EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCANG00000030709 (Gene tree)
Gene ID: 105525529
Gene Symbol: LSG1
Alias: FLJ11301
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 29261 bases
Position: chrKN984150.1:3360121-3389381
Accession: 105525529
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000014578	MMR_HSR1	PF01926.23	8.4e-14	1	1
ENSCANP00000014570	MMR_HSR1	PF01926.23	8.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000037499	LSG1-201	3558	XM_011961208	ENSCANP00000014570	658 (aa)	XP_011816598	A0A2K5ID64
ENSCANT00000037507	LSG1-202	1959	-	ENSCANP00000014578	652 (aa)	-	A0A2K5ID35

Gene Model

Click here to download ENSCANG00000030709's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000030709's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000030709	LSG1	100	95.593	ENSG00000041802	LSG1	100	95.593	Homo_sapiens
ENSCANG00000030709	LSG1	99	64.545	ENSAPOG00000009694	lsg1	99	65.152	Acanthochromis_polyacanthus
ENSCANG00000030709	LSG1	99	82.549	ENSAMEG00000009343	LSG1	99	82.549	Ailuropoda_melanoleuca
ENSCANG00000030709	LSG1	98	63.975	ENSACIG00000012406	lsg1	99	64.795	Amphilophus_citrinellus
ENSCANG00000030709	LSG1	99	64.242	ENSAOCG00000016066	lsg1	99	64.848	Amphiprion_ocellaris
ENSCANG00000030709	LSG1	99	64.848	ENSAPEG00000003252	lsg1	99	64.848	Amphiprion_percula
ENSCANG00000030709	LSG1	98	64.715	ENSATEG00000011794	lsg1	99	63.897	Anabas_testudineus
ENSCANG00000030709	LSG1	95	64.762	ENSACAG00000004222	LSG1	99	64.229	Anolis_carolinensis
ENSCANG00000030709	LSG1	100	94.073	ENSANAG00000021153	LSG1	100	94.073	Aotus_nancymaae
ENSCANG00000030709	LSG1	99	62.819	ENSACLG00000000520	lsg1	99	63.746	Astatotilapia_calliptera
ENSCANG00000030709	LSG1	99	63.433	ENSAMXG00000008271	lsg1	99	63.540	Astyanax_mexicanus
ENSCANG00000030709	LSG1	100	84.825	ENSBTAG00000008461	LSG1	100	85.129	Bos_taurus
ENSCANG00000030709	LSG1	67	51.531	WBGene00016907	C53H9.2	82	58.065	Caenorhabditis_elegans
ENSCANG00000030709	LSG1	100	93.161	ENSCJAG00000013962	LSG1	100	93.161	Callithrix_jacchus
ENSCANG00000030709	LSG1	95	84.800	ENSCAFG00000013445	LSG1	99	84.800	Canis_familiaris
ENSCANG00000030709	LSG1	99	83.207	ENSCAFG00020002216	LSG1	99	84.591	Canis_lupus_dingo
ENSCANG00000030709	LSG1	99	84.043	ENSCHIG00000015769	LSG1	99	84.043	Capra_hircus
ENSCANG00000030709	LSG1	100	89.074	ENSTSYG00000001447	LSG1	100	89.074	Carlito_syrichta
ENSCANG00000030709	LSG1	95	77.548	ENSCAPG00000009856	LSG1	100	77.280	Cavia_aperea
ENSCANG00000030709	LSG1	100	92.705	ENSCCAG00000035744	LSG1	100	92.705	Cebus_capucinus
