EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCANG00000030911 (Gene tree)
Gene ID
105521940
Gene Symbol
RPA1
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A1
Gene Type
protein_coding
Species
Colobus_angolensis_palliatus
Status
putative
Strand
Plus strand
Length
57265 bases
Position
chrKN979497.1:1799802-1857066
Accession
105521940
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCANP00000014944tRNA_anti-codonPF01336.254.2e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCANT00000037866RPA1-2012791-ENSCANP00000014934268 (aa)-A0A2K5IE60
ENSCANT00000037876RPA1-2021725XM_011956307ENSCANP00000014944574 (aa)XP_011811697A0A2K5IE70
Gene Model
Click here to download ENSCANG00000030911's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000030911's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCANG00000030911RPA19963.621ENSAPOG00000011658rpa19966.011Acanthochromis_polyacanthus
ENSCANG00000030911RPA19363.387ENSAPOG00000019409RPA18063.387Acanthochromis_polyacanthus
ENSCANG00000030911RPA19985.265ENSAMEG00000007706RPA19885.265Ailuropoda_melanoleuca
ENSCANG00000030911RPA19757.266ENSACIG00000007277rpa19957.266Amphilophus_citrinellus
ENSCANG00000030911RPA19758.234ENSACIG00000012881RPA19958.234Amphilophus_citrinellus
ENSCANG00000030911RPA19964.237ENSAOCG00000023376rpa19966.132Amphiprion_ocellaris
ENSCANG00000030911RPA19463.348ENSAOCG00000009003RPA18663.348Amphiprion_ocellaris
ENSCANG00000030911RPA19464.027ENSAPEG00000019132RPA18464.027Amphiprion_percula
ENSCANG00000030911RPA19963.898ENSAPEG00000008634rpa19965.775Amphiprion_percula
ENSCANG00000030911RPA19866.359ENSATEG00000006443RPA18766.359Anabas_testudineus
ENSCANG00000030911RPA19665.432ENSATEG00000022024rpa19965.432Anabas_testudineus
ENSCANG00000030911RPA19962.963ENSAPLG00000012442RPA110062.963Anas_platyrhynchos
ENSCANG00000030911RPA19964.796ENSACAG00000014490RPA19864.796Anolis_carolinensis
ENSCANG00000030911RPA19995.105ENSANAG00000023456RPA110095.105Aotus_nancymaae
ENSCANG00000030911RPA19566.068ENSACLG00000006640rpa19966.068Astatotilapia_calliptera
ENSCANG00000030911RPA19856.844ENSACLG00000005223RPA19756.844Astatotilapia_calliptera
ENSCANG00000030911RPA19765.288ENSAMXG00000008418rpa19965.288Astyanax_mexicanus
ENSCANG00000030911RPA110087.107ENSBTAG00000009711RPA19887.107Bos_taurus
ENSCANG00000030911RPA18230.802WBGene00017546rpa-17130.802Caenorhabditis_elegans
ENSCANG00000030911RPA19989.735ENSCJAG00000001848RPA19889.735Callithrix_jacchus
ENSCANG00000030911RPA110085.289ENSCAFG00000019249RPA19885.289Canis_familiaris
ENSCANG00000030911RPA110085.289ENSCAFG00020009847RPA19885.289Canis_lupus_dingo
ENSCANG00000030911RPA110086.942ENSCHIG00000026308RPA19886.942Capra_hircus
ENSCANG00000030911RPA110088.119ENSTSYG00000003482-9888.119Carlito_syrichta
