EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCANG00000028962 (Gene tree)
Gene ID: 105512573
Gene Symbol: RIF1
Alias: FLJ10599|FLJ12870
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Minus strand
Length: 73247 bases
Position: chrKN980663.1:1568222-1641468
Accession: 105512573
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000011169	Rif1_N	PF12231.8	6.3e-78	1	1
ENSCANP00000011160	Rif1_N	PF12231.8	2.1e-63	1	1
ENSCANP00000011156	Rif1_N	PF12231.8	2.2e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000034056	RIF1-202	7302	XM_011943055	ENSCANP00000011160	2433 (aa)	XP_011798445	A0A2K5I3E4
ENSCANT00000034065	RIF1-203	7250	XM_011943054	ENSCANP00000011169	2363 (aa)	XP_011798444	A0A2K5I3F1
ENSCANT00000034052	RIF1-201	7380	-	ENSCANP00000011156	2459 (aa)	-	A0A2K5I3N7

Gene Model

Click here to download ENSCANG00000028962's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000028962's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000028962	RIF1	100	94.884	ENSG00000080345	RIF1	97	98.173	Homo_sapiens
ENSCANG00000028962	RIF1	61	44.581	ENSAPOG00000011073	rif1	53	45.731	Acanthochromis_polyacanthus
ENSCANG00000028962	RIF1	100	79.739	ENSAMEG00000008461	RIF1	100	79.162	Ailuropoda_melanoleuca
ENSCANG00000028962	RIF1	56	55.652	ENSACIG00000017765	rif1	64	52.551	Amphilophus_citrinellus
ENSCANG00000028962	RIF1	62	54.867	ENSAOCG00000017231	rif1	59	54.867	Amphiprion_ocellaris
ENSCANG00000028962	RIF1	70	54.479	ENSAPEG00000013228	rif1	65	52.785	Amphiprion_percula
ENSCANG00000028962	RIF1	64	51.327	ENSATEG00000022887	rif1	65	51.327	Anabas_testudineus
ENSCANG00000028962	RIF1	84	71.245	ENSAPLG00000007092	RIF1	87	70.815	Anas_platyrhynchos
ENSCANG00000028962	RIF1	84	62.109	ENSACAG00000003714	RIF1	86	62.109	Anolis_carolinensis
ENSCANG00000028962	RIF1	100	89.772	ENSANAG00000024840	RIF1	100	88.440	Aotus_nancymaae
ENSCANG00000028962	RIF1	61	47.938	ENSAMXG00000010910	rif1	52	51.975	Astyanax_mexicanus
ENSCANG00000028962	RIF1	95	78.330	ENSBTAG00000021020	RIF1	100	78.330	Bos_taurus
ENSCANG00000028962	RIF1	100	89.311	ENSCJAG00000003138	RIF1	100	88.000	Callithrix_jacchus
ENSCANG00000028962	RIF1	100	78.352	ENSCAFG00000005670	RIF1	97	77.563	Canis_familiaris
ENSCANG00000028962	RIF1	100	77.642	ENSCAFG00020016401	RIF1	100	76.883	Canis_lupus_dingo
ENSCANG00000028962	RIF1	100	78.653	ENSCHIG00000020327	RIF1	100	78.131	Capra_hircus
ENSCANG00000028962	RIF1	100	78.896	ENSTSYG00000008861	RIF1	100	79.538	Carlito_syrichta
ENSCANG00000028962	RIF1	78	86.047	ENSCAPG00000008957	RIF1	91	86.047	Cavia_aperea
ENSCANG00000028962	RIF1	100	70.240	ENSCPOG00000037898	RIF1	99	69.698	Cavia_porcellus
ENSCANG00000028962	RIF1	100	88.588	ENSCCAG00000024760	RIF1	100	87.348	Cebus_capucinus
ENSCANG00000028962	RIF1	100	97.124	ENSCATG00000033353	RIF1	100	95.833	Cercocebus_atys
ENSCANG00000028962	RIF1	96	73.313	ENSCLAG00000001517	RIF1	99	72.613	Chinchilla_lanigera
ENSCANG00000028962	RIF1	100	96.997	ENSCSAG00000016089	RIF1	100	95.712	Chlorocebus_sabaeus
ENSCANG00000028962	RIF1	96	78.261	ENSCHOG00000007187	RIF1	97	74.309	Choloepus_hoffmanni
