EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000030879 (Gene tree)
Gene ID: 105511971
Gene Symbol: -
Alias: -
Full Name: RAB%2C member of RAS oncogene family like 2B
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 15563 bases
Position: chrKN980585.1:54737-70299
Accession: 105511971
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000014876	MMR_HSR1	PF01926.23	9.4e-05	1	1
ENSCANP00000014856	MMR_HSR1	PF01926.23	9.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000037788	-	2232	XM_011942209	ENSCANP00000014856	228 (aa)	XP_011797599	A0A2K5IE71
ENSCANT00000037847	-	300	-	ENSCANP00000014915	99 (aa)	-	A0A2K5IE74
ENSCANT00000037808	-	2470	XM_011942210	ENSCANP00000014876	229 (aa)	XP_011797600	A0A2K5IE91
ENSCANT00000037843	-	498	-	ENSCANP00000014911	165 (aa)	-	A0A2K5IED0

Gene Model

Click here to download ENSCANG00000030879's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000030879's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000030879	-	69	36.145	ENSCANG00000041683	RAB7A	80	36.145
ENSCANG00000030879	-	72	34.706	ENSCANG00000039448	RAB14	77	34.706
ENSCANG00000030879	-	67	34.591	ENSCANG00000031453	RAB12	72	34.591
ENSCANG00000030879	-	71	33.908	ENSCANG00000017244	RAB9A	85	33.908
ENSCANG00000030879	-	65	35.294	ENSCANG00000035916	RAB1A	77	35.294
ENSCANG00000030879	-	89	30.000	ENSCANG00000029206	RAB2B	95	30.000
ENSCANG00000030879	-	63	38.255	ENSCANG00000035397	RAB18	70	38.889
ENSCANG00000030879	-	67	32.919	ENSCANG00000034492	RAB39B	75	32.919
ENSCANG00000030879	-	72	34.483	ENSCANG00000034858	RAB33B	64	36.735
ENSCANG00000030879	-	65	35.948	ENSCANG00000043514	RAB5A	71	35.948
ENSCANG00000030879	-	63	30.464	ENSCANG00000031708	MRAS	77	31.481
ENSCANG00000030879	-	87	34.928	ENSCANG00000041717	RAB33A	84	34.928
ENSCANG00000030879	-	73	30.114	ENSCANG00000012854	RAB9B	88	30.114
ENSCANG00000030879	-	65	37.419	ENSCANG00000042299	RAB1B	76	37.419
ENSCANG00000030879	-	67	36.943	ENSCANG00000040517	RAB11B	72	36.943
ENSCANG00000030879	-	65	30.128	ENSCANG00000033566	RAB34	60	30.128
ENSCANG00000030879	-	67	30.189	ENSCANG00000036573	-	78	30.189
ENSCANG00000030879	-	81	33.333	ENSCANG00000034570	-	81	33.333
ENSCANG00000030879	-	71	34.911	ENSCANG00000032052	RAB22A	86	34.911
ENSCANG00000030879	-	65	31.373	ENSCANG00000029838	RAB6B	74	31.373
ENSCANG00000030879	-	74	34.483	ENSCANG00000022240	RAB30	86	34.483
ENSCANG00000030879	-	65	32.667	ENSCANG00000004264	-	69	32.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000030879	-	100	93.886	ENSG00000079974	RABL2B	100	94.949	Homo_sapiens
ENSCANG00000030879	-	100	93.450	ENSG00000144134	RABL2A	100	94.737	Homo_sapiens
ENSCANG00000030879	-	96	72.273	ENSAPOG00000023708	rabl2	99	72.273	Acanthochromis_polyacanthus
ENSCANG00000030879	-	97	84.889	ENSAMEG00000003173	-	99	84.889	Ailuropoda_melanoleuca
ENSCANG00000030879	-	96	70.000	ENSACIG00000000670	rabl2	99	70.000	Amphilophus_citrinellus