ENSCANG00000030911RPA110084.628ENSCPOG00000000035RPA19884.628Cavia_porcellus
ENSCANG00000030911RPA19978.347ENSCCAG00000010981RPA19878.347Cebus_capucinus
ENSCANG00000030911RPA110081.157ENSCLAG00000015045-9881.157Chinchilla_lanigera
ENSCANG00000030911RPA19986.070ENSCLAG00000005185-9886.070Chinchilla_lanigera
ENSCANG00000030911RPA110081.848ENSCSAG00000013833RPA19881.848Chlorocebus_sabaeus
ENSCANG00000030911RPA17691.572ENSCHOG00000009454-10091.572Choloepus_hoffmanni
ENSCANG00000030911RPA19783.673ENSCHOG00000013540-10083.673Choloepus_hoffmanni
ENSCANG00000030911RPA19974.419ENSCPBG00000020377RPA19974.648Chrysemys_picta_bellii
ENSCANG00000030911RPA19943.098ENSCING00000023482-9743.098Ciona_intestinalis
ENSCANG00000030911RPA19984.514ENSCGRG00001008197Rpa19884.514Cricetulus_griseus_chok1gshd
ENSCANG00000030911RPA18090.260ENSCGRG00000000582Rpa19090.260Cricetulus_griseus_crigri
ENSCANG00000030911RPA19851.809ENSCSEG00000012726RPA19952.740Cynoglossus_semilaevis
ENSCANG00000030911RPA19761.996ENSCSEG00000013066rpa19761.996Cynoglossus_semilaevis
ENSCANG00000030911RPA19565.037ENSCVAG00000013446-8765.037Cyprinodon_variegatus
ENSCANG00000030911RPA19962.963ENSCVAG00000019431rpa19965.530Cyprinodon_variegatus
ENSCANG00000030911RPA19963.007ENSDARG00000003938rpa19863.007Danio_rerio
ENSCANG00000030911RPA19986.401ENSDNOG00000017218RPA19886.401Dasypus_novemcinctus
ENSCANG00000030911RPA19985.904ENSDORG00000006199Rpa19885.904Dipodomys_ordii
ENSCANG00000030911RPA19842.882FBgn0010173RpA-709643.836Drosophila_melanogaster
ENSCANG00000030911RPA18182.292ENSETEG00000017608RPA18182.292Echinops_telfairi
ENSCANG00000030911RPA19991.259ENSEASG00005009372RPA110091.259Equus_asinus_asinus
ENSCANG00000030911RPA110086.281ENSECAG00000023886RPA19886.281Equus_caballus
ENSCANG00000030911RPA17389.286ENSEEUG00000002186-6889.286Erinaceus_europaeus
ENSCANG00000030911RPA19863.140ENSELUG00000021071rpa19663.311Esox_lucius
ENSCANG00000030911RPA18961.328ENSELUG00000006136RPA19961.328Esox_lucius
ENSCANG00000030911RPA110083.168ENSFCAG00000006306RPA19883.168Felis_catus
ENSCANG00000030911RPA110072.185ENSFALG00000006575RPA19872.185Ficedula_albicollis
ENSCANG00000030911RPA19985.572ENSFDAG00000007720RPA19885.572Fukomys_damarensis
ENSCANG00000030911RPA19762.436ENSFHEG00000003580rpa19662.436Fundulus_heteroclitus
ENSCANG00000030911RPA19864.107ENSGMOG00000010382rpa19664.107Gadus_morhua
ENSCANG00000030911RPA110072.968ENSGALG00000003072RPA19872.968Gallus_gallus
ENSCANG00000030911RPA19962.373ENSGAFG00000012916rpa19664.311Gambusia_affinis
ENSCANG00000030911RPA19763.535ENSGAFG00000020953RPA16863.535Gambusia_affinis
ENSCANG00000030911RPA19960.862ENSGACG00000010856rpa19860.862Gasterosteus_aculeatus
ENSCANG00000030911RPA19974.419ENSGAGG00000013611RPA19874.419Gopherus_agassizii
ENSCANG00000030911RPA110096.864ENSGGOG00000014186RPA19896.864Gorilla_gorilla
