EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000030513 (Gene tree)
Gene ID: 105527772
Gene Symbol: -
Alias: -
Full Name: DNA dC->dU-editing enzyme APOBEC-3A-like
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Minus strand
Length: 5721 bases
Position: chrKN985306.1:2415576-2421296
Accession: 105527772
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000014149	APOBEC_N	PF08210.11	9.4e-49	1	1
ENSCANP00000014152	APOBEC_N	PF08210.11	1e-48	1	1
ENSCANP00000014149	APOBEC_C	PF05240.14	2.4e-31	1	1
ENSCANP00000014152	APOBEC_C	PF05240.14	2.5e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000037073	-	1094	XM_011964211	ENSCANP00000014152	199 (aa)	XP_011819601	A0A2K5ICG0
ENSCANT00000037070	-	1394	-	ENSCANP00000014149	195 (aa)	-	A0A2K5IBX2

Gene Model

Click here to download ENSCANG00000030513's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000030513's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000030513	-	98	37.705	ENSCANG00000033269	-	97	38.503
ENSCANG00000030513	-	97	40.306	ENSCANG00000039177	APOBEC3C	99	40.306
ENSCANG00000030513	-	94	46.277	ENSCANG00000035131	AICDA	89	46.277
ENSCANG00000030513	-	96	75.000	ENSCANG00000029968	-	74	75.000
ENSCANG00000030513	-	100	41.176	ENSCANG00000031957	-	99	41.176
ENSCANG00000030513	-	90	31.844	ENSCANG00000035072	APOBEC2	75	33.333
ENSCANG00000030513	-	94	42.246	ENSCANG00000032904	-	95	42.246

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000030513	-	97	82.474	ENSG00000179750	APOBEC3B	99	82.474	Homo_sapiens
ENSCANG00000030513	-	100	83.417	ENSG00000128383	APOBEC3A	100	83.417	Homo_sapiens
ENSCANG00000030513	-	97	55.276	ENSCJAG00000012500	-	99	55.276	Callithrix_jacchus
ENSCANG00000030513	-	100	58.586	ENSTSYG00000035593	-	100	58.416	Carlito_syrichta
ENSCANG00000030513	-	98	67.010	ENSCCAG00000027450	-	98	67.010	Cebus_capucinus
ENSCANG00000030513	-	100	88.119	ENSCATG00000013527	-	100	88.119	Cercocebus_atys
ENSCANG00000030513	-	97	86.316	ENSCSAG00000006445	-	77	86.316	Chlorocebus_sabaeus
ENSCANG00000030513	-	74	87.075	ENSCSAG00000018401	-	70	87.075	Chlorocebus_sabaeus
ENSCANG00000030513	-	97	80.412	ENSGGOG00000006721	APOBEC3B	99	80.412	Gorilla_gorilla
ENSCANG00000030513	-	100	84.653	ENSMFAG00000008980	APOBEC3A	100	84.653	Macaca_fascicularis
ENSCANG00000030513	-	98	90.526	ENSMMUG00000004015	-	98	90.625	Macaca_mulatta
ENSCANG00000030513	-	100	85.149	ENSMMUG00000042504	APOBEC3A	100	85.149	Macaca_mulatta
ENSCANG00000030513	-	97	84.507	ENSMNEG00000043211	-	94	84.507	Macaca_nemestrina
ENSCANG00000030513	-	97	88.144	ENSMLEG00000004809	-	99	88.144	Mandrillus_leucophaeus
ENSCANG00000030513	-	100	82.915	ENSNLEG00000015215	-	100	82.915	Nomascus_leucogenys
ENSCANG00000030513	-	97	84.021	ENSPPAG00000009288	APOBEC3B	99	84.021	Pan_paniscus
ENSCANG00000030513	-	100	81.407	ENSPTRG00000014384	APOBEC3B	100	81.407	Pan_troglodytes
ENSCANG00000030513	-	100	86.139	ENSPANG00000006941	APOBEC3B	100	86.139	Papio_anubis
ENSCANG00000030513	-	97	80.423	ENSPPYG00000011831	-	99	80.412	Pongo_abelii
ENSCANG00000030513	-	74	57.432	ENSPCOG00000017606	-	94	57.432	Propithecus_coquereli
ENSCANG00000030513	-	100	94.359	ENSRBIG00000042829	-	100	95.187	Rhinopithecus_bieti
ENSCANG00000030513	-	100	94.975	ENSRROG00000028773	APOBEC3G	100	95.187	Rhinopithecus_roxellana