EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000030349 (Gene tree)
Gene ID: 105514938
Gene Symbol: CHD9
Alias: BC022889|FLJ12178|KIAA0308
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Minus strand
Length: 176061 bases
Position: chrKN981060.1:1428267-1604327
Accession: 105514938
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000014317	ResIII	PF04851.15	7.5e-06	1	1
ENSCANP00000014305	ResIII	PF04851.15	7.6e-06	1	1
ENSCANP00000014325	BRK	PF07533.16	1.5e-31	1	2
ENSCANP00000014325	BRK	PF07533.16	1.5e-31	2	2
ENSCANP00000014317	BRK	PF07533.16	1.6e-30	1	2
ENSCANP00000014317	BRK	PF07533.16	1.6e-30	2	2
ENSCANP00000014305	BRK	PF07533.16	1.6e-30	1	2
ENSCANP00000014305	BRK	PF07533.16	1.6e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000037241	CHD9-202	8676	-	ENSCANP00000014317	2891 (aa)	-	A0A2K5ICX4
ENSCANT00000037229	CHD9-201	8706	XM_011946605	ENSCANP00000014305	2901 (aa)	XP_011801995	A0A2K5ICE7
ENSCANT00000037261	CHD9-204	1353	-	ENSCANP00000014337	450 (aa)	-	A0A2K5ICZ3
ENSCANT00000037249	CHD9-203	2901	-	ENSCANP00000014325	966 (aa)	-	A0A2K5ICG7

Gene Model

Click here to download ENSCANG00000030349's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000030349's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000030349	CHD9	91	46.667	ENSCANG00000043435	CHD6	99	71.743
ENSCANG00000030349	CHD9	74	57.013	ENSCANG00000042948	CHD8	81	68.750
ENSCANG00000030349	CHD9	87	69.705	ENSCANG00000041382	CHD7	84	66.709

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000030349	CHD9	100	99.267	ENSG00000177200	CHD9	100	100.000	Homo_sapiens
ENSCANG00000030349	CHD9	91	70.107	ENSAPOG00000023034	chd9	66	75.179	Acanthochromis_polyacanthus
ENSCANG00000030349	CHD9	100	97.436	ENSAMEG00000016232	CHD9	100	96.110	Ailuropoda_melanoleuca
ENSCANG00000030349	CHD9	91	71.631	ENSACIG00000004097	chd9	73	61.327	Amphilophus_citrinellus
ENSCANG00000030349	CHD9	91	69.718	ENSAOCG00000005487	chd9	67	75.239	Amphiprion_ocellaris
ENSCANG00000030349	CHD9	91	70.463	ENSAPEG00000009859	chd9	99	61.340	Amphiprion_percula
ENSCANG00000030349	CHD9	91	71.174	ENSATEG00000002748	chd9	99	61.946	Anabas_testudineus
ENSCANG00000030349	CHD9	98	91.941	ENSAPLG00000002826	CHD9	74	85.922	Anas_platyrhynchos
ENSCANG00000030349	CHD9	98	89.011	ENSACAG00000016150	CHD9	98	81.315	Anolis_carolinensis
ENSCANG00000030349	CHD9	100	98.901	ENSANAG00000015630	CHD9	100	98.901	Aotus_nancymaae
ENSCANG00000030349	CHD9	92	69.930	ENSACLG00000016899	chd9	73	63.507	Astatotilapia_calliptera
ENSCANG00000030349	CHD9	98	70.526	ENSAMXG00000005652	chd9	68	74.820	Astyanax_mexicanus
ENSCANG00000030349	CHD9	100	98.168	ENSBTAG00000002287	CHD9	100	95.351	Bos_taurus
ENSCANG00000030349	CHD9	100	99.267	ENSCJAG00000001573	CHD9	100	99.267	Callithrix_jacchus
