EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCANG00000029091 (Gene tree)
Gene ID: 105510019
Gene Symbol: ZC3HC1
Alias: NIPA
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Minus strand
Length: 48955 bases
Position: chrKN980296.1:2475203-2524157
Accession: 105510019
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000011414	zf-C3HC	PF07967.13	2.2e-37	1	1
ENSCANP00000011411	zf-C3HC	PF07967.13	5.3e-36	1	1
ENSCANP00000011411	Rsm1	PF08600.10	2.6e-15	1	1
ENSCANP00000011414	Rsm1	PF08600.10	3.7e-15	1	2
ENSCANP00000011414	Rsm1	PF08600.10	3.7e-15	2	2
ENSCANP00000011422	Rsm1	PF08600.10	0.00027	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000034313	ZC3HC1-202	1754	XM_011939595	ENSCANP00000011414	431 (aa)	XP_011794985	A0A2K5I451
ENSCANT00000034310	ZC3HC1-201	1967	XM_011939594	ENSCANP00000011411	502 (aa)	XP_011794984	A0A2K5I4D7
ENSCANT00000034321	ZC3HC1-203	627	-	ENSCANP00000011422	208 (aa)	-	A0A2K5I4H8

Gene Model

Click here to download ENSCANG00000029091's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000029091's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000029091	ZC3HC1	99	98.605	ENSG00000091732	ZC3HC1	100	97.959	Homo_sapiens
ENSCANG00000029091	ZC3HC1	93	46.809	ENSAPOG00000009078	zc3hc1	95	42.886	Acanthochromis_polyacanthus
ENSCANG00000029091	ZC3HC1	100	91.071	ENSAMEG00000005425	ZC3HC1	100	91.071	Ailuropoda_melanoleuca
ENSCANG00000029091	ZC3HC1	92	46.341	ENSACIG00000019513	zc3hc1	95	42.254	Amphilophus_citrinellus
ENSCANG00000029091	ZC3HC1	94	47.006	ENSAOCG00000024310	zc3hc1	95	44.040	Amphiprion_ocellaris
ENSCANG00000029091	ZC3HC1	94	47.006	ENSAPEG00000004907	zc3hc1	95	44.040	Amphiprion_percula
ENSCANG00000029091	ZC3HC1	78	50.345	ENSATEG00000016898	zc3hc1	85	46.244	Anabas_testudineus
ENSCANG00000029091	ZC3HC1	96	61.765	ENSAPLG00000003832	ZC3HC1	99	60.449	Anas_platyrhynchos
ENSCANG00000029091	ZC3HC1	95	61.031	ENSACAG00000001638	ZC3HC1	95	61.031	Anolis_carolinensis
ENSCANG00000029091	ZC3HC1	100	97.115	ENSANAG00000022213	ZC3HC1	100	97.115	Aotus_nancymaae
ENSCANG00000029091	ZC3HC1	83	48.443	ENSACLG00000025033	zc3hc1	94	44.222	Astatotilapia_calliptera
ENSCANG00000029091	ZC3HC1	93	46.769	ENSAMXG00000036792	zc3hc1	97	44.606	Astyanax_mexicanus
ENSCANG00000029091	ZC3HC1	100	90.837	ENSBTAG00000011247	ZC3HC1	100	90.837	Bos_taurus
ENSCANG00000029091	ZC3HC1	100	96.635	ENSCJAG00000010536	ZC3HC1	100	96.635	Callithrix_jacchus
