EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000030105 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein 38 pseudogene
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Minus strand
Length: 785 bases
Position: chrKN984364.1:6692955-6693739
Accession: 105525850
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000013365	RRM_1	PF00076.22	4.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000036279	-	687	-	ENSCANP00000013365	228 (aa)	-	A0A2K5I9P9

Gene Model

Click here to download ENSCANG00000030105's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000030105's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000030105	-	53	56.954	ENSCANG00000030245	RBM24	94	51.695

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000030105	-	89	76.891	ENSG00000132819	RBM38	99	81.667	Homo_sapiens
ENSCANG00000030105	-	80	52.752	ENSAPOG00000009939	-	95	54.128	Acanthochromis_polyacanthus
ENSCANG00000030105	-	80	46.383	ENSAPOG00000003301	rbm38	94	46.383	Acanthochromis_polyacanthus
ENSCANG00000030105	-	80	46.352	ENSACIG00000000010	rbm38	93	46.352	Amphilophus_citrinellus
ENSCANG00000030105	-	80	51.351	ENSACIG00000012502	-	96	66.964	Amphilophus_citrinellus
ENSCANG00000030105	-	89	50.840	ENSAOCG00000012559	RBM38	98	52.521	Amphiprion_ocellaris
ENSCANG00000030105	-	80	46.383	ENSAOCG00000013497	-	94	46.383	Amphiprion_ocellaris
ENSCANG00000030105	-	80	47.660	ENSAPEG00000023581	-	95	51.271	Amphiprion_percula
ENSCANG00000030105	-	89	47.917	ENSAPEG00000013137	rbm38	99	47.917	Amphiprion_percula
ENSCANG00000030105	-	80	48.649	ENSATEG00000016366	rbm38	95	48.649	Anabas_testudineus
ENSCANG00000030105	-	81	48.954	ENSATEG00000016710	-	95	51.271	Anabas_testudineus
ENSCANG00000030105	-	79	57.078	ENSACAG00000016238	RBM38	90	57.078	Anolis_carolinensis
ENSCANG00000030105	-	79	73.611	ENSANAG00000031959	RBM38	99	80.833	Aotus_nancymaae
ENSCANG00000030105	-	80	50.000	ENSACLG00000019514	-	95	51.271	Astatotilapia_calliptera
ENSCANG00000030105	-	79	50.661	ENSAMXG00000015601	-	94	50.885	Astyanax_mexicanus
ENSCANG00000030105	-	72	47.938	ENSAMXG00000038120	rbm38	81	47.938	Astyanax_mexicanus
ENSCANG00000030105	-	89	73.950	ENSBTAG00000008105	RBM38	99	73.950	Bos_taurus
ENSCANG00000030105	-	73	45.263	WBGene00006321	sup-12	57	69.767	Caenorhabditis_elegans
ENSCANG00000030105	-	89	75.630	ENSCJAG00000019139	RBM38	99	80.833	Callithrix_jacchus
ENSCANG00000030105	-	89	72.689	ENSCAFG00020021943	RBM38	99	72.689	Canis_lupus_dingo
ENSCANG00000030105	-	89	73.109	ENSCHIG00000002609	RBM38	99	73.109	Capra_hircus
ENSCANG00000030105	-	89	73.950	ENSCPOG00000012781	RBM38	99	73.950	Cavia_porcellus
ENSCANG00000030105	-	89	75.630	ENSCCAG00000036872	RBM38	99	80.833	Cebus_capucinus
ENSCANG00000030105	-	89	77.119	ENSCATG00000032133	RBM38	99	80.833	Cercocebus_atys
ENSCANG00000030105	-	86	72.609	ENSCLAG00000005906	RBM38	100	72.609	Chinchilla_lanigera
ENSCANG00000030105	-	89	77.119	ENSCSAG00000015503	RBM38	99	77.119	Chlorocebus_sabaeus
ENSCANG00000030105	-	79	61.927	ENSCPBG00000024059	RBM38	100	61.927	Chrysemys_picta_bellii
