EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCANG00000029082 (Gene tree)
Gene ID
105506342
Gene Symbol
YTHDF1
Alias
C20orf21|FLJ20391
Full Name
YTH N6-methyladenosine RNA binding protein 1
Gene Type
protein_coding
Species
Colobus_angolensis_palliatus
Status
putative
Strand
Plus strand
Length
20067 bases
Position
chrKN979785.1:1350227-1370293
Accession
105506342
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCANP00000011341YTHPF04146.152.3e-4111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCANT00000034238YTHDF1-2013055XM_011934434ENSCANP00000011341561 (aa)XP_011789824A0A2K5I461
ENSCANT00000034253YTHDF1-202132-ENSCANP0000001135643 (aa)-A0A2K5I477
Gene Model
Click here to download ENSCANG00000029082's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000029082's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCANG00000029082YTHDF19763.385ENSCANG00000016001YTHDF210064.794
ENSCANG00000029082YTHDF19866.724ENSCANG00000032631YTHDF39966.836
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCANG00000029082YTHDF19898.548ENSG00000149658YTHDF19998.548Homo_sapiens
ENSCANG00000029082YTHDF19776.814ENSAPOG00000010796YTHDF19775.929Acanthochromis_polyacanthus
ENSCANG00000029082YTHDF19374.908ENSAPOG00000004358ythdf19474.499Acanthochromis_polyacanthus
ENSCANG00000029082YTHDF19993.190ENSAMEG00000017323YTHDF19993.190Ailuropoda_melanoleuca
ENSCANG00000029082YTHDF19371.455ENSACIG00000011264ythdf19471.661Amphilophus_citrinellus
ENSCANG00000029082YTHDF110074.439ENSACIG00000020083YTHDF110072.913Amphilophus_citrinellus
ENSCANG00000029082YTHDF19771.212ENSAOCG00000022251ythdf19575.046Amphiprion_ocellaris
ENSCANG00000029082YTHDF19775.986ENSAOCG00000012567YTHDF19775.311Amphiprion_ocellaris
ENSCANG00000029082YTHDF19776.165ENSAPEG00000008750YTHDF19775.488Amphiprion_percula
ENSCANG00000029082YTHDF19570.984ENSAPEG00000021878ythdf19471.331Amphiprion_percula
ENSCANG00000029082YTHDF19373.567ENSATEG00000023840ythdf19671.631Anabas_testudineus
ENSCANG00000029082YTHDF19775.045ENSATEG00000005996YTHDF19774.205Anabas_testudineus
ENSCANG00000029082YTHDF19988.669ENSAPLG00000005985YTHDF19989.928Anas_platyrhynchos
ENSCANG00000029082YTHDF19885.688ENSACAG00000005560YTHDF19985.688Anolis_carolinensis
ENSCANG00000029082YTHDF19882.940ENSANAG00000021022-9882.940Aotus_nancymaae
ENSCANG00000029082YTHDF19897.096ENSANAG00000034786-10097.053Aotus_nancymaae
ENSCANG00000029082YTHDF19775.806ENSACLG00000025518YTHDF19775.133Astatotilapia_calliptera
ENSCANG00000029082YTHDF19888.929ENSBTAG00000010383YTHDF110088.212Bos_taurus
ENSCANG00000029082YTHDF19897.459ENSCJAG00000010056YTHDF19997.459Callithrix_jacchus
ENSCANG00000029082YTHDF19192.913ENSCAFG00000012772YTHDF19992.913Canis_familiaris
ENSCANG00000029082YTHDF19192.913ENSCAFG00020001214YTHDF19992.913Canis_lupus_dingo
ENSCANG00000029082YTHDF19887.840ENSCHIG00000026494YTHDF19987.840Capra_hircus
ENSCANG00000029082YTHDF19993.514ENSTSYG00000033436YTHDF19993.514Carlito_syrichta
ENSCANG00000029082YTHDF19791.360ENSCAPG00000002544YTHDF19491.360Cavia_aperea