ENSCANG00000028962	RIF1	88	78.509	ENSCPBG00000025885	RIF1	90	80.263	Chrysemys_picta_bellii
ENSCANG00000028962	RIF1	100	69.660	ENSCGRG00001024589	Rif1	100	69.024	Cricetulus_griseus_chok1gshd
ENSCANG00000028962	RIF1	99	70.716	ENSCGRG00000010713	Rif1	100	70.212	Cricetulus_griseus_crigri
ENSCANG00000028962	RIF1	65	48.724	ENSCVAG00000022479	rif1	70	47.564	Cyprinodon_variegatus
ENSCANG00000028962	RIF1	100	76.168	ENSDNOG00000011194	RIF1	97	75.789	Dasypus_novemcinctus
ENSCANG00000028962	RIF1	94	72.899	ENSETEG00000012421	RIF1	92	71.234	Echinops_telfairi
ENSCANG00000028962	RIF1	95	92.079	ENSEASG00005023434	RIF1	98	92.079	Equus_asinus_asinus
ENSCANG00000028962	RIF1	96	90.950	ENSECAG00000012679	RIF1	100	87.481	Equus_caballus
ENSCANG00000028962	RIF1	63	54.615	ENSELUG00000006826	rif1	52	54.615	Esox_lucius
ENSCANG00000028962	RIF1	100	79.058	ENSFCAG00000029742	RIF1	100	78.560	Felis_catus
ENSCANG00000028962	RIF1	77	71.171	ENSFALG00000013874	RIF1	86	72.072	Ficedula_albicollis
ENSCANG00000028962	RIF1	100	74.747	ENSFDAG00000006538	RIF1	99	74.062	Fukomys_damarensis
ENSCANG00000028962	RIF1	62	49.355	ENSFHEG00000013721	rif1	65	49.241	Fundulus_heteroclitus
ENSCANG00000028962	RIF1	56	51.261	ENSGMOG00000003517	rif1	80	52.747	Gadus_morhua
ENSCANG00000028962	RIF1	78	71.552	ENSGALG00000012484	RIF1	86	71.552	Gallus_gallus
ENSCANG00000028962	RIF1	65	50.476	ENSGAFG00000017196	rif1	70	53.048	Gambusia_affinis
ENSCANG00000028962	RIF1	61	54.626	ENSGACG00000008579	rif1	69	54.618	Gasterosteus_aculeatus
ENSCANG00000028962	RIF1	87	78.571	ENSGAGG00000012595	RIF1	92	80.357	Gopherus_agassizii
ENSCANG00000028962	RIF1	89	98.856	ENSGGOG00000040178	RIF1	92	98.856	Gorilla_gorilla
ENSCANG00000028962	RIF1	71	51.494	ENSHBUG00000007125	rif1	78	50.236	Haplochromis_burtoni
ENSCANG00000028962	RIF1	99	75.075	ENSHGLG00100009807	RIF1	99	74.638	Heterocephalus_glaber_male
ENSCANG00000028962	RIF1	62	55.263	ENSHCOG00000015943	rif1	55	55.263	Hippocampus_comes
ENSCANG00000028962	RIF1	61	59.031	ENSIPUG00000021703	rif1	59	59.031	Ictalurus_punctatus
ENSCANG00000028962	RIF1	100	77.020	ENSSTOG00000020712	RIF1	100	76.021	Ictidomys_tridecemlineatus
ENSCANG00000028962	RIF1	100	69.393	ENSJJAG00000023000	Rif1	100	68.523	Jaculus_jaculus
ENSCANG00000028962	RIF1	53	49.567	ENSKMAG00000002852	rif1	53	49.567	Kryptolebias_marmoratus
ENSCANG00000028962	RIF1	62	57.269	ENSLBEG00000023196	rif1	55	57.269	Labrus_bergylta
ENSCANG00000028962	RIF1	84	70.485	ENSLACG00000005425	RIF1	84	70.485	Latimeria_chalumnae
ENSCANG00000028962	RIF1	61	60.190	ENSLOCG00000002657	rif1	78	62.559	Lepisosteus_oculatus
ENSCANG00000028962	RIF1	100	77.366	ENSLAFG00000009796	RIF1	100	76.753	Loxodonta_africana
ENSCANG00000028962	RIF1	100	97.166	ENSMFAG00000032233	RIF1	100	95.914	Macaca_fascicularis
ENSCANG00000028962	RIF1	100	97.166	ENSMMUG00000008611	RIF1	100	95.874	Macaca_mulatta
ENSCANG00000028962	RIF1	100	97.081	ENSMNEG00000031616	RIF1	100	95.833	Macaca_nemestrina
ENSCANG00000028962	RIF1	100	97.166	ENSMLEG00000042945	RIF1	100	95.874	Mandrillus_leucophaeus
ENSCANG00000028962	RIF1	74	57.333	ENSMAMG00000001745	rif1	61	57.080	Mastacembelus_armatus