ENSCANG00000030105	-	89	70.168	ENSCGRG00001012928	Rbm38	99	70.168	Cricetulus_griseus_chok1gshd
ENSCANG00000030105	-	78	53.488	ENSCSEG00000004701	-	93	55.349	Cynoglossus_semilaevis
ENSCANG00000030105	-	65	48.066	ENSCSEG00000020943	rbm38	60	48.066	Cynoglossus_semilaevis
ENSCANG00000030105	-	64	56.425	ENSCVAG00000005472	-	92	50.218	Cyprinodon_variegatus
ENSCANG00000030105	-	77	46.087	ENSCVAG00000015952	rbm38	91	45.415	Cyprinodon_variegatus
ENSCANG00000030105	-	77	48.636	ENSDARG00000058818	rbm38	92	48.636	Danio_rerio
ENSCANG00000030105	-	79	69.159	ENSDNOG00000032004	RBM38	100	69.159	Dasypus_novemcinctus
ENSCANG00000030105	-	89	73.529	ENSECAG00000007700	RBM38	99	73.529	Equus_caballus
ENSCANG00000030105	-	89	70.293	ENSEEUG00000013489	RBM38	99	71.548	Erinaceus_europaeus
ENSCANG00000030105	-	70	50.265	ENSELUG00000000585	-	84	50.265	Esox_lucius
ENSCANG00000030105	-	80	51.915	ENSELUG00000005849	-	95	51.915	Esox_lucius
ENSCANG00000030105	-	89	72.269	ENSFCAG00000042916	RBM38	99	79.167	Felis_catus
ENSCANG00000030105	-	64	64.045	ENSFALG00000010805	RBM38	99	61.979	Ficedula_albicollis
ENSCANG00000030105	-	78	55.450	ENSFHEG00000006160	-	92	55.450	Fundulus_heteroclitus
ENSCANG00000030105	-	78	45.690	ENSFHEG00000017748	rbm38	91	45.690	Fundulus_heteroclitus
ENSCANG00000030105	-	64	55.249	ENSGMOG00000016655	-	96	55.801	Gadus_morhua
ENSCANG00000030105	-	79	61.009	ENSGALG00000026081	RBM38	100	61.468	Gallus_gallus
ENSCANG00000030105	-	79	50.685	ENSGACG00000009873	-	100	51.598	Gasterosteus_aculeatus
ENSCANG00000030105	-	78	49.515	ENSGACG00000015224	rbm38	98	49.515	Gasterosteus_aculeatus
ENSCANG00000030105	-	79	62.385	ENSGAGG00000001187	RBM38	100	62.385	Gopherus_agassizii
ENSCANG00000030105	-	80	51.802	ENSHBUG00000011778	-	95	53.153	Haplochromis_burtoni
ENSCANG00000030105	-	86	45.607	ENSHBUG00000012058	rbm38	97	45.607	Haplochromis_burtoni
ENSCANG00000030105	-	89	71.008	ENSHGLG00000015077	RBM38	99	71.008	Heterocephalus_glaber_female
ENSCANG00000030105	-	70	45.699	ENSHCOG00000019040	rbm38	75	45.699	Hippocampus_comes
ENSCANG00000030105	-	66	55.495	ENSHCOG00000005622	-	52	56.593	Hippocampus_comes
ENSCANG00000030105	-	79	50.442	ENSIPUG00000019349	-	94	50.442	Ictalurus_punctatus
ENSCANG00000030105	-	77	44.053	ENSKMAG00000012402	rbm38	98	44.493	Kryptolebias_marmoratus
ENSCANG00000030105	-	80	46.610	ENSLBEG00000018878	rbm38	94	46.610	Labrus_bergylta
ENSCANG00000030105	-	80	51.802	ENSLBEG00000016163	RBM38	97	52.804	Labrus_bergylta
ENSCANG00000030105	-	79	55.204	ENSLOCG00000003456	rbm38	92	55.556	Lepisosteus_oculatus
ENSCANG00000030105	-	88	76.824	ENSMFAG00000043808	RBM38	97	80.342	Macaca_fascicularis
ENSCANG00000030105	-	89	77.119	ENSMMUG00000031391	RBM38	99	80.833	Macaca_mulatta
ENSCANG00000030105	-	89	77.119	ENSMNEG00000034683	RBM38	99	80.833	Macaca_nemestrina
ENSCANG00000030105	-	80	45.339	ENSMAMG00000024135	rbm38	94	45.339	Mastacembelus_armatus
ENSCANG00000030105	-	80	48.718	ENSMAMG00000020499	RBM38	95	51.282	Mastacembelus_armatus
