EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCANG00000030017 (Gene tree)
Gene ID: 105526613
Gene Symbol: SNRNP48
Alias: C6orf151|FLJ32234|dJ336K20B.1|dJ512B11.2
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 19262 bases
Position: chrKN984781.1:8147950-8167211
Accession: 105526613
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000013177	zf-U11-48K	PF05253.12	1.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000036090	SNRNP48-201	1172	XM_011962654	ENSCANP00000013177	339 (aa)	XP_011818044	A0A2K5I9J9

Gene Model

Click here to download ENSCANG00000030017's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000030017's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000030017	SNRNP48	100	98.820	ENSG00000168566	SNRNP48	100	98.820	Homo_sapiens
ENSCANG00000030017	SNRNP48	81	47.703	ENSAPOG00000021430	snrnp48	83	47.423	Acanthochromis_polyacanthus
ENSCANG00000030017	SNRNP48	99	89.337	ENSAMEG00000017349	SNRNP48	100	88.184	Ailuropoda_melanoleuca
ENSCANG00000030017	SNRNP48	83	46.290	ENSACIG00000002032	snrnp48	82	46.290	Amphilophus_citrinellus
ENSCANG00000030017	SNRNP48	81	47.703	ENSAOCG00000010562	snrnp48	96	42.693	Amphiprion_ocellaris
ENSCANG00000030017	SNRNP48	81	48.043	ENSAPEG00000003231	snrnp48	96	42.899	Amphiprion_percula
ENSCANG00000030017	SNRNP48	77	49.632	ENSATEG00000020210	snrnp48	81	49.286	Anabas_testudineus
ENSCANG00000030017	SNRNP48	83	64.726	ENSACAG00000002811	SNRNP48	89	64.483	Anolis_carolinensis
ENSCANG00000030017	SNRNP48	100	98.820	ENSANAG00000033538	SNRNP48	100	98.820	Aotus_nancymaae
ENSCANG00000030017	SNRNP48	94	45.062	ENSAMXG00000015309	snrnp48	85	47.387	Astyanax_mexicanus
ENSCANG00000030017	SNRNP48	100	86.176	ENSBTAG00000001123	SNRNP48	100	86.471	Bos_taurus
ENSCANG00000030017	SNRNP48	100	97.640	ENSCJAG00000021330	SNRNP48	100	97.640	Callithrix_jacchus
ENSCANG00000030017	SNRNP48	99	91.667	ENSCAFG00000009574	SNRNP48	83	91.691	Canis_familiaris
ENSCANG00000030017	SNRNP48	99	91.988	ENSCAFG00020013203	SNRNP48	99	91.988	Canis_lupus_dingo
ENSCANG00000030017	SNRNP48	100	87.647	ENSCHIG00000015216	SNRNP48	100	87.941	Capra_hircus
ENSCANG00000030017	SNRNP48	100	93.215	ENSTSYG00000000698	SNRNP48	100	93.215	Carlito_syrichta
ENSCANG00000030017	SNRNP48	91	87.662	ENSCAPG00000006768	SNRNP48	100	87.338	Cavia_aperea
ENSCANG00000030017	SNRNP48	100	90.855	ENSCPOG00000007910	SNRNP48	100	90.855	Cavia_porcellus
ENSCANG00000030017	SNRNP48	100	96.755	ENSCCAG00000035652	SNRNP48	100	96.755	Cebus_capucinus
ENSCANG00000030017	SNRNP48	100	98.820	ENSCATG00000033947	SNRNP48	100	98.820	Cercocebus_atys
ENSCANG00000030017	SNRNP48	100	90.560	ENSCLAG00000003765	SNRNP48	100	90.560	Chinchilla_lanigera
ENSCANG00000030017	SNRNP48	100	99.410	ENSCSAG00000007409	SNRNP48	100	99.410	Chlorocebus_sabaeus
ENSCANG00000030017	SNRNP48	85	63.158	ENSCPBG00000019146	SNRNP48	90	63.973	Chrysemys_picta_bellii
ENSCANG00000030017	SNRNP48	94	30.031	ENSCING00000004121	-	61	34.975	Ciona_intestinalis
ENSCANG00000030017	SNRNP48	100	88.496	ENSCGRG00001001076	-	100	87.611	Cricetulus_griseus_chok1gshd
ENSCANG00000030017	SNRNP48	99	69.552	ENSCGRG00001008805	-	95	68.955	Cricetulus_griseus_chok1gshd
