EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCANG00000029847 (Gene tree)
Gene ID: 105520963
Gene Symbol: SCAF4
Alias: DKFZp434E098|KIAA1172|SFRS15|SRA4
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 61923 bases
Position: chrKN982576.1:318325-380247
Accession: 105520963
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000013112	RRM_1	PF00076.22	3.6e-09	1	1
ENSCANP00000013109	RRM_1	PF00076.22	4.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000036024	SCAF4-202	3396	XM_011954973	ENSCANP00000013112	1131 (aa)	XP_011810363	A0A2K5I9D2
ENSCANT00000036021	SCAF4-201	3441	XM_011954972	ENSCANP00000013109	1146 (aa)	XP_011810362	A0A2K5I902

Gene Model

Click here to download ENSCANG00000029847's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000029847's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000029847	SCAF4	100	98.780	ENSG00000156304	SCAF4	100	98.780	Homo_sapiens
ENSCANG00000029847	SCAF4	79	52.615	ENSAPOG00000002946	scaf4a	55	59.063	Acanthochromis_polyacanthus
ENSCANG00000029847	SCAF4	73	93.494	ENSAMEG00000014987	SCAF4	96	93.494	Ailuropoda_melanoleuca
ENSCANG00000029847	SCAF4	69	57.031	ENSAOCG00000000615	scaf4a	55	58.761	Amphiprion_ocellaris
ENSCANG00000029847	SCAF4	69	57.031	ENSAPEG00000021229	scaf4a	55	58.610	Amphiprion_percula
ENSCANG00000029847	SCAF4	99	75.478	ENSAPLG00000002509	SCAF4	59	83.308	Anas_platyrhynchos
ENSCANG00000029847	SCAF4	96	68.707	ENSACAG00000002569	SCAF4	52	84.146	Anolis_carolinensis
ENSCANG00000029847	SCAF4	100	98.084	ENSANAG00000037494	SCAF4	100	98.084	Aotus_nancymaae
ENSCANG00000029847	SCAF4	93	49.955	ENSAMXG00000008585	scaf4a	60	62.952	Astyanax_mexicanus
ENSCANG00000029847	SCAF4	100	92.509	ENSBTAG00000018855	SCAF4	100	92.073	Bos_taurus
ENSCANG00000029847	SCAF4	100	98.000	ENSCJAG00000008993	SCAF4	100	98.000	Callithrix_jacchus
ENSCANG00000029847	SCAF4	99	93.931	ENSCAFG00000008863	SCAF4	99	93.755	Canis_familiaris
ENSCANG00000029847	SCAF4	99	91.873	ENSCAFG00020026019	SCAF4	100	93.090	Canis_lupus_dingo
ENSCANG00000029847	SCAF4	100	92.188	ENSCHIG00000008385	SCAF4	100	91.667	Capra_hircus
ENSCANG00000029847	SCAF4	91	95.800	ENSTSYG00000011344	SCAF4	99	95.800	Carlito_syrichta
ENSCANG00000029847	SCAF4	100	89.397	ENSCPOG00000012443	SCAF4	100	89.655	Cavia_porcellus
ENSCANG00000029847	SCAF4	100	98.255	ENSCCAG00000033727	SCAF4	100	98.255	Cebus_capucinus
ENSCANG00000029847	SCAF4	100	98.785	ENSCATG00000030379	SCAF4	100	98.785	Cercocebus_atys
ENSCANG00000029847	SCAF4	99	91.233	ENSCLAG00000006298	SCAF4	100	91.840	Chinchilla_lanigera
ENSCANG00000029847	SCAF4	100	98.871	ENSCSAG00000009438	SCAF4	100	98.871	Chlorocebus_sabaeus
ENSCANG00000029847	SCAF4	99	83.416	ENSCGRG00001020821	Scaf4	100	82.836	Cricetulus_griseus_chok1gshd
ENSCANG00000029847	SCAF4	99	83.195	ENSCGRG00000014360	Scaf4	99	86.369	Cricetulus_griseus_crigri
ENSCANG00000029847	SCAF4	79	52.492	ENSCSEG00000019549	scaf4a	53	55.235	Cynoglossus_semilaevis
ENSCANG00000029847	SCAF4	58	55.822	ENSCSEG00000012808	-	62	60.563	Cynoglossus_semilaevis
ENSCANG00000029847	SCAF4	100	90.750	ENSDNOG00000019014	SCAF4	94	90.663	Dasypus_novemcinctus
ENSCANG00000029847	SCAF4	92	97.436	ENSETEG00000000583	SCAF4	94	97.436	Echinops_telfairi
