EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCANG00000030726 (Gene tree)
Gene ID: 105523150
Gene Symbol: APEX1
Alias: APE|APE-1|APEN|APEX|APX|HAP1|REF-1|REF1
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Minus strand
Length: 2576 bases
Position: chrKN983215.1:364930-367505
Accession: 105523150
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000014558	Exo_endo_phos	PF03372.23	9.1e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000037492	APEX1-202	45	-	ENSCANP00000014563	14 (aa)	-	A0A2K5ID19
ENSCANT00000037487	APEX1-201	1552	XM_011957913	ENSCANP00000014558	318 (aa)	XP_011813303	A0A2K5ID16

Gene Model

Click here to download ENSCANG00000030726's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000030726's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000030726	APEX1	100	98.428	ENSG00000100823	APEX1	100	98.428	Homo_sapiens
ENSCANG00000030726	APEX1	88	69.534	ENSAPOG00000017002	apex1	98	66.667	Acanthochromis_polyacanthus
ENSCANG00000030726	APEX1	100	95.597	ENSAMEG00000005418	APEX1	100	95.597	Ailuropoda_melanoleuca
ENSCANG00000030726	APEX1	87	71.223	ENSACIG00000010653	apex1	97	70.242	Amphilophus_citrinellus
ENSCANG00000030726	APEX1	88	69.534	ENSAOCG00000009649	apex1	99	65.815	Amphiprion_ocellaris
ENSCANG00000030726	APEX1	88	69.534	ENSAPEG00000021453	apex1	99	65.815	Amphiprion_percula
ENSCANG00000030726	APEX1	99	66.667	ENSATEG00000002883	apex1	97	66.667	Anabas_testudineus
ENSCANG00000030726	APEX1	100	70.186	ENSACAG00000008099	APEX1	100	70.186	Anolis_carolinensis
ENSCANG00000030726	APEX1	100	97.799	ENSANAG00000030117	APEX1	100	97.799	Aotus_nancymaae
ENSCANG00000030726	APEX1	86	72.000	ENSACLG00000018441	apex1	99	66.772	Astatotilapia_calliptera
ENSCANG00000030726	APEX1	100	65.312	ENSAMXG00000034699	apex1	100	65.312	Astyanax_mexicanus
ENSCANG00000030726	APEX1	100	93.396	ENSBTAG00000002745	APEX1	100	93.396	Bos_taurus
ENSCANG00000030726	APEX1	80	44.922	WBGene00001372	exo-3	88	44.922	Caenorhabditis_elegans
ENSCANG00000030726	APEX1	100	98.113	ENSCJAG00000009726	APEX1	100	98.113	Callithrix_jacchus
ENSCANG00000030726	APEX1	100	94.969	ENSCAFG00000032033	APEX1	100	94.969	Canis_familiaris
ENSCANG00000030726	APEX1	54	91.279	ENSCAFG00020023002	-	96	91.279	Canis_lupus_dingo
ENSCANG00000030726	APEX1	100	94.969	ENSCAFG00020014377	-	100	94.969	Canis_lupus_dingo
ENSCANG00000030726	APEX1	100	92.767	ENSCHIG00000007298	-	100	92.767	Capra_hircus
ENSCANG00000030726	APEX1	98	74.359	ENSCHIG00000014537	-	99	74.359	Capra_hircus
ENSCANG00000030726	APEX1	100	94.340	ENSTSYG00000034813	APEX1	100	94.340	Carlito_syrichta
ENSCANG00000030726	APEX1	85	88.561	ENSCAPG00000016235	APEX1	91	97.458	Cavia_aperea
ENSCANG00000030726	APEX1	100	94.340	ENSCPOG00000030909	APEX1	100	94.340	Cavia_porcellus
ENSCANG00000030726	APEX1	100	98.113	ENSCCAG00000033056	-	100	98.113	Cebus_capucinus