ENSCANG00000030349	CHD9	100	98.168	ENSCAFG00000009699	CHD9	100	96.280	Canis_familiaris
ENSCANG00000030349	CHD9	100	98.168	ENSCAFG00020002879	CHD9	100	98.168	Canis_lupus_dingo
ENSCANG00000030349	CHD9	100	97.802	ENSTSYG00000007693	CHD9	100	97.802	Carlito_syrichta
ENSCANG00000030349	CHD9	82	96.774	ENSCAPG00000011604	CHD9	81	79.513	Cavia_aperea
ENSCANG00000030349	CHD9	100	97.070	ENSCPOG00000036544	CHD9	100	91.012	Cavia_porcellus
ENSCANG00000030349	CHD9	100	99.267	ENSCCAG00000036178	CHD9	100	99.267	Cebus_capucinus
ENSCANG00000030349	CHD9	100	100.000	ENSCATG00000036753	CHD9	100	100.000	Cercocebus_atys
ENSCANG00000030349	CHD9	98	98.535	ENSCLAG00000007137	CHD9	99	97.572	Chinchilla_lanigera
ENSCANG00000030349	CHD9	100	100.000	ENSCSAG00000005311	CHD9	100	99.449	Chlorocebus_sabaeus
ENSCANG00000030349	CHD9	74	98.077	ENSCHOG00000003935	CHD9	76	98.077	Choloepus_hoffmanni
ENSCANG00000030349	CHD9	98	86.813	ENSCPBG00000012459	CHD9	99	91.618	Chrysemys_picta_bellii
ENSCANG00000030349	CHD9	98	96.337	ENSCGRG00001016150	Chd9	99	91.704	Cricetulus_griseus_chok1gshd
ENSCANG00000030349	CHD9	98	96.337	ENSCGRG00000012850	Chd9	99	96.185	Cricetulus_griseus_crigri
ENSCANG00000030349	CHD9	92	68.858	ENSCSEG00000009209	chd9	67	72.365	Cynoglossus_semilaevis
ENSCANG00000030349	CHD9	91	70.280	ENSCVAG00000016195	chd9	73	62.540	Cyprinodon_variegatus
ENSCANG00000030349	CHD9	97	69.014	ENSDARG00000074498	chd9	67	73.887	Danio_rerio
ENSCANG00000030349	CHD9	100	95.238	ENSDNOG00000006045	CHD9	100	94.860	Dasypus_novemcinctus
ENSCANG00000030349	CHD9	100	95.238	ENSDORG00000008523	-	100	92.765	Dipodomys_ordii
ENSCANG00000030349	CHD9	92	100.000	ENSETEG00000009565	CHD9	94	96.842	Echinops_telfairi
ENSCANG00000030349	CHD9	100	96.073	ENSEASG00005014832	CHD9	100	96.073	Equus_asinus_asinus
ENSCANG00000030349	CHD9	100	97.802	ENSECAG00000011505	CHD9	100	96.040	Equus_caballus
ENSCANG00000030349	CHD9	83	97.790	ENSEEUG00000014515	CHD9	86	97.790	Erinaceus_europaeus
ENSCANG00000030349	CHD9	94	71.579	ENSELUG00000006031	chd9	97	67.145	Esox_lucius
ENSCANG00000030349	CHD9	100	97.802	ENSFCAG00000022534	CHD9	100	97.802	Felis_catus
ENSCANG00000030349	CHD9	98	91.575	ENSFALG00000013276	CHD9	99	88.052	Ficedula_albicollis
ENSCANG00000030349	CHD9	100	98.168	ENSFDAG00000021037	CHD9	100	94.353	Fukomys_damarensis
ENSCANG00000030349	CHD9	91	68.905	ENSFHEG00000006068	chd9	68	74.776	Fundulus_heteroclitus
ENSCANG00000030349	CHD9	81	68.729	ENSGMOG00000006040	chd9	83	76.866	Gadus_morhua
ENSCANG00000030349	CHD9	95	85.555	ENSGALG00000039178	CHD9	98	85.843	Gallus_gallus
ENSCANG00000030349	CHD9	91	69.580	ENSGAFG00000010014	chd9	92	65.873	Gambusia_affinis
ENSCANG00000030349	CHD9	98	67.832	ENSGACG00000016694	chd9	68	74.924	Gasterosteus_aculeatus
ENSCANG00000030349	CHD9	98	83.369	ENSGAGG00000001048	-	98	87.179	Gopherus_agassizii