ENSCANG00000029082YTHDF19893.103ENSCPOG00000010202YTHDF19993.103Cavia_porcellus
ENSCANG00000029082YTHDF19897.459ENSCCAG00000024650YTHDF19997.459Cebus_capucinus
ENSCANG00000029082YTHDF19899.637ENSCATG00000033272YTHDF19999.637Cercocebus_atys
ENSCANG00000029082YTHDF19894.384ENSCLAG00000005989YTHDF19993.841Chinchilla_lanigera
ENSCANG00000029082YTHDF19899.819ENSCSAG00000016266YTHDF19999.819Chlorocebus_sabaeus
ENSCANG00000029082YTHDF19890.036ENSCPBG00000027183YTHDF19990.036Chrysemys_picta_bellii
ENSCANG00000029082YTHDF19894.192ENSCGRG00001016568Ythdf19994.192Cricetulus_griseus_chok1gshd
ENSCANG00000029082YTHDF19894.182ENSCGRG00000009207Ythdf110094.182Cricetulus_griseus_crigri
ENSCANG00000029082YTHDF19373.258ENSCSEG00000020623YTHDF19574.206Cynoglossus_semilaevis
ENSCANG00000029082YTHDF19572.263ENSCVAG00000017940ythdf19572.694Cyprinodon_variegatus
ENSCANG00000029082YTHDF19773.214ENSCVAG00000014378YTHDF19974.643Cyprinodon_variegatus
ENSCANG00000029082YTHDF19870.462ENSDARG00000016447ythdf19472.837Danio_rerio
ENSCANG00000029082YTHDF19889.474ENSDNOG00000043590YTHDF19989.474Dasypus_novemcinctus
ENSCANG00000029082YTHDF19887.348ENSDORG00000002879Ythdf110087.348Dipodomys_ordii
ENSCANG00000029082YTHDF17963.462ENSETEG00000017860-9863.462Echinops_telfairi
ENSCANG00000029082YTHDF19893.829ENSEASG00005023186YTHDF19993.829Equus_asinus_asinus
ENSCANG00000029082YTHDF19793.911ENSECAG00000019475YTHDF110094.106Equus_caballus
ENSCANG00000029082YTHDF19290.874ENSEEUG00000007461YTHDF110090.874Erinaceus_europaeus
ENSCANG00000029082YTHDF19474.265ENSELUG00000001906YTHDF19972.072Esox_lucius
ENSCANG00000029082YTHDF19672.727ENSELUG00000022768ythdf19774.825Esox_lucius
ENSCANG00000029082YTHDF19892.377ENSFCAG00000008917YTHDF19992.377Felis_catus
ENSCANG00000029082YTHDF19889.674ENSFALG00000010463YTHDF19989.674Ficedula_albicollis
ENSCANG00000029082YTHDF19893.466ENSFDAG00000019602YTHDF19993.466Fukomys_damarensis
ENSCANG00000029082YTHDF19774.776ENSFHEG00000002540YTHDF19973.982Fundulus_heteroclitus
ENSCANG00000029082YTHDF19572.727ENSFHEG00000023218ythdf19671.978Fundulus_heteroclitus
ENSCANG00000029082YTHDF18489.231ENSGMOG00000019610ythdf19469.844Gadus_morhua
ENSCANG00000029082YTHDF19888.788ENSGALG00000005745YTHDF110090.020Gallus_gallus
ENSCANG00000029082YTHDF19773.656ENSGAFG00000021100YTHDF19974.464Gambusia_affinis
ENSCANG00000029082YTHDF19873.630ENSGACG00000002613YTHDF19972.945Gasterosteus_aculeatus
ENSCANG00000029082YTHDF19571.886ENSGACG00000012014ythdf19471.303Gasterosteus_aculeatus
ENSCANG00000029082YTHDF19890.036ENSGAGG00000003007YTHDF19990.036Gopherus_agassizii
ENSCANG00000029082YTHDF19998.553ENSGGOG00000008340YTHDF19998.911Gorilla_gorilla
ENSCANG00000029082YTHDF19571.303ENSHBUG00000011284ythdf19671.942Haplochromis_burtoni
ENSCANG00000029082YTHDF19775.627ENSHBUG00000004875YTHDF19774.956Haplochromis_burtoni
ENSCANG00000029082YTHDF19894.192ENSHGLG00000006585YTHDF19994.192Heterocephalus_glaber_female
ENSCANG00000029082YTHDF19894.192ENSHGLG00100004683YTHDF19994.192Heterocephalus_glaber_male
ENSCANG00000029082YTHDF19771.404ENSHCOG00000008866ythdf19671.012Hippocampus_comes