ENSCANG00000030726	APEX1	100	84.906	ENSCCAG00000031931	-	100	84.906	Cebus_capucinus
ENSCANG00000030726	APEX1	100	99.371	ENSCATG00000015580	APEX1	100	99.371	Cercocebus_atys
ENSCANG00000030726	APEX1	100	95.283	ENSCLAG00000001002	APEX1	100	95.283	Chinchilla_lanigera
ENSCANG00000030726	APEX1	100	99.057	ENSCSAG00000016685	-	100	99.057	Chlorocebus_sabaeus
ENSCANG00000030726	APEX1	100	99.057	ENSCSAG00000016670	-	100	99.057	Chlorocebus_sabaeus
ENSCANG00000030726	APEX1	100	72.414	ENSCPBG00000009567	APEX1	100	72.414	Chrysemys_picta_bellii
ENSCANG00000030726	APEX1	91	54.576	ENSCING00000008137	-	94	54.576	Ciona_intestinalis
ENSCANG00000030726	APEX1	83	51.698	ENSCSAVG00000007144	-	100	52.510	Ciona_savignyi
ENSCANG00000030726	APEX1	100	92.453	ENSCGRG00001017046	Apex1	100	92.453	Cricetulus_griseus_chok1gshd
ENSCANG00000030726	APEX1	100	92.453	ENSCGRG00000008984	Apex1	100	92.453	Cricetulus_griseus_crigri
ENSCANG00000030726	APEX1	99	65.094	ENSCSEG00000017499	apex1	99	65.094	Cynoglossus_semilaevis
ENSCANG00000030726	APEX1	99	66.139	ENSCVAG00000022075	apex1	99	66.139	Cyprinodon_variegatus
ENSCANG00000030726	APEX1	100	66.038	ENSDARG00000045843	apex1	100	66.038	Danio_rerio
ENSCANG00000030726	APEX1	100	89.308	ENSDNOG00000042234	APEX1	95	89.308	Dasypus_novemcinctus
ENSCANG00000030726	APEX1	100	94.025	ENSDORG00000001616	Apex1	100	94.025	Dipodomys_ordii
ENSCANG00000030726	APEX1	100	93.396	ENSETEG00000004855	-	100	93.396	Echinops_telfairi
ENSCANG00000030726	APEX1	75	64.854	ENSEBUG00000000622	-	92	64.854	Eptatretus_burgeri
ENSCANG00000030726	APEX1	100	95.912	ENSEASG00005017489	APEX1	74	95.912	Equus_asinus_asinus
ENSCANG00000030726	APEX1	100	95.912	ENSECAG00000022325	APEX1	82	95.912	Equus_caballus
ENSCANG00000030726	APEX1	91	93.750	ENSEEUG00000012569	APEX1	100	93.750	Erinaceus_europaeus
ENSCANG00000030726	APEX1	100	65.517	ENSELUG00000021706	apex1	100	65.517	Esox_lucius
ENSCANG00000030726	APEX1	100	96.226	ENSFCAG00000030869	APEX1	100	96.226	Felis_catus
ENSCANG00000030726	APEX1	100	93.396	ENSFDAG00000006120	APEX1	100	93.396	Fukomys_damarensis
ENSCANG00000030726	APEX1	99	67.722	ENSFHEG00000009031	apex1	83	67.722	Fundulus_heteroclitus
ENSCANG00000030726	APEX1	99	62.264	ENSGMOG00000007943	apex1	99	62.264	Gadus_morhua
ENSCANG00000030726	APEX1	99	67.405	ENSGAFG00000005311	apex1	99	67.405	Gambusia_affinis
ENSCANG00000030726	APEX1	88	69.176	ENSGACG00000019497	apex1	99	69.173	Gasterosteus_aculeatus
ENSCANG00000030726	APEX1	100	71.787	ENSGAGG00000014999	APEX1	100	71.787	Gopherus_agassizii
ENSCANG00000030726	APEX1	100	98.742	ENSGGOG00000002128	APEX1	100	98.742	Gorilla_gorilla
ENSCANG00000030726	APEX1	99	66.456	ENSHBUG00000005894	apex1	99	66.772	Haplochromis_burtoni
ENSCANG00000030726	APEX1	100	94.340	ENSHGLG00000002848	APEX1	100	94.340	Heterocephalus_glaber_female