ENSCANG00000029847	SCAF4	100	94.154	ENSEASG00005007756	SCAF4	100	94.154	Equus_asinus_asinus
ENSCANG00000029847	SCAF4	100	94.241	ENSECAG00000014248	SCAF4	100	94.066	Equus_caballus
ENSCANG00000029847	SCAF4	58	52.703	ENSELUG00000002779	SCAF8	61	68.116	Esox_lucius
ENSCANG00000029847	SCAF4	100	93.223	ENSFCAG00000002228	SCAF4	100	94.026	Felis_catus
ENSCANG00000029847	SCAF4	99	89.387	ENSFDAG00000017780	SCAF4	100	89.129	Fukomys_damarensis
ENSCANG00000029847	SCAF4	100	76.603	ENSGALG00000033965	SCAF4	59	83.537	Gallus_gallus
ENSCANG00000029847	SCAF4	91	95.730	ENSGGOG00000015557	SCAF4	100	99.085	Gorilla_gorilla
ENSCANG00000029847	SCAF4	100	91.121	ENSHGLG00000010582	SCAF4	100	91.466	Heterocephalus_glaber_female
ENSCANG00000029847	SCAF4	99	91.012	ENSHGLG00100009441	SCAF4	100	91.361	Heterocephalus_glaber_male
ENSCANG00000029847	SCAF4	69	49.770	ENSIPUG00000011285	scaf4	63	63.008	Ictalurus_punctatus
ENSCANG00000029847	SCAF4	99	87.711	ENSSTOG00000004450	SCAF4	100	88.157	Ictidomys_tridecemlineatus
ENSCANG00000029847	SCAF4	99	89.192	ENSJJAG00000019447	Scaf4	99	89.367	Jaculus_jaculus
ENSCANG00000029847	SCAF4	51	58.268	ENSKMAG00000005742	scaf4b	59	68.878	Kryptolebias_marmoratus
ENSCANG00000029847	SCAF4	98	60.404	ENSLACG00000013913	SCAF4	59	69.592	Latimeria_chalumnae
ENSCANG00000029847	SCAF4	96	57.803	ENSLOCG00000009162	scaf4a	59	67.656	Lepisosteus_oculatus
ENSCANG00000029847	SCAF4	99	92.381	ENSLAFG00000010710	SCAF4	100	92.112	Loxodonta_africana
ENSCANG00000029847	SCAF4	100	98.701	ENSMFAG00000037668	SCAF4	100	98.701	Macaca_fascicularis
ENSCANG00000029847	SCAF4	100	98.615	ENSMMUG00000001712	SCAF4	100	98.615	Macaca_mulatta
ENSCANG00000029847	SCAF4	100	98.529	ENSMNEG00000032966	SCAF4	100	98.529	Macaca_nemestrina
ENSCANG00000029847	SCAF4	99	98.775	ENSMLEG00000039674	SCAF4	100	98.775	Mandrillus_leucophaeus
ENSCANG00000029847	SCAF4	99	76.261	ENSMGAG00000014515	SCAF4	59	83.462	Meleagris_gallopavo
ENSCANG00000029847	SCAF4	99	88.624	ENSMAUG00000013307	Scaf4	100	88.624	Mesocricetus_auratus
ENSCANG00000029847	SCAF4	100	96.946	ENSMICG00000005256	SCAF4	100	96.946	Microcebus_murinus
ENSCANG00000029847	SCAF4	100	86.123	ENSMOCG00000012087	Scaf4	95	91.948	Microtus_ochrogaster
ENSCANG00000029847	SCAF4	100	84.943	ENSMODG00000021040	SCAF4	100	83.899	Monodelphis_domestica
ENSCANG00000029847	SCAF4	100	83.918	MGP_CAROLIEiJ_G0020944	Scaf4	95	90.593	Mus_caroli
ENSCANG00000029847	SCAF4	100	83.702	ENSMUSG00000022983	Scaf4	95	90.285	Mus_musculus
ENSCANG00000029847	SCAF4	100	82.792	MGP_PahariEiJ_G0016649	Scaf4	100	86.667	Mus_pahari
ENSCANG00000029847	SCAF4	100	84.154	MGP_SPRETEiJ_G0021850	Scaf4	100	86.331	Mus_spretus
ENSCANG00000029847	SCAF4	100	92.208	ENSMPUG00000001078	SCAF4	100	92.468	Mustela_putorius_furo
ENSCANG00000029847	SCAF4	99	77.870	ENSMLUG00000011472	SCAF4	79	83.532	Myotis_lucifugus
ENSCANG00000029847	SCAF4	99	91.220	ENSNGAG00000005214	Scaf4	99	91.068	Nannospalax_galili
ENSCANG00000029847	SCAF4	100	98.779	ENSNLEG00000003569	SCAF4	100	98.779	Nomascus_leucogenys
ENSCANG00000029847	SCAF4	78	90.761	ENSOPRG00000007016	SCAF4	77	90.217	Ochotona_princeps
ENSCANG00000029847	SCAF4	100	89.307	ENSODEG00000002718	SCAF4	100	88.879	Octodon_degus
