EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000030552 (Gene tree)
Gene ID: 105502545
Gene Symbol: RBM12
Alias: HRIHFB2091|KIAA0765|SWAN
Full Name: copine 1
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 38957 bases
Position: chrKN985766.1:18321673-18360629
Accession: 105502545
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000014618	RRM_1	PF00076.22	1.9e-30	1	3
ENSCANP00000014618	RRM_1	PF00076.22	1.9e-30	2	3
ENSCANP00000014618	RRM_1	PF00076.22	1.9e-30	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000037547	RBM12-203	2865	-	ENSCANP00000014618	954 (aa)	-	A0A2K5ID76
ENSCANT00000037551	RBM12-204	2673	XM_011929141	ENSCANP00000014622	542 (aa)	XP_011784531	A0A2K5IDS9
ENSCANT00000037538	RBM12-202	2010	XM_011929144	ENSCANP00000014609	569 (aa)	XP_011784534	A0A2K5ID85
ENSCANT00000037534	RBM12-201	1782	-	ENSCANP00000014605	593 (aa)	-	A0A2K5ID99

Gene Model

Click here to download ENSCANG00000030552's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000030552's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000030552	RBM12	54	72.414	ENSCANG00000030379	RBM12B	58	72.414

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000030552	RBM12	98	99.356	ENSG00000244462	RBM12	100	99.356	Homo_sapiens
ENSCANG00000030552	RBM12	98	96.030	ENSAMEG00000019189	RBM12	100	96.030	Ailuropoda_melanoleuca
ENSCANG00000030552	RBM12	73	73.669	ENSACAG00000006330	RBM12	99	78.293	Anolis_carolinensis
ENSCANG00000030552	RBM12	100	98.532	ENSANAG00000032596	RBM12	100	98.532	Aotus_nancymaae
ENSCANG00000030552	RBM12	98	92.268	ENSBTAG00000044015	RBM12	100	91.536	Bos_taurus
ENSCANG00000030552	RBM12	100	95.073	ENSCAFG00000008256	RBM12	100	94.340	Canis_familiaris
ENSCANG00000030552	RBM12	98	94.635	ENSCAFG00020005650	RBM12	100	94.206	Canis_lupus_dingo
ENSCANG00000030552	RBM12	98	94.421	ENSCHIG00000024592	RBM12	100	93.670	Capra_hircus
ENSCANG00000030552	RBM12	100	94.444	ENSTSYG00000030563	RBM12	100	94.654	Carlito_syrichta
ENSCANG00000030552	RBM12	82	84.024	ENSCAPG00000006176	RBM12	80	93.581	Cavia_aperea
ENSCANG00000030552	RBM12	98	85.271	ENSCPOG00000035170	RBM12	100	93.581	Cavia_porcellus
ENSCANG00000030552	RBM12	94	94.843	ENSCCAG00000036056	-	98	94.843	Cebus_capucinus
ENSCANG00000030552	RBM12	90	89.418	ENSCCAG00000035899	-	100	76.288	Cebus_capucinus
ENSCANG00000030552	RBM12	100	99.476	ENSCATG00000030934	RBM12	100	99.476	Cercocebus_atys
ENSCANG00000030552	RBM12	98	93.240	ENSCLAG00000017230	RBM12	100	93.240	Chinchilla_lanigera
ENSCANG00000030552	RBM12	98	81.000	ENSCGRG00001021144	Rbm12	100	86.030	Cricetulus_griseus_chok1gshd
ENSCANG00000030552	RBM12	98	81.000	ENSCGRG00000012719	Rbm12	100	86.030	Cricetulus_griseus_crigri
ENSCANG00000030552	RBM12	98	93.590	ENSDORG00000028509	-	100	92.949	Dipodomys_ordii
ENSCANG00000030552	RBM12	73	86.305	ENSDORG00000000606	-	100	81.269	Dipodomys_ordii
ENSCANG00000030552	RBM12	54	65.649	ENSEBUG00000016806	rbm12	89	65.649	Eptatretus_burgeri
ENSCANG00000030552	RBM12	98	94.957	ENSECAG00000021997	RBM12	100	94.099	Equus_caballus
ENSCANG00000030552	RBM12	98	71.996	ENSFALG00000012516	RBM12	100	73.291	Ficedula_albicollis
ENSCANG00000030552	RBM12	98	93.777	ENSFDAG00000014663	RBM12	100	93.348	Fukomys_damarensis
ENSCANG00000030552	RBM12	98	79.207	ENSGALG00000030253	RBM12	100	79.636	Gallus_gallus
ENSCANG00000030552	RBM12	100	99.371	ENSGGOG00000028500	RBM12	100	99.371	Gorilla_gorilla
ENSCANG00000030552	RBM12	98	94.099	ENSHGLG00000013208	RBM12	100	93.670	Heterocephalus_glaber_female
ENSCANG00000030552	RBM12	88	97.179	ENSHGLG00100019158	RBM12	90	97.179	Heterocephalus_glaber_male
ENSCANG00000030552	RBM12	98	90.021	ENSSTOG00000019739	RBM12	100	89.811	Ictidomys_tridecemlineatus
ENSCANG00000030552	RBM12	98	93.777	ENSLAFG00000010341	RBM12	100	93.348	Loxodonta_africana
ENSCANG00000030552	RBM12	100	99.476	ENSMFAG00000032583	RBM12	100	99.476	Macaca_fascicularis