ENSCANG00000028962	RIF1	62	57.080	ENSMZEG00005020920	rif1	64	57.080	Maylandia_zebra
ENSCANG00000028962	RIF1	83	74.324	ENSMGAG00000012732	RIF1	85	74.324	Meleagris_gallopavo
ENSCANG00000028962	RIF1	94	90.251	ENSMAUG00000013158	Rif1	94	90.251	Mesocricetus_auratus
ENSCANG00000028962	RIF1	100	83.488	ENSMICG00000046127	RIF1	100	82.628	Microcebus_murinus
ENSCANG00000028962	RIF1	100	69.688	ENSMOCG00000009381	Rif1	100	68.790	Microtus_ochrogaster
ENSCANG00000028962	RIF1	52	49.960	ENSMMOG00000006519	rif1	51	49.960	Mola_mola
ENSCANG00000028962	RIF1	100	59.758	ENSMODG00000003703	RIF1	100	59.040	Monodelphis_domestica
ENSCANG00000028962	RIF1	67	47.871	ENSMALG00000016759	rif1	72	48.106	Monopterus_albus
ENSCANG00000028962	RIF1	100	68.634	MGP_CAROLIEiJ_G0023555	Rif1	100	68.173	Mus_caroli
ENSCANG00000028962	RIF1	100	69.282	ENSMUSG00000036202	Rif1	100	68.712	Mus_musculus
ENSCANG00000028962	RIF1	100	67.749	MGP_PahariEiJ_G0025006	Rif1	100	67.285	Mus_pahari
ENSCANG00000028962	RIF1	100	69.095	MGP_SPRETEiJ_G0024476	Rif1	100	68.372	Mus_spretus
ENSCANG00000028962	RIF1	100	79.209	ENSMPUG00000000371	RIF1	100	78.583	Mustela_putorius_furo
ENSCANG00000028962	RIF1	90	76.658	ENSMLUG00000003376	RIF1	100	76.658	Myotis_lucifugus
ENSCANG00000028962	RIF1	100	72.693	ENSNGAG00000009268	Rif1	100	71.480	Nannospalax_galili
ENSCANG00000028962	RIF1	61	56.889	ENSNBRG00000014257	rif1	64	56.637	Neolamprologus_brichardi
ENSCANG00000028962	RIF1	100	93.053	ENSNLEG00000010955	RIF1	100	92.633	Nomascus_leucogenys
ENSCANG00000028962	RIF1	81	78.222	ENSMEUG00000007601	-	88	78.222	Notamacropus_eugenii
ENSCANG00000028962	RIF1	100	71.116	ENSODEG00000003950	RIF1	99	70.991	Octodon_degus
ENSCANG00000028962	RIF1	65	46.198	ENSONIG00000013657	rif1	63	49.274	Oreochromis_niloticus
ENSCANG00000028962	RIF1	83	75.484	ENSOANG00000006078	-	81	73.102	Ornithorhynchus_anatinus
ENSCANG00000028962	RIF1	100	76.211	ENSOCUG00000017435	RIF1	100	75.333	Oryctolagus_cuniculus
ENSCANG00000028962	RIF1	63	49.248	ENSORLG00020001302	rif1	69	47.896	Oryzias_latipes_hni
ENSCANG00000028962	RIF1	61	56.250	ENSORLG00015000009	rif1	61	56.250	Oryzias_latipes_hsok
ENSCANG00000028962	RIF1	61	57.073	ENSOMEG00000021513	rif1	61	57.073	Oryzias_melastigma
ENSCANG00000028962	RIF1	100	80.581	ENSOGAG00000006141	RIF1	99	79.847	Otolemur_garnettii
ENSCANG00000028962	RIF1	100	78.611	ENSOARG00000008930	RIF1	100	78.091	Ovis_aries
ENSCANG00000028962	RIF1	100	94.675	ENSPPAG00000023754	RIF1	100	93.533	Pan_paniscus
ENSCANG00000028962	RIF1	100	79.025	ENSPPRG00000003618	RIF1	100	78.528	Panthera_pardus
ENSCANG00000028962	RIF1	100	79.067	ENSPTIG00000020652	RIF1	100	78.569	Panthera_tigris_altaica
ENSCANG00000028962	RIF1	100	94.717	ENSPTRG00000012534	RIF1	100	93.614	Pan_troglodytes
ENSCANG00000028962	RIF1	100	96.870	ENSPANG00000008525	RIF1	100	95.631	Papio_anubis
ENSCANG00000028962	RIF1	62	58.000	ENSPKIG00000004267	rif1	64	58.000	Paramormyrops_kingsleyae
ENSCANG00000028962	RIF1	65	46.148	ENSPMGG00000016141	rif1	81	44.684	Periophthalmus_magnuspinnatus