ENSCANG00000029091	ZC3HC1	100	92.629	ENSCAFG00000028735	-	100	92.629	Canis_familiaris
ENSCANG00000029091	ZC3HC1	100	92.629	ENSCAFG00000029401	-	99	92.629	Canis_familiaris
ENSCANG00000029091	ZC3HC1	100	92.629	ENSCAFG00000031850	-	100	92.629	Canis_familiaris
ENSCANG00000029091	ZC3HC1	100	92.475	ENSCAFG00000001499	-	99	92.475	Canis_familiaris
ENSCANG00000029091	ZC3HC1	100	92.430	ENSCAFG00020006829	-	100	92.430	Canis_lupus_dingo
ENSCANG00000029091	ZC3HC1	100	91.468	ENSCAFG00020023333	-	100	91.468	Canis_lupus_dingo
ENSCANG00000029091	ZC3HC1	96	88.500	ENSCHIG00000014103	ZC3HC1	100	84.462	Capra_hircus
ENSCANG00000029091	ZC3HC1	100	91.036	ENSTSYG00000002843	ZC3HC1	100	91.036	Carlito_syrichta
ENSCANG00000029091	ZC3HC1	96	81.000	ENSCAPG00000016300	ZC3HC1	93	80.347	Cavia_aperea
ENSCANG00000029091	ZC3HC1	100	86.079	ENSCPOG00000014034	ZC3HC1	100	86.079	Cavia_porcellus
ENSCANG00000029091	ZC3HC1	100	97.115	ENSCCAG00000020384	ZC3HC1	100	97.115	Cebus_capucinus
ENSCANG00000029091	ZC3HC1	100	99.402	ENSCATG00000023130	ZC3HC1	100	99.402	Cercocebus_atys
ENSCANG00000029091	ZC3HC1	96	84.500	ENSCLAG00000008260	ZC3HC1	100	61.554	Chinchilla_lanigera
ENSCANG00000029091	ZC3HC1	99	96.585	ENSCSAG00000009881	ZC3HC1	97	98.634	Chlorocebus_sabaeus
ENSCANG00000029091	ZC3HC1	97	87.255	ENSCHOG00000011846	ZC3HC1	99	90.687	Choloepus_hoffmanni
ENSCANG00000029091	ZC3HC1	96	68.107	ENSCPBG00000017519	ZC3HC1	100	67.262	Chrysemys_picta_bellii
ENSCANG00000029091	ZC3HC1	100	86.853	ENSCGRG00001018805	Zc3hc1	100	86.853	Cricetulus_griseus_chok1gshd
ENSCANG00000029091	ZC3HC1	99	86.829	ENSCGRG00000017114	Zc3hc1	100	85.657	Cricetulus_griseus_crigri
ENSCANG00000029091	ZC3HC1	96	43.000	ENSCSEG00000009284	zc3hc1	94	42.400	Cynoglossus_semilaevis
ENSCANG00000029091	ZC3HC1	94	41.870	ENSCVAG00000011566	zc3hc1	94	41.260	Cyprinodon_variegatus
ENSCANG00000029091	ZC3HC1	95	46.407	ENSDARG00000062651	zc3hc1	95	45.791	Danio_rerio
ENSCANG00000029091	ZC3HC1	100	89.641	ENSDNOG00000045016	ZC3HC1	100	89.641	Dasypus_novemcinctus
ENSCANG00000029091	ZC3HC1	99	82.927	ENSDORG00000008697	Zc3hc1	100	78.486	Dipodomys_ordii
ENSCANG00000029091	ZC3HC1	99	88.293	ENSEASG00005008789	ZC3HC1	97	92.257	Equus_asinus_asinus
ENSCANG00000029091	ZC3HC1	100	91.849	ENSECAG00000017886	ZC3HC1	100	91.849	Equus_caballus
ENSCANG00000029091	ZC3HC1	84	84.568	ENSEEUG00000003123	ZC3HC1	84	84.568	Erinaceus_europaeus
