EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCANG00000030272 (Gene tree)
Gene ID: 105516110
Gene Symbol: RBM42
Alias: MGC10433
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 8588 bases
Position: chrKN979463.1:3537533-3546120
Accession: 105516110
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000013735	RRM_1	PF00076.22	6.2e-18	1	1
ENSCANP00000013728	RRM_1	PF00076.22	7e-18	1	1
ENSCANP00000013726	RRM_1	PF00076.22	7.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000036651	RBM42-203	1125	-	ENSCANP00000013735	374 (aa)	-	A0A2K5IAS5
ENSCANT00000036644	RBM42-202	1221	-	ENSCANP00000013728	406 (aa)	-	A0A2K5IAQ5
ENSCANT00000036642	RBM42-201	1287	XM_011948180	ENSCANP00000013726	428 (aa)	XP_011803570	A0A2K5IB00
ENSCANT00000036653	RBM42-204	1005	-	ENSCANP00000013736	334 (aa)	-	A0A2K5IB13

Gene Model

Click here to download ENSCANG00000030272's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000030272's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000030272	RBM42	100	88.542	ENSG00000126254	RBM42	100	88.542	Homo_sapiens
ENSCANG00000030272	RBM42	100	87.683	ENSAMEG00000000524	RBM42	100	87.683	Ailuropoda_melanoleuca
ENSCANG00000030272	RBM42	100	88.470	ENSANAG00000027537	RBM42	100	88.470	Aotus_nancymaae
ENSCANG00000030272	RBM42	100	88.050	ENSBTAG00000013440	RBM42	100	88.050	Bos_taurus
ENSCANG00000030272	RBM42	100	87.470	ENSCJAG00000010220	RBM42	100	87.470	Callithrix_jacchus
ENSCANG00000030272	RBM42	100	81.342	ENSCAFG00020018628	RBM42	100	81.342	Canis_lupus_dingo
ENSCANG00000030272	RBM42	100	87.841	ENSCHIG00000009518	RBM42	89	99.013	Capra_hircus
ENSCANG00000030272	RBM42	100	88.285	ENSTSYG00000014688	RBM42	100	87.866	Carlito_syrichta
ENSCANG00000030272	RBM42	90	97.668	ENSCAPG00000009566	RBM42	99	97.668	Cavia_aperea
ENSCANG00000030272	RBM42	98	87.607	ENSCPOG00000012365	RBM42	99	87.841	Cavia_porcellus
ENSCANG00000030272	RBM42	100	88.889	ENSCCAG00000034440	RBM42	100	88.889	Cebus_capucinus
ENSCANG00000030272	RBM42	100	88.750	ENSCATG00000041924	RBM42	99	90.254	Cercocebus_atys
ENSCANG00000030272	RBM42	100	87.421	ENSCLAG00000012865	RBM42	99	87.421	Chinchilla_lanigera
ENSCANG00000030272	RBM42	100	86.681	ENSCSAG00000004422	RBM42	100	86.245	Chlorocebus_sabaeus
ENSCANG00000030272	RBM42	100	87.975	ENSCGRG00001018540	Rbm42	99	87.975	Cricetulus_griseus_chok1gshd
ENSCANG00000030272	RBM42	100	87.292	ENSDNOG00000037397	RBM42	100	87.292	Dasypus_novemcinctus
ENSCANG00000030272	RBM42	100	87.975	ENSDORG00000013001	Rbm42	99	87.975	Dipodomys_ordii
ENSCANG00000030272	RBM42	90	80.000	ENSETEG00000007878	RBM42	69	87.234	Echinops_telfairi
ENSCANG00000030272	RBM42	100	87.168	ENSEASG00005001074	RBM42	100	86.947	Equus_asinus_asinus
ENSCANG00000030272	RBM42	100	87.168	ENSECAG00000018215	RBM42	100	86.947	Equus_caballus
ENSCANG00000030272	RBM42	100	88.050	ENSFCAG00000006376	RBM42	100	88.050	Felis_catus
ENSCANG00000030272	RBM42	100	83.193	ENSFDAG00000007440	RBM42	99	85.714	Fukomys_damarensis
ENSCANG00000030272	RBM42	100	90.042	ENSGGOG00000009972	RBM42	99	90.042	Gorilla_gorilla
ENSCANG00000030272	RBM42	100	85.177	ENSHGLG00000008418	RBM42	99	86.709	Heterocephalus_glaber_female
ENSCANG00000030272	RBM42	100	85.177	ENSHGLG00100018667	RBM42	99	86.709	Heterocephalus_glaber_male
ENSCANG00000030272	RBM42	100	86.792	ENSSTOG00000013050	RBM42	100	86.583	Ictidomys_tridecemlineatus
ENSCANG00000030272	RBM42	100	88.323	ENSJJAG00000010421	Rbm42	99	88.323	Jaculus_jaculus
ENSCANG00000030272	RBM42	100	86.134	ENSLAFG00000014993	RBM42	99	86.134	Loxodonta_africana
ENSCANG00000030272	RBM42	100	88.750	ENSMFAG00000002758	RBM42	99	90.254	Macaca_fascicularis
ENSCANG00000030272	RBM42	100	88.750	ENSMMUG00000018954	RBM42	100	88.750	Macaca_mulatta