ENSCANG00000030105	-	80	45.148	ENSMZEG00005026036	rbm38	94	45.148	Maylandia_zebra
ENSCANG00000030105	-	80	51.802	ENSMZEG00005000849	-	95	53.153	Maylandia_zebra
ENSCANG00000030105	-	89	71.008	ENSMAUG00000021211	Rbm38	99	71.008	Mesocricetus_auratus
ENSCANG00000030105	-	79	72.685	ENSMICG00000038011	RBM38	100	72.685	Microcebus_murinus
ENSCANG00000030105	-	89	70.168	ENSMOCG00000008715	Rbm38	99	70.168	Microtus_ochrogaster
ENSCANG00000030105	-	88	51.899	ENSMMOG00000020051	-	99	53.165	Mola_mola
ENSCANG00000030105	-	89	61.250	ENSMODG00000016458	RBM38	99	61.250	Monodelphis_domestica
ENSCANG00000030105	-	64	55.866	ENSMALG00000004680	RBM38	67	56.425	Monopterus_albus
ENSCANG00000030105	-	80	45.413	ENSMALG00000022327	rbm38	93	45.413	Monopterus_albus
ENSCANG00000030105	-	89	71.849	MGP_CAROLIEiJ_G0024745	Rbm38	99	71.849	Mus_caroli
ENSCANG00000030105	-	89	71.849	ENSMUSG00000027510	Rbm38	99	71.849	Mus_musculus
ENSCANG00000030105	-	89	71.429	MGP_PahariEiJ_G0026186	Rbm38	99	71.429	Mus_pahari
ENSCANG00000030105	-	89	71.429	MGP_SPRETEiJ_G0025665	Rbm38	99	71.429	Mus_spretus
ENSCANG00000030105	-	67	71.351	ENSMPUG00000006518	RBM38	95	70.681	Mustela_putorius_furo
ENSCANG00000030105	-	79	68.519	ENSMLUG00000011140	RBM38	100	68.519	Myotis_lucifugus
ENSCANG00000030105	-	80	49.362	ENSNBRG00000022545	-	95	50.638	Neolamprologus_brichardi
ENSCANG00000030105	-	86	46.218	ENSNBRG00000022685	rbm38	97	46.218	Neolamprologus_brichardi
ENSCANG00000030105	-	53	60.902	ENSMEUG00000005475	-	98	56.934	Notamacropus_eugenii
ENSCANG00000030105	-	89	74.790	ENSODEG00000007980	RBM38	99	74.790	Octodon_degus
ENSCANG00000030105	-	79	45.763	ENSONIG00000017073	rbm38	95	45.763	Oreochromis_niloticus
ENSCANG00000030105	-	79	49.573	ENSONIG00000020324	-	95	50.855	Oreochromis_niloticus
ENSCANG00000030105	-	80	60.829	ENSOANG00000009259	RBM38	90	58.723	Ornithorhynchus_anatinus
ENSCANG00000030105	-	80	43.038	ENSORLG00000012154	rbm38	80	46.000	Oryzias_latipes
ENSCANG00000030105	-	80	46.414	ENSORLG00000027180	-	95	50.211	Oryzias_latipes
ENSCANG00000030105	-	73	46.000	ENSORLG00020017871	rbm38	80	46.000	Oryzias_latipes_hni
ENSCANG00000030105	-	80	46.414	ENSORLG00020020751	-	95	50.211	Oryzias_latipes_hni
ENSCANG00000030105	-	86	46.053	ENSORLG00015012606	rbm38	97	46.053	Oryzias_latipes_hsok
ENSCANG00000030105	-	80	46.186	ENSORLG00015017040	-	95	50.424	Oryzias_latipes_hsok
ENSCANG00000030105	-	73	46.500	ENSOMEG00000006805	rbm38	80	46.500	Oryzias_melastigma
ENSCANG00000030105	-	80	45.957	ENSOMEG00000023912	-	95	49.362	Oryzias_melastigma
ENSCANG00000030105	-	89	75.314	ENSOGAG00000029136	RBM38	99	75.314	Otolemur_garnettii
ENSCANG00000030105	-	89	72.269	ENSPPRG00000009507	RBM38	99	79.167	Panthera_pardus
ENSCANG00000030105	-	71	74.227	ENSPTRG00000013661	RBM38	99	81.667	Pan_troglodytes
ENSCANG00000030105	-	89	76.995	ENSPANG00000033127	-	100	76.995	Papio_anubis
ENSCANG00000030105	-	89	77.119	ENSPANG00000020919	-	99	80.833	Papio_anubis
ENSCANG00000030105	-	83	46.888	ENSPKIG00000025417	rbm38	98	46.888	Paramormyrops_kingsleyae