ENSCANG00000029091	ZC3HC1	94	43.205	ENSELUG00000023168	zc3hc1	94	44.646	Esox_lucius
ENSCANG00000029091	ZC3HC1	100	91.434	ENSFCAG00000010429	ZC3HC1	100	91.434	Felis_catus
ENSCANG00000029091	ZC3HC1	92	59.500	ENSFALG00000005006	ZC3HC1	100	60.256	Ficedula_albicollis
ENSCANG00000029091	ZC3HC1	100	87.935	ENSFDAG00000019897	ZC3HC1	100	87.935	Fukomys_damarensis
ENSCANG00000029091	ZC3HC1	96	42.857	ENSFHEG00000020149	zc3hc1	99	40.891	Fundulus_heteroclitus
ENSCANG00000029091	ZC3HC1	94	41.942	ENSGMOG00000002914	zc3hc1	95	42.116	Gadus_morhua
ENSCANG00000029091	ZC3HC1	99	61.952	ENSGALG00000008003	ZC3HC1	99	61.952	Gallus_gallus
ENSCANG00000029091	ZC3HC1	96	43.030	ENSGAFG00000016095	zc3hc1	96	42.455	Gambusia_affinis
ENSCANG00000029091	ZC3HC1	93	47.432	ENSGACG00000019706	zc3hc1	94	45.492	Gasterosteus_aculeatus
ENSCANG00000029091	ZC3HC1	98	63.592	ENSGAGG00000016106	ZC3HC1	100	69.054	Gopherus_agassizii
ENSCANG00000029091	ZC3HC1	99	99.034	ENSGGOG00000015504	ZC3HC1	99	99.034	Gorilla_gorilla
ENSCANG00000029091	ZC3HC1	92	45.427	ENSHBUG00000008347	zc3hc1	94	42.740	Haplochromis_burtoni
ENSCANG00000029091	ZC3HC1	100	88.845	ENSHGLG00000005085	ZC3HC1	100	88.845	Heterocephalus_glaber_female
ENSCANG00000029091	ZC3HC1	100	88.645	ENSHGLG00100011395	ZC3HC1	100	88.645	Heterocephalus_glaber_male
ENSCANG00000029091	ZC3HC1	95	42.566	ENSHCOG00000014309	zc3hc1	95	42.159	Hippocampus_comes
ENSCANG00000029091	ZC3HC1	100	89.641	ENSSTOG00000023599	-	100	89.641	Ictidomys_tridecemlineatus
ENSCANG00000029091	ZC3HC1	93	47.335	ENSKMAG00000015315	zc3hc1	88	42.449	Kryptolebias_marmoratus
ENSCANG00000029091	ZC3HC1	94	45.506	ENSLBEG00000017325	zc3hc1	95	43.366	Labrus_bergylta
ENSCANG00000029091	ZC3HC1	80	53.955	ENSLACG00000013032	ZC3HC1	97	55.501	Latimeria_chalumnae
ENSCANG00000029091	ZC3HC1	99	53.314	ENSLOCG00000015963	zc3hc1	99	51.772	Lepisosteus_oculatus
ENSCANG00000029091	ZC3HC1	100	89.723	ENSLAFG00000001292	ZC3HC1	100	89.723	Loxodonta_africana
ENSCANG00000029091	ZC3HC1	100	99.304	ENSMFAG00000030176	ZC3HC1	100	99.304	Macaca_fascicularis
ENSCANG00000029091	ZC3HC1	100	99.304	ENSMMUG00000006155	ZC3HC1	100	99.304	Macaca_mulatta
ENSCANG00000029091	ZC3HC1	100	99.536	ENSMNEG00000011833	ZC3HC1	100	99.536	Macaca_nemestrina
ENSCANG00000029091	ZC3HC1	100	99.602	ENSMLEG00000027328	ZC3HC1	100	99.602	Mandrillus_leucophaeus