ENSCANG00000030726	APEX1	100	94.340	ENSHGLG00100017878	APEX1	100	94.340	Heterocephalus_glaber_male
ENSCANG00000030726	APEX1	99	66.144	ENSHCOG00000009961	apex1	99	66.144	Hippocampus_comes
ENSCANG00000030726	APEX1	100	67.398	ENSIPUG00000005799	apex1	100	67.398	Ictalurus_punctatus
ENSCANG00000030726	APEX1	100	93.711	ENSSTOG00000010096	APEX1	100	93.711	Ictidomys_tridecemlineatus
ENSCANG00000030726	APEX1	100	80.189	ENSJJAG00000020465	-	96	84.228	Jaculus_jaculus
ENSCANG00000030726	APEX1	100	83.962	ENSJJAG00000003660	-	100	83.962	Jaculus_jaculus
ENSCANG00000030726	APEX1	100	93.711	ENSJJAG00000012067	-	100	93.711	Jaculus_jaculus
ENSCANG00000030726	APEX1	99	66.456	ENSKMAG00000021171	apex1	99	66.456	Kryptolebias_marmoratus
ENSCANG00000030726	APEX1	98	64.537	ENSLBEG00000010248	apex1	99	64.537	Labrus_bergylta
ENSCANG00000030726	APEX1	100	67.601	ENSLACG00000008617	APEX1	100	67.601	Latimeria_chalumnae
ENSCANG00000030726	APEX1	100	66.981	ENSLOCG00000015516	apex1	99	66.981	Lepisosteus_oculatus
ENSCANG00000030726	APEX1	100	94.025	ENSLAFG00000021872	APEX1	100	94.025	Loxodonta_africana
ENSCANG00000030726	APEX1	100	98.742	ENSMFAG00000002565	APEX1	100	98.742	Macaca_fascicularis
ENSCANG00000030726	APEX1	100	99.057	ENSMMUG00000048039	APEX1	100	99.057	Macaca_mulatta
ENSCANG00000030726	APEX1	100	99.057	ENSMNEG00000036944	APEX1	100	99.057	Macaca_nemestrina
ENSCANG00000030726	APEX1	100	99.371	ENSMLEG00000042125	APEX1	100	99.371	Mandrillus_leucophaeus
ENSCANG00000030726	APEX1	99	66.772	ENSMAMG00000023526	apex1	99	66.772	Mastacembelus_armatus
ENSCANG00000030726	APEX1	86	72.000	ENSMZEG00005014187	apex1	99	66.772	Maylandia_zebra
ENSCANG00000030726	APEX1	100	93.396	ENSMAUG00000013994	Apex1	100	93.396	Mesocricetus_auratus
ENSCANG00000030726	APEX1	100	95.283	ENSMICG00000043554	APEX1	100	95.283	Microcebus_murinus
ENSCANG00000030726	APEX1	100	92.138	ENSMOCG00000013721	Apex1	100	92.138	Microtus_ochrogaster
ENSCANG00000030726	APEX1	88	67.500	ENSMMOG00000010031	apex1	97	63.323	Mola_mola
ENSCANG00000030726	APEX1	100	83.438	ENSMODG00000007125	APEX1	100	84.472	Monodelphis_domestica
ENSCANG00000030726	APEX1	88	64.158	ENSMALG00000011699	apex1	79	62.799	Monopterus_albus
ENSCANG00000030726	APEX1	99	94.006	MGP_CAROLIEiJ_G0019209	Apex1	99	94.006	Mus_caroli
ENSCANG00000030726	APEX1	100	94.654	ENSMUSG00000035960	Apex1	100	94.654	Mus_musculus
ENSCANG00000030726	APEX1	100	94.654	MGP_PahariEiJ_G0030232	Apex1	100	94.654	Mus_pahari
ENSCANG00000030726	APEX1	100	94.654	MGP_SPRETEiJ_G0020101	Apex1	100	94.654	Mus_spretus
ENSCANG00000030726	APEX1	100	94.062	ENSMLUG00000028957	APEX1	100	94.062	Myotis_lucifugus
ENSCANG00000030726	APEX1	100	70.126	ENSNGAG00000021748	-	99	70.126	Nannospalax_galili
ENSCANG00000030726	APEX1	100	93.082	ENSNGAG00000002725	-	100	93.082	Nannospalax_galili
ENSCANG00000030726	APEX1	86	71.636	ENSNBRG00000005334	apex1	91	66.456	Neolamprologus_brichardi