ENSCANG00000030017	SNRNP48	100	88.496	ENSCGRG00000007781	Snrnp48	100	87.611	Cricetulus_griseus_crigri
ENSCANG00000030017	SNRNP48	77	49.430	ENSCSEG00000000722	snrnp48	72	49.808	Cynoglossus_semilaevis
ENSCANG00000030017	SNRNP48	89	46.326	ENSCVAG00000019829	snrnp48	73	47.222	Cyprinodon_variegatus
ENSCANG00000030017	SNRNP48	81	46.853	ENSDARG00000039989	snrnp48	83	45.548	Danio_rerio
ENSCANG00000030017	SNRNP48	100	90.882	ENSDNOG00000014978	SNRNP48	100	90.882	Dasypus_novemcinctus
ENSCANG00000030017	SNRNP48	99	89.381	ENSDORG00000015140	Snrnp48	100	88.529	Dipodomys_ordii
ENSCANG00000030017	SNRNP48	99	92.604	ENSEASG00005012021	SNRNP48	100	92.330	Equus_asinus_asinus
ENSCANG00000030017	SNRNP48	100	93.215	ENSECAG00000026937	SNRNP48	100	93.215	Equus_caballus
ENSCANG00000030017	SNRNP48	100	71.176	ENSEEUG00000015437	SNRNP48	99	70.882	Erinaceus_europaeus
ENSCANG00000030017	SNRNP48	87	47.020	ENSELUG00000009766	snrnp48	77	48.214	Esox_lucius
ENSCANG00000030017	SNRNP48	100	93.510	ENSFCAG00000018853	SNRNP48	100	93.510	Felis_catus
ENSCANG00000030017	SNRNP48	83	66.438	ENSFALG00000007797	SNRNP48	92	65.979	Ficedula_albicollis
ENSCANG00000030017	SNRNP48	99	90.533	ENSFDAG00000009231	SNRNP48	100	90.265	Fukomys_damarensis
ENSCANG00000030017	SNRNP48	59	56.931	ENSFHEG00000014647	snrnp48	97	46.465	Fundulus_heteroclitus
ENSCANG00000030017	SNRNP48	73	47.581	ENSGMOG00000018599	-	86	45.583	Gadus_morhua
ENSCANG00000030017	SNRNP48	78	66.787	ENSGALG00000013005	SNRNP48	82	68.163	Gallus_gallus
ENSCANG00000030017	SNRNP48	73	51.172	ENSGAFG00000021639	snrnp48	81	44.109	Gambusia_affinis
ENSCANG00000030017	SNRNP48	71	51.653	ENSGACG00000017756	-	84	48.432	Gasterosteus_aculeatus
ENSCANG00000030017	SNRNP48	84	62.252	ENSGAGG00000000865	SNRNP48	96	62.963	Gopherus_agassizii
ENSCANG00000030017	SNRNP48	100	98.820	ENSGGOG00000013220	SNRNP48	100	98.820	Gorilla_gorilla
ENSCANG00000030017	SNRNP48	76	47.893	ENSHBUG00000017066	snrnp48	83	45.918	Haplochromis_burtoni
ENSCANG00000030017	SNRNP48	99	91.716	ENSHGLG00000015241	SNRNP48	100	91.445	Heterocephalus_glaber_female
ENSCANG00000030017	SNRNP48	99	91.716	ENSHGLG00100010027	SNRNP48	100	91.445	Heterocephalus_glaber_male
ENSCANG00000030017	SNRNP48	72	47.967	ENSHCOG00000014066	snrnp48	81	45.833	Hippocampus_comes
ENSCANG00000030017	SNRNP48	100	94.395	ENSSTOG00000014635	SNRNP48	100	97.000	Ictidomys_tridecemlineatus
ENSCANG00000030017	SNRNP48	100	85.251	ENSJJAG00000011495	Snrnp48	100	85.251	Jaculus_jaculus
ENSCANG00000030017	SNRNP48	90	44.625	ENSKMAG00000016514	snrnp48	80	46.975	Kryptolebias_marmoratus
ENSCANG00000030017	SNRNP48	76	49.421	ENSLBEG00000026249	snrnp48	95	43.314	Labrus_bergylta
ENSCANG00000030017	SNRNP48	96	54.192	ENSLACG00000003958	SNRNP48	98	52.770	Latimeria_chalumnae
ENSCANG00000030017	SNRNP48	83	51.211	ENSLOCG00000004187	snrnp48	95	48.665	Lepisosteus_oculatus
ENSCANG00000030017	SNRNP48	100	89.086	ENSLAFG00000011152	SNRNP48	100	89.086	Loxodonta_africana
ENSCANG00000030017	SNRNP48	100	99.705	ENSMFAG00000045216	SNRNP48	100	99.705	Macaca_fascicularis