ENSCANG00000030709	LSG1	100	97.568	ENSCATG00000042060	LSG1	100	97.546	Cercocebus_atys
ENSCANG00000030709	LSG1	100	98.176	ENSCSAG00000008796	LSG1	92	98.176	Chlorocebus_sabaeus
ENSCANG00000030709	LSG1	99	68.713	ENSCPBG00000015941	LSG1	83	69.311	Chrysemys_picta_bellii
ENSCANG00000030709	LSG1	66	62.632	ENSCING00000007079	-	91	62.632	Ciona_intestinalis
ENSCANG00000030709	LSG1	75	56.198	ENSCSAVG00000002514	-	96	56.198	Ciona_savignyi
ENSCANG00000030709	LSG1	100	82.576	ENSCGRG00001019846	Lsg1	100	82.727	Cricetulus_griseus_chok1gshd
ENSCANG00000030709	LSG1	100	82.576	ENSCGRG00000014617	Lsg1	100	82.727	Cricetulus_griseus_crigri
ENSCANG00000030709	LSG1	98	63.859	ENSCSEG00000008522	lsg1	99	63.063	Cynoglossus_semilaevis
ENSCANG00000030709	LSG1	97	66.252	ENSCVAG00000002484	lsg1	99	66.616	Cyprinodon_variegatus
ENSCANG00000030709	LSG1	99	67.477	ENSDARG00000015352	lsg1	99	67.629	Danio_rerio
ENSCANG00000030709	LSG1	100	85.196	ENSDNOG00000006224	LSG1	100	84.894	Dasypus_novemcinctus
ENSCANG00000030709	LSG1	84	57.851	FBgn0266284	Ns3	91	57.851	Drosophila_melanogaster
ENSCANG00000030709	LSG1	89	84.000	ENSETEG00000003888	LSG1	89	84.000	Echinops_telfairi
ENSCANG00000030709	LSG1	88	57.286	ENSEBUG00000003119	lsg1	85	56.271	Eptatretus_burgeri
ENSCANG00000030709	LSG1	100	86.191	ENSEASG00005000678	LSG1	100	86.191	Equus_asinus_asinus
ENSCANG00000030709	LSG1	100	86.495	ENSECAG00000017659	LSG1	100	86.495	Equus_caballus
ENSCANG00000030709	LSG1	87	83.621	ENSEEUG00000015217	LSG1	87	83.621	Erinaceus_europaeus
ENSCANG00000030709	LSG1	99	62.991	ENSELUG00000023973	lsg1	99	62.387	Esox_lucius
ENSCANG00000030709	LSG1	99	85.562	ENSFCAG00000024957	LSG1	99	85.562	Felis_catus
ENSCANG00000030709	LSG1	92	66.232	ENSFALG00000007210	LSG1	94	66.232	Ficedula_albicollis
ENSCANG00000030709	LSG1	100	78.875	ENSFDAG00000017373	LSG1	100	79.211	Fukomys_damarensis
ENSCANG00000030709	LSG1	97	63.636	ENSFHEG00000003680	lsg1	99	64.328	Fundulus_heteroclitus
ENSCANG00000030709	LSG1	81	71.915	ENSGMOG00000015834	lsg1	87	70.683	Gadus_morhua
ENSCANG00000030709	LSG1	99	64.297	ENSGALG00000007058	LSG1	87	62.913	Gallus_gallus
ENSCANG00000030709	LSG1	97	65.991	ENSGAFG00000015831	lsg1	99	64.759	Gambusia_affinis
ENSCANG00000030709	LSG1	98	63.150	ENSGACG00000009323	lsg1	99	62.239	Gasterosteus_aculeatus
ENSCANG00000030709	LSG1	100	96.201	ENSGGOG00000000520	LSG1	100	96.201	Gorilla_gorilla
ENSCANG00000030709	LSG1	99	62.896	ENSHBUG00000005659	lsg1	99	63.830	Haplochromis_burtoni