ENSCANG00000029847	SCAF4	71	58.673	ENSONIG00000004687	scaf4a	51	73.780	Oreochromis_niloticus
ENSCANG00000029847	SCAF4	100	88.927	ENSOCUG00000008336	SCAF4	100	89.187	Oryctolagus_cuniculus
ENSCANG00000029847	SCAF4	52	57.480	ENSORLG00000003420	scaf4b	67	58.650	Oryzias_latipes
ENSCANG00000029847	SCAF4	99	95.581	ENSOGAG00000014653	SCAF4	94	95.455	Otolemur_garnettii
ENSCANG00000029847	SCAF4	99	91.594	ENSOARG00000013894	SCAF4	99	90.783	Ovis_aries
ENSCANG00000029847	SCAF4	100	98.780	ENSPPAG00000028535	SCAF4	100	98.780	Pan_paniscus
ENSCANG00000029847	SCAF4	99	94.051	ENSPPRG00000000635	SCAF4	100	94.051	Panthera_pardus
ENSCANG00000029847	SCAF4	99	91.197	ENSPTIG00000021578	SCAF4	99	89.035	Panthera_tigris_altaica
ENSCANG00000029847	SCAF4	100	98.780	ENSPTRG00000013848	SCAF4	100	98.780	Pan_troglodytes
ENSCANG00000029847	SCAF4	100	98.701	ENSPANG00000017332	SCAF4	100	98.701	Papio_anubis
ENSCANG00000029847	SCAF4	64	64.380	ENSPKIG00000022408	scaf4a	91	66.320	Paramormyrops_kingsleyae
ENSCANG00000029847	SCAF4	99	76.950	ENSPSIG00000014242	SCAF4	57	84.211	Pelodiscus_sinensis
ENSCANG00000029847	SCAF4	61	87.374	ENSPCIG00000028183	SCAF4	91	82.042	Phascolarctos_cinereus
ENSCANG00000029847	SCAF4	100	98.955	ENSPPYG00000011355	SCAF4	100	98.955	Pongo_abelii
ENSCANG00000029847	SCAF4	100	95.830	ENSPCOG00000018710	SCAF4	100	95.917	Propithecus_coquereli
ENSCANG00000029847	SCAF4	100	93.106	ENSPVAG00000005220	SCAF4	100	92.757	Pteropus_vampyrus
ENSCANG00000029847	SCAF4	76	57.480	ENSPNAG00000016892	scaf4a	60	63.623	Pygocentrus_nattereri
ENSCANG00000029847	SCAF4	98	86.400	ENSRNOG00000002104	Scaf4	95	86.667	Rattus_norvegicus
ENSCANG00000029847	SCAF4	99	96.491	ENSRBIG00000040007	SCAF4	99	96.491	Rhinopithecus_bieti
ENSCANG00000029847	SCAF4	100	99.476	ENSRROG00000029488	SCAF4	100	99.476	Rhinopithecus_roxellana
ENSCANG00000029847	SCAF4	100	84.481	ENSSHAG00000001581	SCAF4	100	83.173	Sarcophilus_harrisii
ENSCANG00000029847	SCAF4	89	47.092	ENSSFOG00015006338	scaf4a	54	58.041	Scleropages_formosus
ENSCANG00000029847	SCAF4	80	53.454	ENSSMAG00000017901	scaf4a	53	53.666	Scophthalmus_maximus
ENSCANG00000029847	SCAF4	66	58.065	ENSSMAG00000003738	scaf4b	54	71.519	Scophthalmus_maximus
ENSCANG00000029847	SCAF4	57	61.290	ENSSDUG00000012380	scaf4b	55	69.753	Seriola_dumerili
ENSCANG00000029847	SCAF4	57	61.290	ENSSLDG00000023152	-	55	69.753	Seriola_lalandi_dorsalis
ENSCANG00000029847	SCAF4	100	89.177	ENSSARG00000009994	SCAF4	100	88.918	Sorex_araneus
ENSCANG00000029847	SCAF4	100	90.595	ENSSSCG00000021023	SCAF4	100	90.854	Sus_scrofa
ENSCANG00000029847	SCAF4	74	72.354	ENSTGUG00000013464	SCAF4	57	85.714	Taeniopygia_guttata
ENSCANG00000029847	SCAF4	51	58.099	ENSTRUG00000009536	-	65	57.818	Takifugu_rubripes
ENSCANG00000029847	SCAF4	99	92.606	ENSTTRG00000010963	SCAF4	100	92.254	Tursiops_truncatus
ENSCANG00000029847	SCAF4	100	91.623	ENSUAMG00000008860	SCAF4	100	91.361	Ursus_americanus
ENSCANG00000029847	SCAF4	99	91.166	ENSUMAG00000016962	SCAF4	100	91.784	Ursus_maritimus
ENSCANG00000029847	SCAF4	99	93.993	ENSVVUG00000002953	SCAF4	100	93.816	Vulpes_vulpes
ENSCANG00000029847	SCAF4	99	55.676	ENSXETG00000007351	scaf4	63	66.476	Xenopus_tropicalis