ENSCANG00000029091	ZC3HC1	93	46.809	ENSMAMG00000010691	zc3hc1	95	43.662	Mastacembelus_armatus
ENSCANG00000029091	ZC3HC1	94	43.149	ENSMZEG00005007142	zc3hc1	94	42.536	Maylandia_zebra
ENSCANG00000029091	ZC3HC1	99	61.383	ENSMGAG00000002977	ZC3HC1	99	61.811	Meleagris_gallopavo
ENSCANG00000029091	ZC3HC1	99	84.878	ENSMAUG00000017032	Zc3hc1	92	81.928	Mesocricetus_auratus
ENSCANG00000029091	ZC3HC1	100	93.735	ENSMICG00000009167	ZC3HC1	100	93.735	Microcebus_murinus
ENSCANG00000029091	ZC3HC1	100	86.056	ENSMOCG00000015239	Zc3hc1	100	86.056	Microtus_ochrogaster
ENSCANG00000029091	ZC3HC1	84	48.201	ENSMMOG00000002204	zc3hc1	99	42.291	Mola_mola
ENSCANG00000029091	ZC3HC1	99	71.014	ENSMODG00000014630	ZC3HC1	100	64.038	Monodelphis_domestica
ENSCANG00000029091	ZC3HC1	93	45.609	ENSMALG00000014447	zc3hc1	95	44.444	Monopterus_albus
ENSCANG00000029091	ZC3HC1	100	85.657	MGP_CAROLIEiJ_G0028183	Zc3hc1	100	85.657	Mus_caroli
ENSCANG00000029091	ZC3HC1	100	85.458	ENSMUSG00000039130	Zc3hc1	100	85.458	Mus_musculus
ENSCANG00000029091	ZC3HC1	99	85.366	MGP_PahariEiJ_G0021941	Zc3hc1	100	80.279	Mus_pahari
ENSCANG00000029091	ZC3HC1	100	85.458	MGP_SPRETEiJ_G0029183	Zc3hc1	100	85.458	Mus_spretus
ENSCANG00000029091	ZC3HC1	95	90.605	ENSMPUG00000005297	ZC3HC1	95	90.605	Mustela_putorius_furo
ENSCANG00000029091	ZC3HC1	100	89.703	ENSMLUG00000000063	-	100	89.703	Myotis_lucifugus
ENSCANG00000029091	ZC3HC1	98	79.710	ENSMLUG00000029228	-	99	84.548	Myotis_lucifugus
ENSCANG00000029091	ZC3HC1	100	87.078	ENSNGAG00000019014	Zc3hc1	100	87.078	Nannospalax_galili
ENSCANG00000029091	ZC3HC1	92	45.732	ENSNBRG00000004577	zc3hc1	94	42.828	Neolamprologus_brichardi
ENSCANG00000029091	ZC3HC1	99	97.209	ENSNLEG00000012698	ZC3HC1	99	97.209	Nomascus_leucogenys
ENSCANG00000029091	ZC3HC1	98	79.352	ENSMEUG00000011023	ZC3HC1	98	79.352	Notamacropus_eugenii
ENSCANG00000029091	ZC3HC1	76	81.395	ENSOPRG00000007867	-	68	81.395	Ochotona_princeps
ENSCANG00000029091	ZC3HC1	100	84.661	ENSODEG00000014604	ZC3HC1	100	84.462	Octodon_degus
ENSCANG00000029091	ZC3HC1	93	46.037	ENSONIG00000011644	zc3hc1	94	43.354	Oreochromis_niloticus
ENSCANG00000029091	ZC3HC1	93	72.308	ENSOANG00000011460	ZC3HC1	100	69.397	Ornithorhynchus_anatinus
ENSCANG00000029091	ZC3HC1	100	87.464	ENSOCUG00000017137	ZC3HC1	100	86.139	Oryctolagus_cuniculus
ENSCANG00000029091	ZC3HC1	94	45.970	ENSORLG00000014409	zc3hc1	94	42.137	Oryzias_latipes