ENSCANG00000030879	-	96	72.727	ENSAOCG00000008069	rabl2	99	72.727	Amphiprion_ocellaris
ENSCANG00000030879	-	96	71.818	ENSAPEG00000003164	rabl2	99	71.818	Amphiprion_percula
ENSCANG00000030879	-	96	72.727	ENSATEG00000001111	rabl2	99	72.727	Anabas_testudineus
ENSCANG00000030879	-	72	85.976	ENSACAG00000000418	-	93	85.976	Anolis_carolinensis
ENSCANG00000030879	-	100	91.266	ENSANAG00000021001	-	100	91.266	Aotus_nancymaae
ENSCANG00000030879	-	96	72.273	ENSACLG00000025632	rabl2	99	72.273	Astatotilapia_calliptera
ENSCANG00000030879	-	93	76.995	ENSAMXG00000040611	rabl2	96	76.995	Astyanax_mexicanus
ENSCANG00000030879	-	97	83.036	ENSBTAG00000004876	RABL2B	99	83.482	Bos_taurus
ENSCANG00000030879	-	100	91.703	ENSCJAG00000018414	-	100	91.703	Callithrix_jacchus
ENSCANG00000030879	-	97	88.235	ENSCAFG00020006938	-	99	88.235	Canis_lupus_dingo
ENSCANG00000030879	-	97	81.659	ENSCHIG00000000591	-	99	82.096	Capra_hircus
ENSCANG00000030879	-	100	87.773	ENSTSYG00000004323	-	100	87.773	Carlito_syrichta
ENSCANG00000030879	-	95	88.018	ENSCPOG00000026899	-	98	88.018	Cavia_porcellus
ENSCANG00000030879	-	100	92.576	ENSCCAG00000025944	-	100	92.576	Cebus_capucinus
ENSCANG00000030879	-	100	96.507	ENSCATG00000034307	-	100	96.507	Cercocebus_atys
ENSCANG00000030879	-	97	87.444	ENSCLAG00000017218	-	100	87.444	Chinchilla_lanigera
ENSCANG00000030879	-	100	96.970	ENSCSAG00000004698	-	100	96.970	Chlorocebus_sabaeus
ENSCANG00000030879	-	92	81.043	ENSCPBG00000011715	-	93	81.043	Chrysemys_picta_bellii
ENSCANG00000030879	-	81	65.591	ENSCING00000004961	-	87	65.591	Ciona_intestinalis
ENSCANG00000030879	-	79	68.333	ENSCSAVG00000006042	-	87	68.333	Ciona_savignyi
ENSCANG00000030879	-	97	86.425	ENSCGRG00001021894	Rabl2	99	86.425	Cricetulus_griseus_chok1gshd
ENSCANG00000030879	-	89	74.384	ENSCSEG00000005479	rabl2	97	72.811	Cynoglossus_semilaevis
ENSCANG00000030879	-	94	72.093	ENSCVAG00000011432	rabl2	98	72.093	Cyprinodon_variegatus
ENSCANG00000030879	-	94	73.953	ENSDARG00000063321	rabl2	97	73.953	Danio_rerio
ENSCANG00000030879	-	97	88.235	ENSDNOG00000035151	-	99	88.235	Dasypus_novemcinctus
ENSCANG00000030879	-	97	88.235	ENSDORG00000000003	Rabl2	99	88.235	Dipodomys_ordii
ENSCANG00000030879	-	97	87.783	ENSEASG00005008239	-	99	87.783	Equus_asinus_asinus
ENSCANG00000030879	-	97	87.330	ENSECAG00000026942	-	99	87.330	Equus_caballus
ENSCANG00000030879	-	97	88.235	ENSFCAG00000033642	-	99	88.235	Felis_catus
ENSCANG00000030879	-	100	84.716	ENSFDAG00000002113	-	100	84.716	Fukomys_damarensis
ENSCANG00000030879	-	99	69.912	ENSFHEG00000015015	rabl2	85	69.912	Fundulus_heteroclitus
ENSCANG00000030879	-	86	75.127	ENSGMOG00000018928	rabl2	100	75.127	Gadus_morhua
ENSCANG00000030879	-	96	75.455	ENSGALG00000032458	RABL2B	99	75.455	Gallus_gallus
ENSCANG00000030879	-	84	77.604	ENSGAFG00000005188	rabl2	96	72.897	Gambusia_affinis
ENSCANG00000030879	-	96	70.000	ENSGACG00000012474	rabl2	99	70.000	Gasterosteus_aculeatus