ENSCANG00000029082YTHDF19870.799ENSHCOG00000011303YTHDF110074.449Hippocampus_comes
ENSCANG00000029082YTHDF19776.545ENSIPUG00000000425Ythdf19875.671Ictalurus_punctatus
ENSCANG00000029082YTHDF19894.203ENSSTOG00000023001YTHDF110094.203Ictidomys_tridecemlineatus
ENSCANG00000029082YTHDF19894.909ENSJJAG00000013589Ythdf110094.909Jaculus_jaculus
ENSCANG00000029082YTHDF19774.464ENSKMAG00000017472YTHDF19974.733Kryptolebias_marmoratus
ENSCANG00000029082YTHDF19373.557ENSKMAG00000005595ythdf19672.810Kryptolebias_marmoratus
ENSCANG00000029082YTHDF19775.709ENSLBEG00000012068YTHDF19875.709Labrus_bergylta
ENSCANG00000029082YTHDF19373.284ENSLBEG00000014105ythdf19470.690Labrus_bergylta
ENSCANG00000029082YTHDF19682.721ENSLACG00000014195YTHDF19685.019Latimeria_chalumnae
ENSCANG00000029082YTHDF19876.573ENSLOCG00000005020ythdf19378.189Lepisosteus_oculatus
ENSCANG00000029082YTHDF19891.470ENSLAFG00000008884YTHDF19991.470Loxodonta_africana
ENSCANG00000029082YTHDF19899.819ENSMFAG00000042868YTHDF19999.819Macaca_fascicularis
ENSCANG00000029082YTHDF19899.819ENSMMUG00000009227YTHDF19999.819Macaca_mulatta
ENSCANG00000029082YTHDF19899.819ENSMNEG00000030851YTHDF19999.819Macaca_nemestrina
ENSCANG00000029082YTHDF19899.818ENSMLEG00000009252YTHDF110099.818Mandrillus_leucophaeus
ENSCANG00000029082YTHDF19775.763ENSMAMG00000011072YTHDF19774.956Mastacembelus_armatus
ENSCANG00000029082YTHDF19373.333ENSMAMG00000024255ythdf19772.857Mastacembelus_armatus
ENSCANG00000029082YTHDF19373.937ENSMZEG00005026397ythdf19573.126Maylandia_zebra
ENSCANG00000029082YTHDF19775.627ENSMZEG00005023596YTHDF19774.956Maylandia_zebra
ENSCANG00000029082YTHDF19988.193ENSMGAG00000006139YTHDF19989.748Meleagris_gallopavo
ENSCANG00000029082YTHDF19894.192ENSMAUG00000017660Ythdf19994.192Mesocricetus_auratus
ENSCANG00000029082YTHDF19894.918ENSMICG00000032266YTHDF19994.918Microcebus_murinus
ENSCANG00000029082YTHDF19894.011ENSMOCG00000013573Ythdf19994.011Microtus_ochrogaster
ENSCANG00000029082YTHDF19671.088ENSMMOG00000020467YTHDF19272.105Mola_mola
ENSCANG00000029082YTHDF19188.845ENSMODG00000016842YTHDF110090.020Monodelphis_domestica
ENSCANG00000029082YTHDF19372.274ENSMALG00000015672ythdf19372.212Monopterus_albus
ENSCANG00000029082YTHDF19774.468ENSMALG00000022209YTHDF19774.867Monopterus_albus
ENSCANG00000029082YTHDF19894.192MGP_CAROLIEiJ_G0024790Ythdf19994.192Mus_caroli
ENSCANG00000029082YTHDF19894.192ENSMUSG00000038848Ythdf19994.192Mus_musculus
ENSCANG00000029082YTHDF19893.829MGP_PahariEiJ_G0026237Ythdf19993.829Mus_pahari
ENSCANG00000029082YTHDF19894.192MGP_SPRETEiJ_G0025715Ythdf19994.192Mus_spretus
ENSCANG00000029082YTHDF19188.016ENSMPUG00000008111YTHDF110088.409Mustela_putorius_furo
ENSCANG00000029082YTHDF19790.959ENSMLUG00000002241YTHDF19690.959Myotis_lucifugus
ENSCANG00000029082YTHDF19894.374ENSNGAG00000000334Ythdf19994.374Nannospalax_galili
ENSCANG00000029082YTHDF19775.627ENSNBRG00000015321YTHDF19774.956Neolamprologus_brichardi
ENSCANG00000029082YTHDF19670.922ENSNBRG00000008213ythdf19472.527Neolamprologus_brichardi