ENSCANG00000030272	RBM42	100	90.254	ENSMNEG00000030009	RBM42	99	90.254	Macaca_nemestrina
ENSCANG00000030272	RBM42	100	88.750	ENSMLEG00000036119	RBM42	99	90.254	Mandrillus_leucophaeus
ENSCANG00000030272	RBM42	100	88.679	ENSMICG00000009880	RBM42	100	88.679	Microcebus_murinus
ENSCANG00000030272	RBM42	100	87.553	ENSMOCG00000000405	Rbm42	99	87.553	Microtus_ochrogaster
ENSCANG00000030272	RBM42	73	96.629	ENSMODG00000013957	RBM42	83	76.632	Monodelphis_domestica
ENSCANG00000030272	RBM42	100	88.397	MGP_CAROLIEiJ_G0029536	Rbm42	99	88.397	Mus_caroli
ENSCANG00000030272	RBM42	100	88.397	ENSMUSG00000036733	Rbm42	99	88.397	Mus_musculus
ENSCANG00000030272	RBM42	100	88.397	MGP_PahariEiJ_G0012770	Rbm42	99	88.397	Mus_pahari
ENSCANG00000030272	RBM42	100	88.397	MGP_SPRETEiJ_G0030632	Rbm42	99	88.397	Mus_spretus
ENSCANG00000030272	RBM42	100	86.154	ENSMPUG00000006288	RBM42	100	85.934	Mustela_putorius_furo
ENSCANG00000030272	RBM42	100	87.421	ENSMLUG00000011334	RBM42	100	87.421	Myotis_lucifugus
ENSCANG00000030272	RBM42	100	87.975	ENSNGAG00000019698	Rbm42	99	87.975	Nannospalax_galili
ENSCANG00000030272	RBM42	81	99.342	ENSNLEG00000011272	-	94	91.899	Nomascus_leucogenys
ENSCANG00000030272	RBM42	96	77.111	ENSMEUG00000016300	RBM42	100	77.215	Notamacropus_eugenii
ENSCANG00000030272	RBM42	100	85.115	ENSOPRG00000001229	RBM42	100	79.665	Ochotona_princeps
ENSCANG00000030272	RBM42	100	87.421	ENSODEG00000013705	RBM42	99	87.421	Octodon_degus
ENSCANG00000030272	RBM42	100	85.371	ENSOCUG00000003337	RBM42	100	85.371	Oryctolagus_cuniculus
ENSCANG00000030272	RBM42	100	87.421	ENSOGAG00000004144	RBM42	100	87.421	Otolemur_garnettii
ENSCANG00000030272	RBM42	98	79.657	ENSOARG00000004926	RBM42	98	83.193	Ovis_aries
ENSCANG00000030272	RBM42	100	88.889	ENSPPAG00000037315	RBM42	100	88.889	Pan_paniscus
ENSCANG00000030272	RBM42	100	88.050	ENSPPRG00000016784	RBM42	100	88.050	Panthera_pardus
ENSCANG00000030272	RBM42	100	87.631	ENSPTIG00000019270	RBM42	100	87.631	Panthera_tigris_altaica
ENSCANG00000030272	RBM42	100	88.542	ENSPTRG00000010852	RBM42	99	90.042	Pan_troglodytes
ENSCANG00000030272	RBM42	100	90.254	ENSPANG00000017032	RBM42	100	90.254	Papio_anubis
ENSCANG00000030272	RBM42	100	88.608	ENSPEMG00000012065	Rbm42	99	88.608	Peromyscus_maniculatus_bairdii
ENSCANG00000030272	RBM42	81	96.629	ENSPCIG00000015737	RBM42	100	76.842	Phascolarctos_cinereus
ENSCANG00000030272	RBM42	100	82.887	ENSPPYG00000009871	RBM42	100	83.711	Pongo_abelii
ENSCANG00000030272	RBM42	94	96.053	ENSPCAG00000013053	RBM42	79	97.674	Procavia_capensis
ENSCANG00000030272	RBM42	100	88.679	ENSPCOG00000026433	-	100	88.679	Propithecus_coquereli
ENSCANG00000030272	RBM42	81	98.684	ENSPCOG00000020672	RBM42	81	98.498	Propithecus_coquereli
ENSCANG00000030272	RBM42	100	87.631	ENSPVAG00000012815	RBM42	100	87.631	Pteropus_vampyrus
ENSCANG00000030272	RBM42	100	88.608	ENSRNOG00000024278	Rbm42	99	88.608	Rattus_norvegicus
ENSCANG00000030272	RBM42	100	88.750	ENSRBIG00000007566	RBM42	99	90.254	Rhinopithecus_bieti
ENSCANG00000030272	RBM42	100	89.308	ENSRROG00000042313	RBM42	100	89.308	Rhinopithecus_roxellana
ENSCANG00000030272	RBM42	99	90.617	ENSSBOG00000030666	RBM42	95	98.964	Saimiri_boliviensis_boliviensis
ENSCANG00000030272	RBM42	100	86.875	ENSSARG00000010724	RBM42	100	86.875	Sorex_araneus
ENSCANG00000030272	RBM42	100	87.631	ENSSSCG00000002905	RBM42	89	98.684	Sus_scrofa
ENSCANG00000030272	RBM42	100	87.841	ENSUAMG00000020711	RBM42	100	87.841	Ursus_americanus
ENSCANG00000030272	RBM42	100	87.841	ENSUMAG00000020223	RBM42	100	87.841	Ursus_maritimus
ENSCANG00000030272	RBM42	100	86.583	ENSVVUG00000015117	RBM42	100	86.373	Vulpes_vulpes