ENSCANG00000029091	ZC3HC1	94	46.269	ENSORLG00020015874	zc3hc1	94	42.972	Oryzias_latipes_hni
ENSCANG00000029091	ZC3HC1	94	45.970	ENSORLG00015014641	zc3hc1	94	42.771	Oryzias_latipes_hsok
ENSCANG00000029091	ZC3HC1	95	45.585	ENSOMEG00000020604	zc3hc1	95	44.758	Oryzias_melastigma
ENSCANG00000029091	ZC3HC1	95	45.585	ENSOMEG00000000215	zc3hc1	95	44.758	Oryzias_melastigma
ENSCANG00000029091	ZC3HC1	99	90.732	ENSOGAG00000026193	ZC3HC1	100	86.853	Otolemur_garnettii
ENSCANG00000029091	ZC3HC1	100	91.089	ENSOARG00000004907	ZC3HC1	99	91.089	Ovis_aries
ENSCANG00000029091	ZC3HC1	99	99.034	ENSPPAG00000043172	ZC3HC1	99	99.034	Pan_paniscus
ENSCANG00000029091	ZC3HC1	100	92.059	ENSPPRG00000001004	ZC3HC1	100	90.719	Panthera_pardus
ENSCANG00000029091	ZC3HC1	100	91.235	ENSPTIG00000007823	ZC3HC1	100	91.235	Panthera_tigris_altaica
ENSCANG00000029091	ZC3HC1	99	99.034	ENSPTRG00000019685	ZC3HC1	99	99.034	Pan_troglodytes
ENSCANG00000029091	ZC3HC1	100	99.519	ENSPANG00000014229	ZC3HC1	100	99.519	Papio_anubis
ENSCANG00000029091	ZC3HC1	94	49.686	ENSPKIG00000007172	zc3hc1	95	48.133	Paramormyrops_kingsleyae
ENSCANG00000029091	ZC3HC1	94	66.775	ENSPSIG00000016646	ZC3HC1	100	60.234	Pelodiscus_sinensis
ENSCANG00000029091	ZC3HC1	94	41.627	ENSPMGG00000003548	zc3hc1	94	41.627	Periophthalmus_magnuspinnatus
ENSCANG00000029091	ZC3HC1	100	86.454	ENSPEMG00000000514	Zc3hc1	100	86.454	Peromyscus_maniculatus_bairdii
ENSCANG00000029091	ZC3HC1	99	76.401	ENSPCIG00000020619	ZC3HC1	100	78.663	Phascolarctos_cinereus
ENSCANG00000029091	ZC3HC1	96	42.570	ENSPFOG00000003466	zc3hc1	96	42.000	Poecilia_formosa
ENSCANG00000029091	ZC3HC1	96	42.222	ENSPLAG00000022211	zc3hc1	96	41.851	Poecilia_latipinna
ENSCANG00000029091	ZC3HC1	96	42.424	ENSPMEG00000001458	zc3hc1	96	42.052	Poecilia_mexicana
ENSCANG00000029091	ZC3HC1	96	42.828	ENSPREG00000004004	zc3hc1	96	42.254	Poecilia_reticulata
ENSCANG00000029091	ZC3HC1	98	94.118	ENSPPYG00000017998	ZC3HC1	99	89.662	Pongo_abelii
ENSCANG00000029091	ZC3HC1	98	86.893	ENSPCAG00000001182	ZC3HC1	100	86.522	Procavia_capensis
ENSCANG00000029091	ZC3HC1	100	94.432	ENSPCOG00000017354	ZC3HC1	100	94.432	Propithecus_coquereli
ENSCANG00000029091	ZC3HC1	99	88.780	ENSPVAG00000003195	ZC3HC1	100	85.259	Pteropus_vampyrus
ENSCANG00000029091	ZC3HC1	94	43.149	ENSPNYG00000020692	zc3hc1	94	42.536	Pundamilia_nyererei