ENSCANG00000029082YTHDF19580.038ENSOPRG00000001758-9880.497Ochotona_princeps
ENSCANG00000029082YTHDF19892.935ENSODEG00000004380-9992.391Octodon_degus
ENSCANG00000029082YTHDF19873.921ENSODEG00000000074-9875.719Octodon_degus
ENSCANG00000029082YTHDF19371.403ENSONIG00000016799ythdf19471.480Oreochromis_niloticus
ENSCANG00000029082YTHDF19888.788ENSOANG00000003723YTHDF19989.693Ornithorhynchus_anatinus
ENSCANG00000029082YTHDF19981.081ENSOCUG00000012780YTHDF19981.081Oryctolagus_cuniculus
ENSCANG00000029082YTHDF19774.194ENSORLG00000009739YTHDF19974.286Oryzias_latipes
ENSCANG00000029082YTHDF19470.819ENSORLG00000014665YTHDF19370.599Oryzias_latipes
ENSCANG00000029082YTHDF19570.702ENSORLG00020000307ythdf19470.486Oryzias_latipes_hni
ENSCANG00000029082YTHDF19775.455ENSORLG00020001332YTHDF19975.407Oryzias_latipes_hni
ENSCANG00000029082YTHDF19570.526ENSORLG00015006302ythdf19470.312Oryzias_latipes_hsok
ENSCANG00000029082YTHDF19774.014ENSORLG00015018321YTHDF19974.107Oryzias_latipes_hsok
ENSCANG00000029082YTHDF19870.279ENSOMEG00000011843YTHDF19471.701Oryzias_melastigma
ENSCANG00000029082YTHDF19374.164ENSOMEG00000002941YTHDF19574.217Oryzias_melastigma
ENSCANG00000029082YTHDF19892.922ENSOGAG00000000480YTHDF19992.922Otolemur_garnettii
ENSCANG00000029082YTHDF19983.453ENSOARG00000011639YTHDF19984.892Ovis_aries
ENSCANG00000029082YTHDF19998.553ENSPPAG00000023277YTHDF110098.911Pan_paniscus
ENSCANG00000029082YTHDF19892.559ENSPPRG00000020805YTHDF19992.559Panthera_pardus
ENSCANG00000029082YTHDF19875.495ENSPTIG00000017355YTHDF19981.802Panthera_tigris_altaica
ENSCANG00000029082YTHDF19998.553ENSPTRG00000013730YTHDF19998.911Pan_troglodytes
ENSCANG00000029082YTHDF19899.819ENSPANG00000021472YTHDF19999.819Papio_anubis
ENSCANG00000029082YTHDF19771.841ENSPKIG00000005026YTHDF19771.143Paramormyrops_kingsleyae
ENSCANG00000029082YTHDF19769.982ENSPKIG00000005427ythdf19772.022Paramormyrops_kingsleyae
ENSCANG00000029082YTHDF19788.321ENSPSIG00000005529YTHDF19689.425Pelodiscus_sinensis
ENSCANG00000029082YTHDF19773.504ENSPMGG00000009101YTHDF19973.711Periophthalmus_magnuspinnatus
ENSCANG00000029082YTHDF19371.558ENSPMGG00000015328ythdf19672.302Periophthalmus_magnuspinnatus
ENSCANG00000029082YTHDF19894.182ENSPEMG00000020199Ythdf110094.182Peromyscus_maniculatus_bairdii
ENSCANG00000029082YTHDF19788.828ENSPCIG00000017170YTHDF110090.020Phascolarctos_cinereus
ENSCANG00000029082YTHDF19770.377ENSPFOG00000005405ythdf19471.404Poecilia_formosa
ENSCANG00000029082YTHDF19870.473ENSPLAG00000006298YTHDF19471.355Poecilia_latipinna
ENSCANG00000029082YTHDF19573.866ENSPLAG00000006653ythdf19573.889Poecilia_latipinna
ENSCANG00000029082YTHDF19773.297ENSPMEG00000020969-9773.882Poecilia_mexicana
ENSCANG00000029082YTHDF19573.273ENSPMEG00000023753ythdf19573.198Poecilia_mexicana
ENSCANG00000029082YTHDF19770.132ENSPREG00000017662YTHDF19371.553Poecilia_reticulata
ENSCANG00000029082YTHDF19573.042ENSPREG00000002173ythdf19573.704Poecilia_reticulata
ENSCANG00000029082YTHDF18699.500ENSPPYG00000011226YTHDF110099.500Pongo_abelii
ENSCANG00000029082YTHDF18885.859ENSPCAG00000002452YTHDF19885.772Procavia_capensis