ENSCANG00000030709	LSG1	100	76.772	ENSHGLG00000017390	LSG1	100	76.506	Heterocephalus_glaber_female
ENSCANG00000030709	LSG1	100	76.772	ENSHGLG00100018587	LSG1	100	76.506	Heterocephalus_glaber_male
ENSCANG00000030709	LSG1	97	63.988	ENSHCOG00000016848	lsg1	99	62.444	Hippocampus_comes
ENSCANG00000030709	LSG1	99	65.106	ENSIPUG00000008631	lsg1	99	65.008	Ictalurus_punctatus
ENSCANG00000030709	LSG1	82	79.242	ENSSTOG00000010234	LSG1	99	81.038	Ictidomys_tridecemlineatus
ENSCANG00000030709	LSG1	100	80.816	ENSJJAG00000015513	Lsg1	100	80.816	Jaculus_jaculus
ENSCANG00000030709	LSG1	98	63.256	ENSKMAG00000009681	lsg1	99	62.766	Kryptolebias_marmoratus
ENSCANG00000030709	LSG1	98	62.422	ENSLBEG00000024261	lsg1	99	62.861	Labrus_bergylta
ENSCANG00000030709	LSG1	99	65.309	ENSLACG00000013399	LSG1	99	65.309	Latimeria_chalumnae
ENSCANG00000030709	LSG1	98	65.581	ENSLOCG00000004918	lsg1	99	66.061	Lepisosteus_oculatus
ENSCANG00000030709	LSG1	100	83.612	ENSLAFG00000012919	-	100	83.612	Loxodonta_africana
ENSCANG00000030709	LSG1	100	97.872	ENSMFAG00000039903	LSG1	100	97.853	Macaca_fascicularis
ENSCANG00000030709	LSG1	100	98.024	ENSMMUG00000010708	LSG1	100	98.024	Macaca_mulatta
ENSCANG00000030709	LSG1	100	97.720	ENSMNEG00000031538	LSG1	100	97.546	Macaca_nemestrina
ENSCANG00000030709	LSG1	100	97.720	ENSMLEG00000041184	LSG1	100	97.720	Mandrillus_leucophaeus
ENSCANG00000030709	LSG1	99	62.576	ENSMAMG00000000470	lsg1	99	62.121	Mastacembelus_armatus
ENSCANG00000030709	LSG1	99	63.636	ENSMZEG00005017865	lsg1	99	64.134	Maylandia_zebra
ENSCANG00000030709	LSG1	89	66.099	ENSMGAG00000007050	LSG1	99	65.417	Meleagris_gallopavo
ENSCANG00000030709	LSG1	91	80.265	ENSMAUG00000016976	Lsg1	93	80.929	Mesocricetus_auratus
ENSCANG00000030709	LSG1	100	86.646	ENSMICG00000049087	LSG1	100	86.646	Microcebus_murinus
ENSCANG00000030709	LSG1	100	80.816	ENSMOCG00000022136	Lsg1	100	80.514	Microtus_ochrogaster
ENSCANG00000030709	LSG1	81	74.348	ENSMMOG00000008884	lsg1	99	68.485	Mola_mola
ENSCANG00000030709	LSG1	99	59.002	ENSMODG00000019828	LSG1	99	58.036	Monodelphis_domestica
ENSCANG00000030709	LSG1	100	81.611	MGP_CAROLIEiJ_G0020648	Lsg1	100	81.791	Mus_caroli
ENSCANG00000030709	LSG1	100	81.763	ENSMUSG00000022538	Lsg1	100	81.942	Mus_musculus
ENSCANG00000030709	LSG1	98	82.253	MGP_PahariEiJ_G0016352	Lsg1	100	82.121	Mus_pahari
ENSCANG00000030709	LSG1	100	81.763	MGP_SPRETEiJ_G0021544	Lsg1	100	81.942	Mus_spretus
ENSCANG00000030709	LSG1	99	83.891	ENSMPUG00000003734	LSG1	99	83.891	Mustela_putorius_furo