ENSCANG00000030349	CHD9	100	99.634	ENSGGOG00000014816	CHD9	100	99.634	Gorilla_gorilla
ENSCANG00000030349	CHD9	92	70.526	ENSHBUG00000023322	chd9	96	70.280	Haplochromis_burtoni
ENSCANG00000030349	CHD9	100	98.168	ENSHGLG00000014938	CHD9	99	98.035	Heterocephalus_glaber_female
ENSCANG00000030349	CHD9	100	91.925	ENSHGLG00100007620	-	100	93.407	Heterocephalus_glaber_male
ENSCANG00000030349	CHD9	91	68.858	ENSHCOG00000000937	chd9	69	73.329	Hippocampus_comes
ENSCANG00000030349	CHD9	92	72.993	ENSIPUG00000016448	chd9	97	74.088	Ictalurus_punctatus
ENSCANG00000030349	CHD9	100	97.070	ENSSTOG00000022273	CHD9	99	98.266	Ictidomys_tridecemlineatus
ENSCANG00000030349	CHD9	100	97.070	ENSJJAG00000015741	-	100	94.045	Jaculus_jaculus
ENSCANG00000030349	CHD9	91	71.731	ENSKMAG00000016784	chd9	66	74.896	Kryptolebias_marmoratus
ENSCANG00000030349	CHD9	91	69.366	ENSLBEG00000012077	chd9	66	74.081	Labrus_bergylta
ENSCANG00000030349	CHD9	98	73.343	ENSLACG00000005557	CHD9	73	71.813	Latimeria_chalumnae
ENSCANG00000030349	CHD9	98	75.714	ENSLOCG00000007225	chd9	99	73.347	Lepisosteus_oculatus
ENSCANG00000030349	CHD9	100	95.971	ENSLAFG00000015374	CHD9	100	94.972	Loxodonta_africana
ENSCANG00000030349	CHD9	100	100.000	ENSMFAG00000041354	CHD9	100	100.000	Macaca_fascicularis
ENSCANG00000030349	CHD9	100	100.000	ENSMMUG00000016310	CHD9	100	100.000	Macaca_mulatta
ENSCANG00000030349	CHD9	100	99.634	ENSMNEG00000031494	CHD9	100	99.483	Macaca_nemestrina
ENSCANG00000030349	CHD9	100	100.000	ENSMLEG00000043219	CHD9	100	100.000	Mandrillus_leucophaeus
ENSCANG00000030349	CHD9	91	69.718	ENSMAMG00000003909	chd9	97	61.190	Mastacembelus_armatus
ENSCANG00000030349	CHD9	92	70.526	ENSMZEG00005006581	chd9	99	61.290	Maylandia_zebra
ENSCANG00000030349	CHD9	98	92.308	ENSMGAG00000004642	CHD9	72	80.903	Meleagris_gallopavo
ENSCANG00000030349	CHD9	95	91.441	ENSMAUG00000000526	-	98	96.800	Mesocricetus_auratus
ENSCANG00000030349	CHD9	100	97.070	ENSMICG00000016679	CHD9	100	97.070	Microcebus_murinus
ENSCANG00000030349	CHD9	98	92.161	ENSMOCG00000010691	-	98	95.971	Microtus_ochrogaster
ENSCANG00000030349	CHD9	91	71.025	ENSMMOG00000016406	chd9	74	62.981	Mola_mola
ENSCANG00000030349	CHD9	98	84.266	ENSMODG00000013142	-	99	92.163	Monodelphis_domestica
ENSCANG00000030349	CHD9	91	64.706	ENSMALG00000013306	chd9	73	62.597	Monopterus_albus
ENSCANG00000030349	CHD9	98	94.872	MGP_CAROLIEiJ_G0031364	Chd9	99	90.496	Mus_caroli
ENSCANG00000030349	CHD9	98	94.505	ENSMUSG00000056608	Chd9	99	95.145	Mus_musculus
ENSCANG00000030349	CHD9	98	94.872	MGP_PahariEiJ_G0022964	Chd9	99	88.392	Mus_pahari
ENSCANG00000030349	CHD9	98	94.139	MGP_SPRETEiJ_G0032483	Chd9	99	90.146	Mus_spretus
ENSCANG00000030349	CHD9	100	97.802	ENSMPUG00000003285	CHD9	100	95.556	Mustela_putorius_furo