ENSCANG00000030879	-	96	72.273	ENSHBUG00000010964	rabl2	99	72.273	Haplochromis_burtoni
ENSCANG00000030879	-	97	87.330	ENSHGLG00000005750	-	99	87.330	Heterocephalus_glaber_female
ENSCANG00000030879	-	97	87.330	ENSHGLG00100016281	-	99	87.330	Heterocephalus_glaber_male
ENSCANG00000030879	-	97	90.498	ENSSTOG00000002723	-	99	90.498	Ictidomys_tridecemlineatus
ENSCANG00000030879	-	97	87.330	ENSJJAG00000010792	Rabl2	99	87.330	Jaculus_jaculus
ENSCANG00000030879	-	96	73.182	ENSKMAG00000012723	rabl2	99	73.182	Kryptolebias_marmoratus
ENSCANG00000030879	-	96	72.273	ENSLBEG00000003644	rabl2	99	72.273	Labrus_bergylta
ENSCANG00000030879	-	93	78.037	ENSLACG00000003722	rabl2	95	78.037	Latimeria_chalumnae
ENSCANG00000030879	-	95	76.498	ENSLOCG00000016767	rabl2	96	76.498	Lepisosteus_oculatus
ENSCANG00000030879	-	100	97.817	ENSMFAG00000044775	-	100	97.817	Macaca_fascicularis
ENSCANG00000030879	-	100	97.817	ENSMMUG00000022914	RABL2B	100	97.817	Macaca_mulatta
ENSCANG00000030879	-	100	97.368	ENSMNEG00000028460	-	100	97.368	Macaca_nemestrina
ENSCANG00000030879	-	100	96.930	ENSMLEG00000032621	-	100	96.930	Mandrillus_leucophaeus
ENSCANG00000030879	-	96	71.818	ENSMAMG00000008168	rabl2	99	71.818	Mastacembelus_armatus
ENSCANG00000030879	-	91	74.038	ENSMZEG00005019758	rabl2	96	74.038	Maylandia_zebra
ENSCANG00000030879	-	97	85.973	ENSMAUG00000010955	Rabl2	99	85.973	Mesocricetus_auratus
ENSCANG00000030879	-	100	90.830	ENSMICG00000031301	-	100	90.830	Microcebus_murinus
ENSCANG00000030879	-	97	85.520	ENSMOCG00000002775	Rabl2	99	85.909	Microtus_ochrogaster
ENSCANG00000030879	-	93	85.514	ENSMODG00000010838	-	95	85.514	Monodelphis_domestica
ENSCANG00000030879	-	96	71.364	ENSMALG00000005944	rabl2	99	71.364	Monopterus_albus
ENSCANG00000030879	-	97	83.258	MGP_CAROLIEiJ_G0020176	Rabl2	98	83.258	Mus_caroli
ENSCANG00000030879	-	97	83.258	ENSMUSG00000022621	Rabl2	99	83.258	Mus_musculus
ENSCANG00000030879	-	97	84.163	MGP_PahariEiJ_G0020181	Rabl2	99	84.163	Mus_pahari
ENSCANG00000030879	-	97	83.258	MGP_SPRETEiJ_G0021073	Rabl2	99	83.258	Mus_spretus
ENSCANG00000030879	-	97	86.878	ENSMPUG00000001806	-	99	86.878	Mustela_putorius_furo
ENSCANG00000030879	-	96	86.301	ENSNGAG00000012843	Rabl2	95	86.301	Nannospalax_galili
ENSCANG00000030879	-	96	72.273	ENSNBRG00000000489	rabl2	99	72.273	Neolamprologus_brichardi
ENSCANG00000030879	-	100	94.323	ENSNLEG00000030435	-	100	94.323	Nomascus_leucogenys
ENSCANG00000030879	-	97	87.783	ENSODEG00000015650	-	99	87.783	Octodon_degus
ENSCANG00000030879	-	100	69.697	ENSONIG00000014885	rabl2	99	72.727	Oreochromis_niloticus
ENSCANG00000030879	-	90	73.913	ENSORLG00000009874	rabl2	92	73.913	Oryzias_latipes
ENSCANG00000030879	-	90	73.913	ENSORLG00020001721	rabl2	92	73.913	Oryzias_latipes_hni
ENSCANG00000030879	-	90	73.913	ENSORLG00015014268	rabl2	92	73.913	Oryzias_latipes_hsok
ENSCANG00000030879	-	90	74.396	ENSOMEG00000008576	rabl2	95	74.396	Oryzias_melastigma
ENSCANG00000030879	-	100	89.520	ENSOGAG00000009123	-	100	89.520	Otolemur_garnettii