ENSCANG00000030709	LSG1	99	85.584	ENSMLUG00000012548	LSG1	99	85.584	Myotis_lucifugus
ENSCANG00000030709	LSG1	100	81.639	ENSNGAG00000021872	Lsg1	100	80.121	Nannospalax_galili
ENSCANG00000030709	LSG1	100	96.353	ENSNLEG00000008293	LSG1	100	96.353	Nomascus_leucogenys
ENSCANG00000030709	LSG1	69	69.944	ENSMEUG00000009041	-	82	69.883	Notamacropus_eugenii
ENSCANG00000030709	LSG1	99	62.952	ENSONIG00000002635	lsg1	99	63.994	Oreochromis_niloticus
ENSCANG00000030709	LSG1	95	72.611	ENSOANG00000012742	LSG1	99	71.656	Ornithorhynchus_anatinus
ENSCANG00000030709	LSG1	100	86.191	ENSOCUG00000004817	LSG1	100	86.191	Oryctolagus_cuniculus
ENSCANG00000030709	LSG1	98	63.509	ENSORLG00000007695	lsg1	99	63.166	Oryzias_latipes
ENSCANG00000030709	LSG1	98	63.043	ENSORLG00020016286	lsg1	99	62.100	Oryzias_latipes_hni
ENSCANG00000030709	LSG1	98	62.888	ENSORLG00015012025	lsg1	99	62.861	Oryzias_latipes_hsok
ENSCANG00000030709	LSG1	98	62.016	ENSOMEG00000022379	lsg1	99	61.854	Oryzias_melastigma
ENSCANG00000030709	LSG1	100	86.707	ENSOGAG00000003475	LSG1	100	86.707	Otolemur_garnettii
ENSCANG00000030709	LSG1	99	83.915	ENSOARG00000020403	LSG1	99	83.308	Ovis_aries
ENSCANG00000030709	LSG1	100	95.593	ENSPPAG00000029271	LSG1	100	95.593	Pan_paniscus
ENSCANG00000030709	LSG1	99	85.113	ENSPPRG00000010281	LSG1	99	85.113	Panthera_pardus
ENSCANG00000030709	LSG1	99	85.866	ENSPTIG00000010789	LSG1	99	85.866	Panthera_tigris_altaica
ENSCANG00000030709	LSG1	100	95.593	ENSPTRG00000015760	LSG1	100	95.593	Pan_troglodytes
ENSCANG00000030709	LSG1	100	97.568	ENSPANG00000018249	LSG1	100	97.546	Papio_anubis
ENSCANG00000030709	LSG1	100	63.609	ENSPKIG00000002895	lsg1	100	64.608	Paramormyrops_kingsleyae
ENSCANG00000030709	LSG1	96	65.474	ENSPSIG00000009821	LSG1	99	64.852	Pelodiscus_sinensis
ENSCANG00000030709	LSG1	95	65.127	ENSPMGG00000000931	lsg1	99	64.297	Periophthalmus_magnuspinnatus
ENSCANG00000030709	LSG1	100	82.175	ENSPEMG00000012082	-	100	81.873	Peromyscus_maniculatus_bairdii
ENSCANG00000030709	LSG1	99	60.793	ENSPMAG00000007451	lsg1	99	60.499	Petromyzon_marinus
ENSCANG00000030709	LSG1	99	67.188	ENSPCIG00000013890	LSG1	82	67.188	Phascolarctos_cinereus
ENSCANG00000030709	LSG1	97	66.047	ENSPFOG00000021882	lsg1	99	65.865	Poecilia_formosa
ENSCANG00000030709	LSG1	97	64.806	ENSPLAG00000019536	lsg1	99	65.263	Poecilia_latipinna
ENSCANG00000030709	LSG1	97	65.224	ENSPMEG00000017281	lsg1	99	65.067	Poecilia_mexicana
ENSCANG00000030709	LSG1	97	55.436	ENSPREG00000006048	lsg1	99	55.687	Poecilia_reticulata
ENSCANG00000030709	LSG1	92	95.058	ENSPPYG00000014425	LSG1	100	94.069	Pongo_abelii
