-	86	69.492	ENSIPUG00000012401	parn	84	55.043	Ictalurus_punctatus
ENSCANG00000028849	-	100	96.610	ENSSTOG00000007519	PARN	100	79.483	Ictidomys_tridecemlineatus
ENSCANG00000028849	-	100	98.305	ENSJJAG00000023049	Parn	100	77.744	Jaculus_jaculus
ENSCANG00000028849	-	93	76.271	ENSKMAG00000009462	parn	84	62.938	Kryptolebias_marmoratus
ENSCANG00000028849	-	87	77.966	ENSLBEG00000009167	parn	90	61.960	Labrus_bergylta
ENSCANG00000028849	-	78	65.201	ENSLACG00000004207	PARN	94	71.707	Latimeria_chalumnae
ENSCANG00000028849	-	96	81.356	ENSLOCG00000000715	parn	87	63.489	Lepisosteus_oculatus
ENSCANG00000028849	-	100	98.305	ENSLAFG00000015036	PARN	100	81.003	Loxodonta_africana
ENSCANG00000028849	-	100	100.000	ENSMFAG00000044852	PARN	100	100.000	Macaca_fascicularis
ENSCANG00000028849	-	100	100.000	ENSMMUG00000018849	PARN	100	100.000	Macaca_mulatta
ENSCANG00000028849	-	100	100.000	ENSMNEG00000045108	PARN	100	100.000	Macaca_nemestrina
ENSCANG00000028849	-	100	100.000	ENSMLEG00000031743	PARN	100	100.000	Mandrillus_leucophaeus
ENSCANG00000028849	-	89	77.966	ENSMAMG00000006939	parn	84	62.131	Mastacembelus_armatus
ENSCANG00000028849	-	89	77.966	ENSMZEG00005013590	parn	90	65.392	Maylandia_zebra
ENSCANG00000028849	-	93	100.000	ENSMGAG00000001004	PARN	68	100.000	Meleagris_gallopavo
ENSCANG00000028849	-	95	94.286	ENSMAUG00000008025	Parn	100	70.270	Mesocricetus_auratus
ENSCANG00000028849	-	100	98.305	ENSMICG00000016053	PARN	100	98.305	Microcebus_murinus
ENSCANG00000028849	-	68	94.915	ENSMOCG00000022211	Parn	100	78.039	Microtus_ochrogaster
ENSCANG00000028849	-	76	79.661	ENSMMOG00000011333	parn	87	64.781	Mola_mola
ENSCANG00000028849	-	68	91.525	ENSMODG00000004915	PARN	99	79.648	Monodelphis_domestica
ENSCANG00000028849	-	80	86.207	ENSMALG00000019426	parn	91	67.091	Monopterus_albus
ENSCANG00000028849	-	100	94.915	MGP_CAROLIEiJ_G0020466	Parn	100	75.878	Mus_caroli
ENSCANG00000028849	-	100	93.220	ENSMUSG00000022685	Parn	100	92.683	Mus_musculus
ENSCANG00000028849	-	100	96.610	MGP_PahariEiJ_G0016172	Parn	100	75.725	Mus_pahari
ENSCANG00000028849	-	100	94.915	MGP_SPRETEiJ_G0021361	Parn	100	75.878	Mus_spretus
ENSCANG00000028849	-	100	98.305	ENSMPUG00000014464	PARN	100	80.851	Mustela_putorius_furo
ENSCANG00000028849	-	68	94.915	ENSMLUG00000005414	PARN	100	79.684	Myotis_lucifugus
ENSCANG00000028849	-	76	77.966	ENSNBRG00000006805	parn	90	65.082	Neolamprologus_brichardi
ENSCANG00000028849	-	100	100.000	ENSNLEG00000010241	PARN	100	100.000	Nomascus_leucogenys
ENSCANG00000028849	-	92	92.308	ENSMEUG00000008178	-	84	91.892	Notamacropus_eugenii
ENSCANG00000028849	-	98	98.077	ENSOPRG00000012187	PARN	100	74.154	Ochotona_princeps
ENSCANG00000028849	-	100	98.305	ENSODEG00000001617	PARN	100	74.383	Octodon_degus
ENSCANG00000028849	-	100	77.966	ENSONIG00000000151	parn	100	60.030	Oreochromis_niloticus
ENSCANG00000028849	-	81	66.667	ENSOANG00000020155	-	97	67.172	Ornithorhynchus_anatinus
ENSCANG00000028849	-	99	91.071	ENSOCUG00000000322	PARN	100	79.389	Oryctolagus_cuniculus
ENSCANG00000028849	-	92	79.661	ENSORLG00020010313	parn	88	60.287	Oryzias_latipes_hni
ENSCANG00000028849	-	92	79.661	ENSORLG00015000300	parn	88	60.674	Oryzias_latipes_hsok
ENSCANG00000028849	-	88	79.661	ENSOMEG00000019555	parn	97	60.444	Oryzias_melastigma
ENSCANG00000028849	-	68	100.000	ENSOGAG00000014626	PARN	100	79.961	Otolemur_garnettii
ENSCANG00000028849	-	68	98.305	ENSOARG00000007574	PARN	100	83.037	Ovis_aries
ENSCANG00000028849	-	100	100.000	ENSPPAG00000031438	PARN	100	100.000	Pan_paniscus
ENSCANG00000028849	-	100	96.610	ENSPPRG00000018583	PARN	100	96.610	Panthera_pardus