ENSCANG00000030349	CHD9	100	98.168	ENSMLUG00000004456	CHD9	100	93.627	Myotis_lucifugus
ENSCANG00000030349	CHD9	100	92.029	ENSNGAG00000015820	-	100	96.703	Nannospalax_galili
ENSCANG00000030349	CHD9	92	71.277	ENSNBRG00000009423	chd9	99	60.948	Neolamprologus_brichardi
ENSCANG00000030349	CHD9	90	99.041	ENSNLEG00000001026	CHD9	100	99.041	Nomascus_leucogenys
ENSCANG00000030349	CHD9	76	96.078	ENSMEUG00000008222	-	84	96.078	Notamacropus_eugenii
ENSCANG00000030349	CHD9	87	100.000	ENSOPRG00000011168	CHD9	85	97.429	Ochotona_princeps
ENSCANG00000030349	CHD9	98	96.715	ENSODEG00000004466	CHD9	99	94.346	Octodon_degus
ENSCANG00000030349	CHD9	92	70.175	ENSONIG00000002816	chd9	87	63.177	Oreochromis_niloticus
ENSCANG00000030349	CHD9	100	92.727	ENSOANG00000013401	CHD9	100	86.954	Ornithorhynchus_anatinus
ENSCANG00000030349	CHD9	100	96.703	ENSOCUG00000001016	CHD9	99	97.229	Oryctolagus_cuniculus
ENSCANG00000030349	CHD9	92	70.175	ENSORLG00000013810	chd9	67	74.821	Oryzias_latipes
ENSCANG00000030349	CHD9	92	73.477	ENSORLG00020020665	chd9	75	63.189	Oryzias_latipes_hni
ENSCANG00000030349	CHD9	92	70.486	ENSORLG00015019126	chd9	96	61.328	Oryzias_latipes_hsok
ENSCANG00000030349	CHD9	100	97.436	ENSOGAG00000002110	CHD9	100	94.838	Otolemur_garnettii
ENSCANG00000030349	CHD9	100	96.377	ENSOARG00000017664	CHD9	100	95.046	Ovis_aries
ENSCANG00000030349	CHD9	100	99.634	ENSPPAG00000039388	-	100	98.051	Pan_paniscus
ENSCANG00000030349	CHD9	100	97.436	ENSPPRG00000004801	CHD9	100	97.436	Panthera_pardus
ENSCANG00000030349	CHD9	100	94.764	ENSPTIG00000021854	CHD9	100	94.730	Panthera_tigris_altaica
ENSCANG00000030349	CHD9	100	99.634	ENSPTRG00000008113	CHD9	100	99.634	Pan_troglodytes
ENSCANG00000030349	CHD9	100	100.000	ENSPANG00000019307	CHD9	100	100.000	Papio_anubis
ENSCANG00000030349	CHD9	94	69.580	ENSPKIG00000025401	-	71	62.776	Paramormyrops_kingsleyae
ENSCANG00000030349	CHD9	90	72.662	ENSPKIG00000021876	chd9	68	76.615	Paramormyrops_kingsleyae
ENSCANG00000030349	CHD9	64	84.865	ENSPSIG00000008099	CHD9	99	84.811	Pelodiscus_sinensis
ENSCANG00000030349	CHD9	92	62.732	ENSPMGG00000021802	chd9	98	72.857	Periophthalmus_magnuspinnatus
ENSCANG00000030349	CHD9	98	91.102	ENSPEMG00000021464	-	98	97.070	Peromyscus_maniculatus_bairdii
ENSCANG00000030349	CHD9	64	61.538	ENSPMAG00000006035	-	72	68.003	Petromyzon_marinus
ENSCANG00000030349	CHD9	89	88.009	ENSPCIG00000017215	CHD9	97	89.817	Phascolarctos_cinereus
ENSCANG00000030349	CHD9	91	69.231	ENSPFOG00000015839	chd9	92	65.886	Poecilia_formosa
ENSCANG00000030349	CHD9	91	69.965	ENSPLAG00000011118	chd9	92	66.002	Poecilia_latipinna
ENSCANG00000030349	CHD9	91	70.318	ENSPMEG00000015106	chd9	66	71.084	Poecilia_mexicana
ENSCANG00000030349	CHD9	91	69.965	ENSPREG00000006473	chd9	92	66.551	Poecilia_reticulata