ENSCANG00000029082YTHDF19895.281ENSPCOG00000025969YTHDF19995.281Propithecus_coquereli
ENSCANG00000029082YTHDF19783.640ENSPVAG00000017568YTHDF19783.613Pteropus_vampyrus
ENSCANG00000029082YTHDF19775.627ENSPNYG00000002266YTHDF19774.956Pundamilia_nyererei
ENSCANG00000029082YTHDF19373.937ENSPNYG00000014007ythdf19573.126Pundamilia_nyererei
ENSCANG00000029082YTHDF19870.861ENSPNAG00000012447ythdf19873.404Pygocentrus_nattereri
ENSCANG00000029082YTHDF19893.829ENSRNOG00000027015Ythdf19993.829Rattus_norvegicus
ENSCANG00000029082YTHDF110098.396ENSRBIG00000044959YTHDF110098.396Rhinopithecus_bieti
ENSCANG00000029082YTHDF110098.217ENSRROG00000033014YTHDF110098.217Rhinopithecus_roxellana
ENSCANG00000029082YTHDF19795.387ENSSBOG00000027278YTHDF110095.285Saimiri_boliviensis_boliviensis
ENSCANG00000029082YTHDF19988.489ENSSHAG00000010430YTHDF18989.748Sarcophilus_harrisii
ENSCANG00000029082YTHDF19874.423ENSSFOG00015000284ythdf19576.199Scleropages_formosus
ENSCANG00000029082YTHDF19675.355ENSSMAG00000007635YTHDF19373.262Scophthalmus_maximus
ENSCANG00000029082YTHDF17282.781ENSSMAG00000013715ythdf19464.103Scophthalmus_maximus
ENSCANG00000029082YTHDF19875.485ENSSDUG00000015823YTHDF19975.485Seriola_dumerili
ENSCANG00000029082YTHDF19374.861ENSSDUG00000000435ythdf19474.270Seriola_dumerili
ENSCANG00000029082YTHDF19772.810ENSSLDG00000001054YTHDF19773.540Seriola_lalandi_dorsalis
ENSCANG00000029082YTHDF19570.690ENSSLDG00000024948ythdf19470.698Seriola_lalandi_dorsalis
ENSCANG00000029082YTHDF19187.059ENSSPUG00000015143YTHDF110087.059Sphenodon_punctatus
ENSCANG00000029082YTHDF19775.448ENSSPAG00000003666YTHDF19674.778Stegastes_partitus
ENSCANG00000029082YTHDF19569.125ENSSPAG00000014989ythdf19470.000Stegastes_partitus
ENSCANG00000029082YTHDF19988.750ENSSSCG00000040086YTHDF19989.312Sus_scrofa
ENSCANG00000029082YTHDF19888.427ENSTGUG00000007565YTHDF110089.873Taeniopygia_guttata
ENSCANG00000029082YTHDF19771.672ENSTRUG00000004288ythdf19670.884Takifugu_rubripes
ENSCANG00000029082YTHDF19570.307ENSTRUG00000005049YTHDF19770.940Takifugu_rubripes
ENSCANG00000029082YTHDF19871.377ENSTNIG00000012490ythdf19872.064Tetraodon_nigroviridis
ENSCANG00000029082YTHDF19872.518ENSTNIG00000003975YTHDF19972.487Tetraodon_nigroviridis
ENSCANG00000029082YTHDF19589.513ENSTTRG00000001804YTHDF19589.524Tursiops_truncatus
ENSCANG00000029082YTHDF19793.358ENSUAMG00000011021YTHDF110093.124Ursus_americanus
ENSCANG00000029082YTHDF19192.731ENSUMAG00000022290YTHDF110092.731Ursus_maritimus
ENSCANG00000029082YTHDF19192.520ENSVVUG00000015275YTHDF19992.520Vulpes_vulpes
ENSCANG00000029082YTHDF19781.341ENSXETG00000027086ythdf19483.521Xenopus_tropicalis
ENSCANG00000029082YTHDF19572.595ENSXCOG00000002490ythdf19373.333Xiphophorus_couchianus
ENSCANG00000029082YTHDF19770.978ENSXCOG00000008115YTHDF19471.902Xiphophorus_couchianus
ENSCANG00000029082YTHDF19774.419ENSXMAG00000015644YTHDF19974.733Xiphophorus_maculatus
ENSCANG00000029082YTHDF19572.678ENSXMAG00000008525ythdf19473.567Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us