ENSCANG00000030726	APEX1	100	98.428	ENSNLEG00000010839	APEX1	100	98.428	Nomascus_leucogenys
ENSCANG00000030726	APEX1	100	87.107	ENSMEUG00000014519	APEX1	100	87.107	Notamacropus_eugenii
ENSCANG00000030726	APEX1	100	93.082	ENSOPRG00000014029	APEX1	100	93.082	Ochotona_princeps
ENSCANG00000030726	APEX1	100	94.654	ENSODEG00000001703	-	100	94.654	Octodon_degus
ENSCANG00000030726	APEX1	100	72.222	ENSODEG00000006583	-	100	72.222	Octodon_degus
ENSCANG00000030726	APEX1	97	75.081	ENSODEG00000004777	-	99	75.081	Octodon_degus
ENSCANG00000030726	APEX1	87	71.942	ENSONIG00000012089	apex1	99	67.089	Oreochromis_niloticus
ENSCANG00000030726	APEX1	90	82.456	ENSOANG00000008836	APEX1	80	78.704	Ornithorhynchus_anatinus
ENSCANG00000030726	APEX1	100	94.654	ENSOCUG00000005022	APEX1	100	94.654	Oryctolagus_cuniculus
ENSCANG00000030726	APEX1	99	66.667	ENSORLG00000012378	apex1	99	66.667	Oryzias_latipes
ENSCANG00000030726	APEX1	99	66.667	ENSORLG00020021371	apex1	99	66.667	Oryzias_latipes_hni
ENSCANG00000030726	APEX1	99	66.667	ENSORLG00015020089	apex1	99	66.667	Oryzias_latipes_hsok
ENSCANG00000030726	APEX1	99	66.667	ENSOMEG00000018876	apex1	99	66.667	Oryzias_melastigma
ENSCANG00000030726	APEX1	100	94.654	ENSOGAG00000013335	-	100	94.654	Otolemur_garnettii
ENSCANG00000030726	APEX1	98	83.974	ENSOGAG00000029355	-	100	83.974	Otolemur_garnettii
ENSCANG00000030726	APEX1	97	88.961	ENSOARG00000001876	-	100	88.961	Ovis_aries
ENSCANG00000030726	APEX1	99	77.848	ENSOARG00000014424	-	100	77.848	Ovis_aries
ENSCANG00000030726	APEX1	100	91.824	ENSOARG00000019740	-	100	91.824	Ovis_aries
ENSCANG00000030726	APEX1	100	98.742	ENSPPAG00000038760	APEX1	100	98.742	Pan_paniscus
ENSCANG00000030726	APEX1	100	96.541	ENSPPRG00000011794	APEX1	100	96.541	Panthera_pardus
ENSCANG00000030726	APEX1	100	96.226	ENSPTIG00000014829	APEX1	100	96.226	Panthera_tigris_altaica
ENSCANG00000030726	APEX1	100	98.742	ENSPTRG00000006093	APEX1	100	98.742	Pan_troglodytes
ENSCANG00000030726	APEX1	100	99.371	ENSPANG00000022757	APEX1	100	99.371	Papio_anubis
ENSCANG00000030726	APEX1	87	68.592	ENSPKIG00000003504	apex1	100	64.798	Paramormyrops_kingsleyae
ENSCANG00000030726	APEX1	76	66.667	ENSPMGG00000016596	apex1	73	66.667	Periophthalmus_magnuspinnatus
ENSCANG00000030726	APEX1	100	94.025	ENSPEMG00000019097	Apex1	100	94.025	Peromyscus_maniculatus_bairdii
ENSCANG00000030726	APEX1	94	66.445	ENSPMAG00000007275	-	100	66.445	Petromyzon_marinus
ENSCANG00000030726	APEX1	100	84.013	ENSPCIG00000023274	APEX1	100	84.424	Phascolarctos_cinereus
ENSCANG00000030726	APEX1	99	67.405	ENSPFOG00000004178	apex1	99	67.405	Poecilia_formosa
ENSCANG00000030726	APEX1	99	67.089	ENSPLAG00000012779	apex1	99	67.089	Poecilia_latipinna
ENSCANG00000030726	APEX1	99	67.405	ENSPMEG00000019623	apex1	99	67.405	Poecilia_mexicana
ENSCANG00000030726	APEX1	99	66.772	ENSPREG00000014298	apex1	99	66.772	Poecilia_reticulata