ENSCANG00000030349	CHD9	100	99.267	ENSPPYG00000007348	CHD9	100	99.000	Pongo_abelii
ENSCANG00000030349	CHD9	77	96.415	ENSPCAG00000007564	CHD9	86	96.415	Procavia_capensis
ENSCANG00000030349	CHD9	100	98.168	ENSPCOG00000028433	CHD9	100	98.168	Propithecus_coquereli
ENSCANG00000030349	CHD9	97	93.666	ENSPVAG00000015617	CHD9	98	93.703	Pteropus_vampyrus
ENSCANG00000030349	CHD9	92	70.526	ENSPNYG00000010947	chd9	66	75.597	Pundamilia_nyererei
ENSCANG00000030349	CHD9	92	71.273	ENSPNAG00000024141	chd9	68	75.075	Pygocentrus_nattereri
ENSCANG00000030349	CHD9	88	93.220	ENSRNOG00000049302	Chd9	100	90.159	Rattus_norvegicus
ENSCANG00000030349	CHD9	100	100.000	ENSRBIG00000035553	CHD9	100	100.000	Rhinopithecus_bieti
ENSCANG00000030349	CHD9	100	100.000	ENSRROG00000033278	CHD9	100	100.000	Rhinopithecus_roxellana
ENSCANG00000030349	CHD9	100	98.535	ENSSBOG00000030240	CHD9	100	98.535	Saimiri_boliviensis_boliviensis
ENSCANG00000030349	CHD9	98	90.909	ENSSHAG00000002719	CHD9	100	87.865	Sarcophilus_harrisii
ENSCANG00000030349	CHD9	93	71.326	ENSSFOG00015001327	chd9	67	75.912	Scleropages_formosus
ENSCANG00000030349	CHD9	93	72.143	ENSSFOG00015020209	chd9	99	69.787	Scleropages_formosus
ENSCANG00000030349	CHD9	91	68.531	ENSSMAG00000008953	chd9	99	62.650	Scophthalmus_maximus
ENSCANG00000030349	CHD9	91	70.423	ENSSDUG00000006139	chd9	99	59.779	Seriola_dumerili
ENSCANG00000030349	CHD9	91	71.277	ENSSLDG00000017818	chd9	99	60.392	Seriola_lalandi_dorsalis
ENSCANG00000030349	CHD9	100	95.956	ENSSARG00000010632	CHD9	71	97.517	Sorex_araneus
ENSCANG00000030349	CHD9	98	85.169	ENSSPUG00000017465	-	98	90.476	Sphenodon_punctatus
ENSCANG00000030349	CHD9	92	69.366	ENSSPAG00000021649	chd9	67	74.896	Stegastes_partitus
ENSCANG00000030349	CHD9	90	85.583	ENSTGUG00000007476	CHD9	100	85.774	Taeniopygia_guttata
ENSCANG00000030349	CHD9	97	72.500	ENSTRUG00000009125	chd9	73	62.801	Takifugu_rubripes
ENSCANG00000030349	CHD9	75	67.958	ENSTNIG00000003825	chd9	85	81.951	Tetraodon_nigroviridis
ENSCANG00000030349	CHD9	66	96.396	ENSTBEG00000016052	-	81	96.396	Tupaia_belangeri
ENSCANG00000030349	CHD9	90	95.362	ENSTTRG00000012674	CHD9	90	95.362	Tursiops_truncatus
ENSCANG00000030349	CHD9	100	98.168	ENSUAMG00000022706	CHD9	100	98.168	Ursus_americanus
ENSCANG00000030349	CHD9	90	94.079	ENSUMAG00000004043	CHD9	98	98.188	Ursus_maritimus
ENSCANG00000030349	CHD9	98	96.703	ENSVPAG00000001374	CHD9	97	95.058	Vicugna_pacos
ENSCANG00000030349	CHD9	100	98.168	ENSVVUG00000019435	CHD9	100	96.349	Vulpes_vulpes
ENSCANG00000030349	CHD9	98	80.952	ENSXETG00000000349	chd9	96	76.858	Xenopus_tropicalis
ENSCANG00000030349	CHD9	91	69.965	ENSXCOG00000012997	chd9	67	74.970	Xiphophorus_couchianus
ENSCANG00000030349	CHD9	91	69.580	ENSXMAG00000016192	chd9	99	60.333	Xiphophorus_maculatus