ENSCANG00000030879	-	95	88.128	ENSPPRG00000014642	-	96	88.128	Panthera_pardus
ENSCANG00000030879	-	97	88.235	ENSPTIG00000018747	-	99	88.235	Panthera_tigris_altaica
ENSCANG00000030879	-	100	90.756	ENSPTRG00000014555	-	100	90.756	Pan_troglodytes
ENSCANG00000030879	-	100	92.857	ENSPANG00000036121	-	100	92.857	Papio_anubis
ENSCANG00000030879	-	86	80.612	ENSPKIG00000025372	rabl2	88	80.612	Paramormyrops_kingsleyae
ENSCANG00000030879	-	92	81.517	ENSPSIG00000014041	-	93	81.517	Pelodiscus_sinensis
ENSCANG00000030879	-	86	74.619	ENSPMGG00000012946	rabl2	96	74.619	Periophthalmus_magnuspinnatus
ENSCANG00000030879	-	97	85.520	ENSPEMG00000024045	Rabl2	99	85.520	Peromyscus_maniculatus_bairdii
ENSCANG00000030879	-	96	82.727	ENSPCIG00000012436	-	89	82.727	Phascolarctos_cinereus
ENSCANG00000030879	-	91	74.882	ENSPFOG00000017960	rabl2	95	74.882	Poecilia_formosa
ENSCANG00000030879	-	91	75.598	ENSPLAG00000015685	rabl2	95	75.598	Poecilia_latipinna
ENSCANG00000030879	-	91	75.598	ENSPMEG00000004703	rabl2	95	75.598	Poecilia_mexicana
ENSCANG00000030879	-	82	78.191	ENSPREG00000014761	rabl2	93	78.075	Poecilia_reticulata
ENSCANG00000030879	-	100	93.013	ENSPPYG00000012000	-	100	93.013	Pongo_abelii
ENSCANG00000030879	-	100	90.393	ENSPCOG00000024865	-	100	90.393	Propithecus_coquereli
ENSCANG00000030879	-	99	82.278	ENSPVAG00000004539	-	100	82.278	Pteropus_vampyrus
ENSCANG00000030879	-	96	72.273	ENSPNYG00000004845	rabl2	99	72.273	Pundamilia_nyererei
ENSCANG00000030879	-	88	78.607	ENSPNAG00000024254	rabl2	100	74.107	Pygocentrus_nattereri
ENSCANG00000030879	-	97	85.520	ENSRNOG00000013947	Rabl2	88	85.520	Rattus_norvegicus
ENSCANG00000030879	-	100	97.380	ENSRBIG00000033607	-	100	97.380	Rhinopithecus_bieti
ENSCANG00000030879	-	100	98.253	ENSRROG00000031130	-	100	98.253	Rhinopithecus_roxellana
ENSCANG00000030879	-	100	92.576	ENSSBOG00000033266	-	100	92.576	Saimiri_boliviensis_boliviensis
ENSCANG00000030879	-	97	71.493	ENSSFOG00015020738	rabl2	98	73.853	Scleropages_formosus
ENSCANG00000030879	-	96	72.603	ENSSMAG00000004606	rabl2	98	72.603	Scophthalmus_maximus
ENSCANG00000030879	-	97	72.197	ENSSDUG00000014765	rabl2	100	72.197	Seriola_dumerili
ENSCANG00000030879	-	74	88.235	ENSSSCG00000025041	-	100	88.235	Sus_scrofa
ENSCANG00000030879	-	90	74.272	ENSTGUG00000016028	-	99	74.272	Taeniopygia_guttata
ENSCANG00000030879	-	96	71.818	ENSTRUG00000012454	rabl2	99	71.818	Takifugu_rubripes
ENSCANG00000030879	-	96	71.364	ENSTNIG00000017951	rabl2	99	71.364	Tetraodon_nigroviridis
ENSCANG00000030879	-	100	80.702	ENSUAMG00000015761	-	98	80.702	Ursus_americanus
ENSCANG00000030879	-	97	87.330	ENSUMAG00000017116	-	99	87.330	Ursus_maritimus
ENSCANG00000030879	-	97	87.330	ENSVVUG00000025761	-	99	87.330	Vulpes_vulpes
ENSCANG00000030879	-	100	74.026	ENSXETG00000015712	rabl2b	100	74.026	Xenopus_tropicalis
ENSCANG00000030879	-	93	74.299	ENSXMAG00000004569	rabl2	96	74.299	Xiphophorus_maculatus