ENSCANG00000030017	SNRNP48	100	99.705	ENSMMUG00000014785	SNRNP48	100	99.705	Macaca_mulatta
ENSCANG00000030017	SNRNP48	100	99.410	ENSMNEG00000042269	SNRNP48	100	99.410	Macaca_nemestrina
ENSCANG00000030017	SNRNP48	100	99.705	ENSMLEG00000034004	SNRNP48	100	99.705	Mandrillus_leucophaeus
ENSCANG00000030017	SNRNP48	76	48.077	ENSMAMG00000018673	snrnp48	71	48.029	Mastacembelus_armatus
ENSCANG00000030017	SNRNP48	83	65.646	ENSMGAG00000006037	SNRNP48	99	65.411	Meleagris_gallopavo
ENSCANG00000030017	SNRNP48	100	89.086	ENSMAUG00000011944	Snrnp48	100	88.201	Mesocricetus_auratus
ENSCANG00000030017	SNRNP48	100	92.330	ENSMICG00000012497	SNRNP48	100	92.330	Microcebus_murinus
ENSCANG00000030017	SNRNP48	100	88.791	ENSMOCG00000015555	Snrnp48	100	87.906	Microtus_ochrogaster
ENSCANG00000030017	SNRNP48	54	52.973	ENSMMOG00000003072	-	58	52.973	Mola_mola
ENSCANG00000030017	SNRNP48	98	70.349	ENSMODG00000009996	SNRNP48	93	70.349	Monodelphis_domestica
ENSCANG00000030017	SNRNP48	74	50.000	ENSMALG00000005725	snrnp48	80	46.975	Monopterus_albus
ENSCANG00000030017	SNRNP48	100	87.611	MGP_CAROLIEiJ_G0018441	Snrnp48	100	86.726	Mus_caroli
ENSCANG00000030017	SNRNP48	100	86.726	ENSMUSG00000021431	Snrnp48	100	85.841	Mus_musculus
ENSCANG00000030017	SNRNP48	100	87.021	MGP_PahariEiJ_G0019509	Snrnp48	100	86.136	Mus_pahari
ENSCANG00000030017	SNRNP48	100	86.136	MGP_SPRETEiJ_G0019321	Snrnp48	100	85.251	Mus_spretus
ENSCANG00000030017	SNRNP48	99	87.574	ENSNGAG00000004849	Snrnp48	99	87.574	Nannospalax_galili
ENSCANG00000030017	SNRNP48	76	47.510	ENSNBRG00000012127	snrnp48	84	45.578	Neolamprologus_brichardi
ENSCANG00000030017	SNRNP48	100	99.115	ENSNLEG00000011667	SNRNP48	100	99.115	Nomascus_leucogenys
ENSCANG00000030017	SNRNP48	95	78.019	ENSOPRG00000015471	SNRNP48	100	78.019	Ochotona_princeps
ENSCANG00000030017	SNRNP48	74	48.047	ENSONIG00000001520	snrnp48	82	46.021	Oreochromis_niloticus
ENSCANG00000030017	SNRNP48	57	63.462	ENSOANG00000019888	-	100	64.423	Ornithorhynchus_anatinus
ENSCANG00000030017	SNRNP48	84	90.909	ENSOCUG00000005168	SNRNP48	100	90.461	Oryctolagus_cuniculus
ENSCANG00000030017	SNRNP48	88	47.078	ENSORLG00000015654	snrnp48	82	47.586	Oryzias_latipes
ENSCANG00000030017	SNRNP48	88	45.779	ENSORLG00020015976	snrnp48	70	46.897	Oryzias_latipes_hni
ENSCANG00000030017	SNRNP48	88	47.078	ENSORLG00015022379	snrnp48	71	47.931	Oryzias_latipes_hsok
ENSCANG00000030017	SNRNP48	83	47.569	ENSOMEG00000022007	snrnp48	82	48.264	Oryzias_melastigma
ENSCANG00000030017	SNRNP48	92	92.283	ENSOGAG00000005275	SNRNP48	96	92.429	Otolemur_garnettii
ENSCANG00000030017	SNRNP48	85	87.456	ENSOARG00000017319	SNRNP48	99	87.633	Ovis_aries
ENSCANG00000030017	SNRNP48	100	99.115	ENSPPAG00000032873	SNRNP48	100	99.115	Pan_paniscus
ENSCANG00000030017	SNRNP48	100	93.805	ENSPPRG00000004283	SNRNP48	100	93.805	Panthera_pardus
ENSCANG00000030017	SNRNP48	85	94.077	ENSPTIG00000013502	SNRNP48	99	94.346	Panthera_tigris_altaica
ENSCANG00000030017	SNRNP48	100	99.115	ENSPTRG00000017703	SNRNP48	100	99.115	Pan_troglodytes
ENSCANG00000030017	SNRNP48	100	99.705	ENSPANG00000000771	SNRNP48	100	99.705	Papio_anubis