ENSCANG00000030105	-	78	52.535	ENSPKIG00000018122	-	97	67.257	Paramormyrops_kingsleyae
ENSCANG00000030105	-	86	59.052	ENSPSIG00000011649	RBM38	97	59.052	Pelodiscus_sinensis
ENSCANG00000030105	-	81	47.059	ENSPMGG00000017094	-	94	48.739	Periophthalmus_magnuspinnatus
ENSCANG00000030105	-	80	41.949	ENSPMGG00000011343	rbm38	94	43.644	Periophthalmus_magnuspinnatus
ENSCANG00000030105	-	89	61.667	ENSPCIG00000013648	RBM38	99	61.667	Phascolarctos_cinereus
ENSCANG00000030105	-	78	42.979	ENSPFOG00000011658	rbm38	91	44.681	Poecilia_formosa
ENSCANG00000030105	-	78	43.830	ENSPLAG00000005218	rbm38	91	44.681	Poecilia_latipinna
ENSCANG00000030105	-	78	51.073	ENSPLAG00000002500	-	92	51.073	Poecilia_latipinna
ENSCANG00000030105	-	78	42.979	ENSPMEG00000015770	rbm38	91	44.681	Poecilia_mexicana
ENSCANG00000030105	-	78	42.979	ENSPREG00000007398	rbm38	91	44.681	Poecilia_reticulata
ENSCANG00000030105	-	89	73.640	ENSPCOG00000026201	RBM38	99	80.165	Propithecus_coquereli
ENSCANG00000030105	-	71	75.641	ENSPVAG00000006457	RBM38	74	75.641	Pteropus_vampyrus
ENSCANG00000030105	-	80	51.802	ENSPNYG00000019727	-	96	67.857	Pundamilia_nyererei
ENSCANG00000030105	-	89	46.694	ENSPNYG00000021373	rbm38	97	47.458	Pundamilia_nyererei
ENSCANG00000030105	-	67	51.913	ENSPNAG00000010596	rbm38	76	51.913	Pygocentrus_nattereri
ENSCANG00000030105	-	79	52.212	ENSPNAG00000015123	-	83	66.355	Pygocentrus_nattereri
ENSCANG00000030105	-	89	72.269	ENSRNOG00000006420	Rbm38	99	72.269	Rattus_norvegicus
ENSCANG00000030105	-	89	85.581	ENSRROG00000036388	-	99	85.581	Rhinopithecus_roxellana
ENSCANG00000030105	-	79	73.148	ENSSBOG00000031053	RBM38	100	78.505	Saimiri_boliviensis_boliviensis
ENSCANG00000030105	-	78	48.636	ENSSFOG00015004453	rbm38	92	51.364	Scleropages_formosus
ENSCANG00000030105	-	80	49.362	ENSSDUG00000021082	RBM38	95	51.477	Seriola_dumerili
ENSCANG00000030105	-	80	46.835	ENSSDUG00000022611	rbm38	94	46.835	Seriola_dumerili
ENSCANG00000030105	-	80	49.362	ENSSLDG00000011778	RBM38	95	51.477	Seriola_lalandi_dorsalis
ENSCANG00000030105	-	80	50.000	ENSSLDG00000010845	rbm38	93	50.000	Seriola_lalandi_dorsalis
ENSCANG00000030105	-	80	46.610	ENSSPAG00000011113	rbm38	94	46.610	Stegastes_partitus
ENSCANG00000030105	-	81	49.315	ENSSPAG00000020989	RBM38	95	51.818	Stegastes_partitus
ENSCANG00000030105	-	89	73.950	ENSSSCG00000007504	RBM38	99	73.950	Sus_scrofa
ENSCANG00000030105	-	67	50.000	ENSTRUG00000024954	rbm38	83	47.549	Takifugu_rubripes
ENSCANG00000030105	-	80	48.945	ENSTRUG00000019869	-	95	51.899	Takifugu_rubripes
ENSCANG00000030105	-	78	52.055	ENSTNIG00000007093	-	97	54.338	Tetraodon_nigroviridis
ENSCANG00000030105	-	89	72.689	ENSUAMG00000019780	RBM38	99	73.950	Ursus_americanus
ENSCANG00000030105	-	89	72.689	ENSVVUG00000017246	RBM38	99	72.689	Vulpes_vulpes
ENSCANG00000030105	-	81	56.889	ENSXETG00000011268	rbm38	100	57.778	Xenopus_tropicalis
ENSCANG00000030105	-	54	57.343	ENSXCOG00000017324	-	64	57.857	Xiphophorus_couchianus
ENSCANG00000030105	-	78	45.455	ENSXMAG00000023662	rbm38	91	45.887	Xiphophorus_maculatus