ENSCANG00000030552	RBM12	98	99.571	ENSMMUG00000020960	CPNE1	100	99.571	Macaca_mulatta
ENSCANG00000030552	RBM12	100	99.581	ENSMNEG00000045365	RBM12	100	99.581	Macaca_nemestrina
ENSCANG00000030552	RBM12	100	99.581	ENSMLEG00000032492	RBM12	100	99.581	Mandrillus_leucophaeus
ENSCANG00000030552	RBM12	99	78.105	ENSMGAG00000001502	RBM12	100	79.479	Meleagris_gallopavo
ENSCANG00000030552	RBM12	98	86.734	ENSMAUG00000012800	Rbm12	100	87.236	Mesocricetus_auratus
ENSCANG00000030552	RBM12	98	85.086	ENSMICG00000029540	-	72	84.317	Microcebus_murinus
ENSCANG00000030552	RBM12	100	93.082	ENSMICG00000032761	-	100	93.606	Microcebus_murinus
ENSCANG00000030552	RBM12	98	80.020	ENSMOCG00000012950	Rbm12	100	92.351	Microtus_ochrogaster
ENSCANG00000030552	RBM12	100	85.115	ENSMODG00000001591	RBM12	100	84.906	Monodelphis_domestica
ENSCANG00000030552	RBM12	98	77.483	MGP_CAROLIEiJ_G0024551	Rbm12	98	92.867	Mus_caroli
ENSCANG00000030552	RBM12	98	85.055	ENSMUSG00000089824	Rbm12	100	92.439	Mus_musculus
ENSCANG00000030552	RBM12	98	78.075	MGP_PahariEiJ_G0025996	Rbm12	100	92.867	Mus_pahari
ENSCANG00000030552	RBM12	71	93.971	MGP_SPRETEiJ_G0025473	Rbm12	99	92.582	Mus_spretus
ENSCANG00000030552	RBM12	98	94.528	ENSMPUG00000017789	-	100	93.777	Mustela_putorius_furo
ENSCANG00000030552	RBM12	100	94.444	ENSMLUG00000011217	RBM12	100	93.711	Myotis_lucifugus
ENSCANG00000030552	RBM12	98	80.402	ENSNGAG00000015846	Rbm12	100	86.359	Nannospalax_galili
ENSCANG00000030552	RBM12	100	99.057	ENSNLEG00000010268	RBM12	100	99.057	Nomascus_leucogenys
ENSCANG00000030552	RBM12	98	84.549	ENSMEUG00000007621	RBM12	100	84.335	Notamacropus_eugenii
ENSCANG00000030552	RBM12	98	91.826	ENSOPRG00000005687	RBM12	100	91.401	Ochotona_princeps
ENSCANG00000030552	RBM12	84	88.916	ENSODEG00000013870	RBM12	100	85.933	Octodon_degus
ENSCANG00000030552	RBM12	100	99.371	ENSPPAG00000040719	RBM12	100	99.371	Pan_paniscus
ENSCANG00000030552	RBM12	100	99.371	ENSPTRG00000040708	-	100	99.371	Pan_troglodytes
ENSCANG00000030552	RBM12	100	99.371	ENSPTRG00000013446	RBM12	100	99.371	Pan_troglodytes
ENSCANG00000030552	RBM12	100	99.581	ENSPANG00000020003	CPNE1	100	99.581	Papio_anubis
ENSCANG00000030552	RBM12	88	85.672	ENSPSIG00000007369	RBM12	92	93.103	Pelodiscus_sinensis
ENSCANG00000030552	RBM12	98	79.860	ENSPEMG00000017769	Rbm12	100	85.119	Peromyscus_maniculatus_bairdii
ENSCANG00000030552	RBM12	66	64.356	ENSPFOG00000023551	rbm12	98	78.873	Poecilia_formosa
ENSCANG00000030552	RBM12	98	99.251	ENSPPYG00000010960	RBM12	100	99.251	Pongo_abelii
ENSCANG00000030552	RBM12	98	92.382	ENSPCAG00000008653	RBM12	100	91.631	Procavia_capensis
ENSCANG00000030552	RBM12	100	95.493	ENSPCOG00000023724	RBM12	100	95.493	Propithecus_coquereli
ENSCANG00000030552	RBM12	81	94.675	ENSPVAG00000014937	RBM12	100	94.099	Pteropus_vampyrus
ENSCANG00000030552	RBM12	73	92.582	ENSRNOG00000049913	LOC100910990	97	92.582	Rattus_norvegicus
ENSCANG00000030552	RBM12	73	92.582	ENSRNOG00000019723	Rbm12	97	92.582	Rattus_norvegicus
ENSCANG00000030552	RBM12	100	99.790	ENSRBIG00000042965	RBM12	100	99.790	Rhinopithecus_bieti
ENSCANG00000030552	RBM12	100	99.790	ENSRROG00000037485	RBM12	100	99.790	Rhinopithecus_roxellana
ENSCANG00000030552	RBM12	100	98.428	ENSSBOG00000027633	RBM12	100	98.428	Saimiri_boliviensis_boliviensis
ENSCANG00000030552	RBM12	98	85.515	ENSSHAG00000018585	RBM12	100	85.300	Sarcophilus_harrisii
ENSCANG00000030552	RBM12	98	94.557	ENSSSCG00000036156	RBM12	100	93.810	Sus_scrofa
ENSCANG00000030552	RBM12	98	79.721	ENSTGUG00000003002	RBM12	100	79.185	Taeniopygia_guttata
ENSCANG00000030552	RBM12	98	94.421	ENSTTRG00000017035	RBM12	100	93.670	Tursiops_truncatus
ENSCANG00000030552	RBM12	98	94.866	ENSUAMG00000010430	RBM12	100	94.099	Ursus_americanus
ENSCANG00000030552	RBM12	86	100.000	ENSVPAG00000003812	RBM12	87	100.000	Vicugna_pacos
ENSCANG00000030552	RBM12	98	60.127	ENSXETG00000033541	RBM12	74	67.171	Xenopus_tropicalis