ENSCANG00000028962	RIF1	99	71.172	ENSPEMG00000000446	Rif1	99	70.458	Peromyscus_maniculatus_bairdii
ENSCANG00000028962	RIF1	98	64.989	ENSPCIG00000009185	RIF1	99	58.641	Phascolarctos_cinereus
ENSCANG00000028962	RIF1	58	51.056	ENSPFOG00000000554	-	67	50.964	Poecilia_formosa
ENSCANG00000028962	RIF1	62	53.982	ENSPFOG00000017804	rif1	69	49.761	Poecilia_formosa
ENSCANG00000028962	RIF1	66	50.186	ENSPLAG00000017945	rif1	74	48.632	Poecilia_latipinna
ENSCANG00000028962	RIF1	52	56.250	ENSPMEG00000006897	-	66	48.984	Poecilia_mexicana
ENSCANG00000028962	RIF1	57	64.045	ENSPREG00000018052	rif1	59	64.045	Poecilia_reticulata
ENSCANG00000028962	RIF1	100	95.011	ENSPPYG00000012846	RIF1	100	93.813	Pongo_abelii
ENSCANG00000028962	RIF1	83	89.109	ENSPCAG00000009032	RIF1	83	89.109	Procavia_capensis
ENSCANG00000028962	RIF1	100	83.734	ENSPCOG00000027888	RIF1	100	83.071	Propithecus_coquereli
ENSCANG00000028962	RIF1	95	89.069	ENSPVAG00000014276	RIF1	94	89.069	Pteropus_vampyrus
ENSCANG00000028962	RIF1	71	49.404	ENSPNYG00000012940	rif1	79	47.943	Pundamilia_nyererei
ENSCANG00000028962	RIF1	61	62.981	ENSPNAG00000016685	rif1	60	62.981	Pygocentrus_nattereri
ENSCANG00000028962	RIF1	100	68.052	ENSRNOG00000054901	Rif1	100	67.523	Rattus_norvegicus
ENSCANG00000028962	RIF1	100	96.997	ENSRBIG00000003704	RIF1	100	95.833	Rhinopithecus_bieti
ENSCANG00000028962	RIF1	100	98.223	ENSRROG00000028206	RIF1	100	96.966	Rhinopithecus_roxellana
ENSCANG00000028962	RIF1	97	97.849	ENSSBOG00000029530	RIF1	99	97.849	Saimiri_boliviensis_boliviensis
ENSCANG00000028962	RIF1	100	59.197	ENSSHAG00000018552	RIF1	99	58.807	Sarcophilus_harrisii
ENSCANG00000028962	RIF1	61	57.466	ENSSFOG00015021539	rif1	65	57.466	Scleropages_formosus
ENSCANG00000028962	RIF1	64	49.881	ENSSMAG00000011704	rif1	64	48.848	Scophthalmus_maximus
ENSCANG00000028962	RIF1	61	58.590	ENSSDUG00000015632	rif1	67	58.590	Seriola_dumerili
ENSCANG00000028962	RIF1	52	50.238	ENSSLDG00000019531	rif1	54	47.574	Seriola_lalandi_dorsalis
ENSCANG00000028962	RIF1	63	83.784	ENSSARG00000007161	-	64	83.784	Sorex_araneus
ENSCANG00000028962	RIF1	93	77.434	ENSSPUG00000003062	RIF1	90	77.434	Sphenodon_punctatus
ENSCANG00000028962	RIF1	100	79.125	ENSSSCG00000016395	RIF1	100	78.180	Sus_scrofa
ENSCANG00000028962	RIF1	68	56.652	ENSTRUG00000015808	rif1	69	56.652	Takifugu_rubripes
ENSCANG00000028962	RIF1	66	56.322	ENSTNIG00000011538	rif1	76	47.464	Tetraodon_nigroviridis
ENSCANG00000028962	RIF1	82	96.078	ENSTBEG00000016082	RIF1	77	96.078	Tupaia_belangeri
ENSCANG00000028962	RIF1	100	79.874	ENSTTRG00000011190	RIF1	100	79.380	Tursiops_truncatus
ENSCANG00000028962	RIF1	91	79.447	ENSUAMG00000026385	RIF1	99	79.447	Ursus_americanus
ENSCANG00000028962	RIF1	100	79.958	ENSUMAG00000000337	RIF1	100	79.252	Ursus_maritimus
ENSCANG00000028962	RIF1	100	77.675	ENSVPAG00000002162	RIF1	100	77.044	Vicugna_pacos
ENSCANG00000028962	RIF1	100	77.633	ENSVVUG00000011293	RIF1	100	76.833	Vulpes_vulpes
ENSCANG00000028962	RIF1	99	43.894	ENSXETG00000004530	rif1	57	50.035	Xenopus_tropicalis
ENSCANG00000028962	RIF1	64	48.273	ENSXMAG00000000506	rif1	66	47.463	Xiphophorus_maculatus