ENSCANG00000030017	SNRNP48	94	46.087	ENSPKIG00000013703	snrnp48	70	44.940	Paramormyrops_kingsleyae
ENSCANG00000030017	SNRNP48	87	61.290	ENSPSIG00000002213	SNRNP48	92	61.775	Pelodiscus_sinensis
ENSCANG00000030017	SNRNP48	72	48.980	ENSPMGG00000008120	snrnp48	86	48.980	Periophthalmus_magnuspinnatus
ENSCANG00000030017	SNRNP48	100	89.086	ENSPEMG00000008872	Snrnp48	100	89.691	Peromyscus_maniculatus_bairdii
ENSCANG00000030017	SNRNP48	73	52.590	ENSPFOG00000003578	snrnp48	81	45.399	Poecilia_formosa
ENSCANG00000030017	SNRNP48	67	52.402	ENSPLAG00000002290	snrnp48	77	51.965	Poecilia_latipinna
ENSCANG00000030017	SNRNP48	73	51.793	ENSPMEG00000018033	snrnp48	81	44.785	Poecilia_mexicana
ENSCANG00000030017	SNRNP48	72	52.439	ENSPREG00000018541	snrnp48	80	49.291	Poecilia_reticulata
ENSCANG00000030017	SNRNP48	100	97.640	ENSPPYG00000016209	SNRNP48	100	97.640	Pongo_abelii
ENSCANG00000030017	SNRNP48	79	70.787	ENSPCAG00000011991	SNRNP48	99	70.787	Procavia_capensis
ENSCANG00000030017	SNRNP48	100	91.150	ENSPVAG00000002854	SNRNP48	100	91.150	Pteropus_vampyrus
ENSCANG00000030017	SNRNP48	76	48.276	ENSPNYG00000015399	snrnp48	92	46.259	Pundamilia_nyererei
ENSCANG00000030017	SNRNP48	100	87.906	ENSRNOG00000013756	Snrnp48	100	87.021	Rattus_norvegicus
ENSCANG00000030017	SNRNP48	91	99.032	ENSRBIG00000043856	SNRNP48	98	99.032	Rhinopithecus_bieti
ENSCANG00000030017	SNRNP48	100	99.410	ENSRROG00000043229	SNRNP48	100	99.410	Rhinopithecus_roxellana
ENSCANG00000030017	SNRNP48	100	98.230	ENSSBOG00000019486	SNRNP48	100	98.230	Saimiri_boliviensis_boliviensis
ENSCANG00000030017	SNRNP48	98	71.221	ENSSHAG00000014483	SNRNP48	99	71.221	Sarcophilus_harrisii
ENSCANG00000030017	SNRNP48	73	51.779	ENSSFOG00015006610	snrnp48	69	49.662	Scleropages_formosus
ENSCANG00000030017	SNRNP48	87	46.801	ENSSDUG00000014953	snrnp48	96	42.571	Seriola_dumerili
ENSCANG00000030017	SNRNP48	83	48.136	ENSSLDG00000005989	snrnp48	97	42.373	Seriola_lalandi_dorsalis
ENSCANG00000030017	SNRNP48	84	64.430	ENSSPUG00000006257	SNRNP48	84	64.846	Sphenodon_punctatus
ENSCANG00000030017	SNRNP48	78	48.905	ENSSPAG00000006454	snrnp48	80	48.214	Stegastes_partitus
ENSCANG00000030017	SNRNP48	83	64.605	ENSTGUG00000007575	SNRNP48	92	64.583	Taeniopygia_guttata
ENSCANG00000030017	SNRNP48	92	42.722	ENSTRUG00000007031	snrnp48	93	43.963	Takifugu_rubripes
ENSCANG00000030017	SNRNP48	76	45.769	ENSTNIG00000012977	-	72	47.131	Tetraodon_nigroviridis
ENSCANG00000030017	SNRNP48	100	74.336	ENSTBEG00000015620	SNRNP48	100	74.336	Tupaia_belangeri
ENSCANG00000030017	SNRNP48	100	90.265	ENSTTRG00000016715	SNRNP48	100	90.265	Tursiops_truncatus
ENSCANG00000030017	SNRNP48	100	92.330	ENSUAMG00000003690	SNRNP48	100	91.150	Ursus_americanus
ENSCANG00000030017	SNRNP48	85	87.108	ENSVPAG00000003557	SNRNP48	99	86.926	Vicugna_pacos
ENSCANG00000030017	SNRNP48	99	91.691	ENSVVUG00000004996	SNRNP48	99	91.691	Vulpes_vulpes
ENSCANG00000030017	SNRNP48	89	52.229	ENSXETG00000020447	snrnp48	99	48.870	Xenopus_tropicalis
ENSCANG00000030017	SNRNP48	67	51.739	ENSXCOG00000004478	snrnp48	69	51.489	Xiphophorus_couchianus
ENSCANG00000030017	SNRNP48	82	50.179	ENSXMAG00000013595	snrnp48	81	45.317	Xiphophorus_maculatus