ENSCANG00000028849	-	100	96.610	ENSPTIG00000012135	PARN	100	96.610	Panthera_tigris_altaica
ENSCANG00000028849	-	100	100.000	ENSPTRG00000007792	PARN	100	100.000	Pan_troglodytes
ENSCANG00000028849	-	100	100.000	ENSPANG00000020099	PARN	100	100.000	Papio_anubis
ENSCANG00000028849	-	96	79.661	ENSPKIG00000022807	parn	95	57.393	Paramormyrops_kingsleyae
ENSCANG00000028849	-	98	89.831	ENSPSIG00000014804	PARN	100	71.380	Pelodiscus_sinensis
ENSCANG00000028849	-	72	76.271	ENSPMGG00000014431	parn	75	63.177	Periophthalmus_magnuspinnatus
ENSCANG00000028849	-	100	94.915	ENSPEMG00000018439	Parn	100	73.435	Peromyscus_maniculatus_bairdii
ENSCANG00000028849	-	80	56.874	ENSPMAG00000003956	parn	99	56.874	Petromyzon_marinus
ENSCANG00000028849	-	65	80.542	ENSPCIG00000001259	PARN	91	91.525	Phascolarctos_cinereus
ENSCANG00000028849	-	76	79.661	ENSPFOG00000012823	parn	84	62.109	Poecilia_formosa
ENSCANG00000028849	-	76	79.661	ENSPLAG00000006395	parn	84	62.273	Poecilia_latipinna
ENSCANG00000028849	-	76	79.661	ENSPMEG00000007711	parn	84	62.438	Poecilia_mexicana
ENSCANG00000028849	-	76	79.661	ENSPREG00000000147	parn	84	62.109	Poecilia_reticulata
ENSCANG00000028849	-	100	98.305	ENSPPYG00000007123	PARN	100	85.909	Pongo_abelii
ENSCANG00000028849	-	93	96.154	ENSPCAG00000001741	PARN	100	71.244	Procavia_capensis
ENSCANG00000028849	-	100	98.305	ENSPCOG00000019292	PARN	100	98.305	Propithecus_coquereli
ENSCANG00000028849	-	98	98.077	ENSPVAG00000002547	PARN	100	77.238	Pteropus_vampyrus
ENSCANG00000028849	-	89	77.966	ENSPNYG00000006835	parn	90	62.727	Pundamilia_nyererei
ENSCANG00000028849	-	84	61.273	ENSPNAG00000018905	parn	86	61.273	Pygocentrus_nattereri
ENSCANG00000028849	-	100	93.220	ENSRNOG00000002912	Parn	100	73.254	Rattus_norvegicus
ENSCANG00000028849	-	71	81.609	ENSRBIG00000018726	PARN	100	81.609	Rhinopithecus_bieti
ENSCANG00000028849	-	71	81.609	ENSRROG00000011162	-	100	81.609	Rhinopithecus_roxellana
ENSCANG00000028849	-	100	100.000	ENSSBOG00000034726	PARN	100	100.000	Saimiri_boliviensis_boliviensis
ENSCANG00000028849	-	64	88.000	ENSSHAG00000008493	PARN	88	88.000	Sarcophilus_harrisii
ENSCANG00000028849	-	94	79.661	ENSSFOG00015014165	parn	94	62.437	Scleropages_formosus
ENSCANG00000028849	-	94	69.697	ENSSMAG00000000685	parn	87	60.901	Scophthalmus_maximus
ENSCANG00000028849	-	93	76.271	ENSSDUG00000014555	parn	83	62.771	Seriola_dumerili
ENSCANG00000028849	-	92	66.192	ENSSARG00000014339	PARN	100	67.780	Sorex_araneus
ENSCANG00000028849	-	100	89.831	ENSSPUG00000007719	PARN	100	74.462	Sphenodon_punctatus
ENSCANG00000028849	-	87	77.966	ENSSPAG00000007095	parn	86	65.385	Stegastes_partitus
ENSCANG00000028849	-	100	98.305	ENSSSCG00000007878	PARN	89	80.395	Sus_scrofa
ENSCANG00000028849	-	99	87.037	ENSTGUG00000004971	PARN	99	72.111	Taeniopygia_guttata
ENSCANG00000028849	-	100	79.661	ENSTNIG00000008252	parn	100	59.394	Tetraodon_nigroviridis
ENSCANG00000028849	-	90	72.041	ENSTBEG00000010407	PARN	100	72.041	Tupaia_belangeri
ENSCANG00000028849	-	98	98.077	ENSTTRG00000002843	PARN	100	76.651	Tursiops_truncatus
ENSCANG00000028849	-	67	67.473	ENSUAMG00000008283	PARN	90	67.473	Ursus_americanus
ENSCANG00000028849	-	100	98.305	ENSUMAG00000004527	PARN	100	80.851	Ursus_maritimus
ENSCANG00000028849	-	94	98.077	ENSVPAG00000008968	PARN	100	77.251	Vicugna_pacos
ENSCANG00000028849	-	100	96.610	ENSVVUG00000019509	PARN	100	81.003	Vulpes_vulpes
ENSCANG00000028849	-	100	81.967	ENSXETG00000010994	parn	100	70.950	Xenopus_tropicalis
ENSCANG00000028849	-	86	79.661	ENSXCOG00000015990	parn	96	61.603	Xiphophorus_couchianus
ENSCANG00000028849	-	88	79.661	ENSXMAG00000014783	parn	84	62.645	Xiphophorus_maculatus