ENSCANG00000030709	LSG1	91	88.000	ENSPCAG00000005511	LSG1	90	88.000	Procavia_capensis
ENSCANG00000030709	LSG1	100	88.164	ENSPCOG00000012360	LSG1	100	88.164	Propithecus_coquereli
ENSCANG00000030709	LSG1	99	62.669	ENSPNYG00000021994	lsg1	99	63.595	Pundamilia_nyererei
ENSCANG00000030709	LSG1	99	65.663	ENSPNAG00000015533	lsg1	99	65.402	Pygocentrus_nattereri
ENSCANG00000030709	LSG1	100	82.202	ENSRNOG00000001727	Lsg1	100	82.202	Rattus_norvegicus
ENSCANG00000030709	LSG1	100	97.416	ENSRBIG00000029053	LSG1	100	97.416	Rhinopithecus_bieti
ENSCANG00000030709	LSG1	100	97.416	ENSRROG00000037702	LSG1	100	97.416	Rhinopithecus_roxellana
ENSCANG00000030709	LSG1	66	58.084	YGL099W	LSG1	68	58.084	Saccharomyces_cerevisiae
ENSCANG00000030709	LSG1	100	94.073	ENSSBOG00000034938	LSG1	100	94.073	Saimiri_boliviensis_boliviensis
ENSCANG00000030709	LSG1	79	66.920	ENSSHAG00000003487	LSG1	99	65.974	Sarcophilus_harrisii
ENSCANG00000030709	LSG1	98	65.533	ENSSFOG00015008955	lsg1	99	64.545	Scleropages_formosus
ENSCANG00000030709	LSG1	98	64.253	ENSSDUG00000004622	lsg1	99	63.609	Seriola_dumerili
ENSCANG00000030709	LSG1	98	64.130	ENSSLDG00000010869	lsg1	99	63.623	Seriola_lalandi_dorsalis
ENSCANG00000030709	LSG1	81	84.706	ENSSARG00000012981	LSG1	81	84.706	Sorex_araneus
ENSCANG00000030709	LSG1	99	67.068	ENSSPUG00000016347	LSG1	99	66.667	Sphenodon_punctatus
ENSCANG00000030709	LSG1	99	62.727	ENSSPAG00000005508	lsg1	99	63.333	Stegastes_partitus
ENSCANG00000030709	LSG1	99	84.043	ENSSSCG00000011827	LSG1	99	83.283	Sus_scrofa
ENSCANG00000030709	LSG1	89	64.538	ENSTGUG00000009068	LSG1	99	64.034	Taeniopygia_guttata
ENSCANG00000030709	LSG1	97	61.310	ENSTRUG00000017380	lsg1	99	59.909	Takifugu_rubripes
ENSCANG00000030709	LSG1	97	64.969	ENSTNIG00000015570	lsg1	99	64.157	Tetraodon_nigroviridis
ENSCANG00000030709	LSG1	99	77.086	ENSTTRG00000000559	LSG1	99	76.176	Tursiops_truncatus
ENSCANG00000030709	LSG1	99	83.739	ENSUAMG00000012454	LSG1	99	83.739	Ursus_americanus
ENSCANG00000030709	LSG1	99	83.739	ENSUMAG00000000855	LSG1	99	83.739	Ursus_maritimus
ENSCANG00000030709	LSG1	95	80.800	ENSVPAG00000012400	LSG1	99	80.800	Vicugna_pacos
ENSCANG00000030709	LSG1	95	84.000	ENSVVUG00000008956	LSG1	97	84.000	Vulpes_vulpes
ENSCANG00000030709	LSG1	99	65.714	ENSXETG00000003451	lsg1	99	65.745	Xenopus_tropicalis
ENSCANG00000030709	LSG1	97	64.823	ENSXCOG00000003239	lsg1	99	64.565	Xiphophorus_couchianus
ENSCANG00000030709	LSG1	97	64.953	ENSXMAG00000005536	lsg1	99	64.412	Xiphophorus_maculatus