ENSCANG00000030726	APEX1	100	98.113	ENSPPYG00000005565	APEX1	100	98.113	Pongo_abelii
ENSCANG00000030726	APEX1	100	92.138	ENSPCAG00000010376	APEX1	100	92.138	Procavia_capensis
ENSCANG00000030726	APEX1	100	95.283	ENSPCOG00000021564	APEX1	100	95.283	Propithecus_coquereli
ENSCANG00000030726	APEX1	100	95.000	ENSPVAG00000010736	APEX1	100	95.000	Pteropus_vampyrus
ENSCANG00000030726	APEX1	86	72.000	ENSPNYG00000023940	apex1	99	66.772	Pundamilia_nyererei
ENSCANG00000030726	APEX1	93	65.203	ENSPNAG00000020897	apex1	96	65.085	Pygocentrus_nattereri
ENSCANG00000030726	APEX1	100	93.711	ENSRNOG00000009663	Apex1	100	93.711	Rattus_norvegicus
ENSCANG00000030726	APEX1	100	99.371	ENSRBIG00000038325	APEX1	99	99.371	Rhinopithecus_bieti
ENSCANG00000030726	APEX1	100	97.799	ENSSBOG00000018921	-	100	97.799	Saimiri_boliviensis_boliviensis
ENSCANG00000030726	APEX1	100	83.019	ENSSBOG00000031372	-	100	83.019	Saimiri_boliviensis_boliviensis
ENSCANG00000030726	APEX1	100	83.951	ENSSHAG00000013524	APEX1	100	84.969	Sarcophilus_harrisii
ENSCANG00000030726	APEX1	87	66.426	ENSSFOG00015001948	apex1	100	62.579	Scleropages_formosus
ENSCANG00000030726	APEX1	87	69.424	ENSSMAG00000013348	apex1	99	65.615	Scophthalmus_maximus
ENSCANG00000030726	APEX1	99	65.506	ENSSDUG00000016377	apex1	99	65.506	Seriola_dumerili
ENSCANG00000030726	APEX1	99	66.139	ENSSLDG00000023005	apex1	99	66.139	Seriola_lalandi_dorsalis
ENSCANG00000030726	APEX1	93	71.525	ENSSPUG00000000531	APEX1	99	71.525	Sphenodon_punctatus
ENSCANG00000030726	APEX1	88	69.892	ENSSPAG00000000458	apex1	96	67.918	Stegastes_partitus
ENSCANG00000030726	APEX1	100	94.340	ENSSSCG00000040060	-	100	94.340	Sus_scrofa
ENSCANG00000030726	APEX1	96	56.452	ENSSSCG00000039705	-	99	58.278	Sus_scrofa
ENSCANG00000030726	APEX1	74	60.593	ENSTGUG00000014378	APEX1	100	60.593	Taeniopygia_guttata
ENSCANG00000030726	APEX1	87	67.986	ENSTRUG00000004268	apex1	95	64.241	Takifugu_rubripes
ENSCANG00000030726	APEX1	99	63.924	ENSTNIG00000005778	apex1	99	63.924	Tetraodon_nigroviridis
ENSCANG00000030726	APEX1	100	91.509	ENSTBEG00000006405	APEX1	100	91.509	Tupaia_belangeri
ENSCANG00000030726	APEX1	74	95.339	ENSTTRG00000007860	APEX1	100	95.339	Tursiops_truncatus
ENSCANG00000030726	APEX1	100	95.283	ENSUAMG00000010457	APEX1	100	95.283	Ursus_americanus
ENSCANG00000030726	APEX1	100	95.283	ENSUMAG00000009178	APEX1	100	95.283	Ursus_maritimus
ENSCANG00000030726	APEX1	74	90.254	ENSVPAG00000005083	APEX1	100	90.254	Vicugna_pacos
ENSCANG00000030726	APEX1	100	94.654	ENSVVUG00000009010	APEX1	100	94.654	Vulpes_vulpes
ENSCANG00000030726	APEX1	100	64.396	ENSXETG00000024773	apex1	100	66.563	Xenopus_tropicalis
ENSCANG00000030726	APEX1	88	71.685	ENSXCOG00000015233	apex1	99	67.089	Xiphophorus_couchianus
ENSCANG00000030726	APEX1	88	71.685	ENSXMAG00000006195	apex1	99	67.089	Xiphophorus_maculatus