ENSCANG00000029091	ZC3HC1	93	45.303	ENSPNAG00000020746	zc3hc1	95	45.094	Pygocentrus_nattereri
ENSCANG00000029091	ZC3HC1	100	85.288	ENSRNOG00000010154	Zc3hc1	100	85.288	Rattus_norvegicus
ENSCANG00000029091	ZC3HC1	100	99.519	ENSRBIG00000029409	ZC3HC1	100	99.558	Rhinopithecus_bieti
ENSCANG00000029091	ZC3HC1	100	99.602	ENSRROG00000041831	ZC3HC1	100	99.602	Rhinopithecus_roxellana
ENSCANG00000029091	ZC3HC1	100	97.596	ENSSBOG00000032787	ZC3HC1	100	97.596	Saimiri_boliviensis_boliviensis
ENSCANG00000029091	ZC3HC1	99	72.195	ENSSHAG00000002529	ZC3HC1	100	78.065	Sarcophilus_harrisii
ENSCANG00000029091	ZC3HC1	95	48.971	ENSSFOG00015003667	zc3hc1	91	48.163	Scleropages_formosus
ENSCANG00000029091	ZC3HC1	95	43.513	ENSSMAG00000000647	zc3hc1	86	43.313	Scophthalmus_maximus
ENSCANG00000029091	ZC3HC1	95	44.603	ENSSDUG00000004241	zc3hc1	93	43.813	Seriola_dumerili
ENSCANG00000029091	ZC3HC1	95	44.603	ENSSLDG00000025056	zc3hc1	93	44.016	Seriola_lalandi_dorsalis
ENSCANG00000029091	ZC3HC1	96	81.500	ENSSARG00000012013	ZC3HC1	99	78.443	Sorex_araneus
ENSCANG00000029091	ZC3HC1	86	56.782	ENSSPUG00000000778	ZC3HC1	86	56.782	Sphenodon_punctatus
ENSCANG00000029091	ZC3HC1	95	45.030	ENSSPAG00000020041	zc3hc1	95	44.444	Stegastes_partitus
ENSCANG00000029091	ZC3HC1	100	90.438	ENSSSCG00000016565	ZC3HC1	100	90.746	Sus_scrofa
ENSCANG00000029091	ZC3HC1	92	63.542	ENSTGUG00000016262	ZC3HC1	100	59.350	Taeniopygia_guttata
ENSCANG00000029091	ZC3HC1	93	48.553	ENSTRUG00000020077	zc3hc1	95	42.710	Takifugu_rubripes
ENSCANG00000029091	ZC3HC1	93	48.000	ENSTNIG00000007585	zc3hc1	99	43.943	Tetraodon_nigroviridis
ENSCANG00000029091	ZC3HC1	98	89.216	ENSTBEG00000005216	ZC3HC1	99	82.635	Tupaia_belangeri
ENSCANG00000029091	ZC3HC1	99	88.293	ENSTTRG00000008458	ZC3HC1	100	90.833	Tursiops_truncatus
ENSCANG00000029091	ZC3HC1	100	91.633	ENSUAMG00000020249	ZC3HC1	100	91.633	Ursus_americanus
ENSCANG00000029091	ZC3HC1	100	91.235	ENSUMAG00000009268	ZC3HC1	100	91.235	Ursus_maritimus
ENSCANG00000029091	ZC3HC1	90	91.837	ENSVPAG00000010846	ZC3HC1	77	91.837	Vicugna_pacos
ENSCANG00000029091	ZC3HC1	96	92.292	ENSVVUG00000012386	ZC3HC1	99	92.292	Vulpes_vulpes
ENSCANG00000029091	ZC3HC1	91	51.502	ENSXETG00000033900	zc3hc1	95	51.502	Xenopus_tropicalis
ENSCANG00000029091	ZC3HC1	96	42.222	ENSXCOG00000013570	zc3hc1	95	43.636	Xiphophorus_couchianus
ENSCANG00000029091	ZC3HC1	88	44.444	ENSXMAG00000010979	zc3hc1	95	43.818	Xiphophorus_maculatus