ENSCANG00000030911RPA19855.382ENSHBUG00000009348RPA19955.382Haplochromis_burtoni
ENSCANG00000030911RPA19765.554ENSHBUG00000017773rpa19565.554Haplochromis_burtoni
ENSCANG00000030911RPA19985.738ENSHGLG00000008846RPA19885.738Heterocephalus_glaber_female
ENSCANG00000030911RPA19985.738ENSHGLG00100017755-9885.738Heterocephalus_glaber_male
ENSCANG00000030911RPA110073.058ENSHGLG00100002005-9873.058Heterocephalus_glaber_male
ENSCANG00000030911RPA110081.157ENSHGLG00100000799-9881.157Heterocephalus_glaber_male
ENSCANG00000030911RPA19761.616ENSHCOG00000001401rpa19661.616Hippocampus_comes
ENSCANG00000030911RPA19947.260ENSHCOG00000000351RPA19747.260Hippocampus_comes
ENSCANG00000030911RPA19961.953ENSIPUG00000004400rpa19761.953Ictalurus_punctatus
ENSCANG00000030911RPA19979.112ENSSTOG00000022475RPA19879.112Ictidomys_tridecemlineatus
ENSCANG00000030911RPA19785.884ENSJJAG00000000876Rpa19885.884Jaculus_jaculus
ENSCANG00000030911RPA19861.655ENSKMAG00000005605rpa19661.655Kryptolebias_marmoratus
ENSCANG00000030911RPA19856.655ENSKMAG00000000234RPA19656.655Kryptolebias_marmoratus
ENSCANG00000030911RPA19863.265ENSLBEG00000002281RPA18363.265Labrus_bergylta
ENSCANG00000030911RPA19864.947ENSLBEG00000021604rpa19664.947Labrus_bergylta
ENSCANG00000030911RPA17970.460ENSLACG00000007210RPA19270.460Latimeria_chalumnae
ENSCANG00000030911RPA19868.151ENSLOCG00000006397rpa19668.151Lepisosteus_oculatus
ENSCANG00000030911RPA19984.641ENSLAFG00000015354RPA19884.641Loxodonta_africana
ENSCANG00000030911RPA18391.502ENSMFAG00000036138-10091.502Macaca_fascicularis
ENSCANG00000030911RPA19986.311ENSMMUG00000002442-9886.311Macaca_mulatta
ENSCANG00000030911RPA110093.058ENSMMUG00000011604-10093.058Macaca_mulatta
ENSCANG00000030911RPA19984.522ENSMNEG00000029837-9884.522Macaca_nemestrina
ENSCANG00000030911RPA19792.712ENSMNEG00000031632-9892.712Macaca_nemestrina
ENSCANG00000030911RPA19986.985ENSMLEG00000038768-10086.985Mandrillus_leucophaeus
ENSCANG00000030911RPA19863.657ENSMAMG00000020097RPA18662.500Mastacembelus_armatus
ENSCANG00000030911RPA19667.031ENSMAMG00000017993rpa19967.031Mastacembelus_armatus
ENSCANG00000030911RPA19856.844ENSMZEG00005024731RPA19756.844Maylandia_zebra
ENSCANG00000030911RPA19963.514ENSMZEG00005007551rpa19863.514Maylandia_zebra
ENSCANG00000030911RPA110072.637ENSMGAG00000005315RPA19872.637Meleagris_gallopavo
ENSCANG00000030911RPA19985.333ENSMAUG00000010474Rpa19985.333Mesocricetus_auratus
ENSCANG00000030911RPA110086.942ENSMICG00000012867RPA19886.942Microcebus_murinus
ENSCANG00000030911RPA19983.361ENSMOCG00000013019Rpa19883.361Microtus_ochrogaster
ENSCANG00000030911RPA19958.076ENSMMOG00000010868RPA19758.076Mola_mola
ENSCANG00000030911RPA19863.339ENSMMOG00000014292rpa19963.339Mola_mola
ENSCANG00000030911RPA19980.100ENSMODG00000010549RPA19880.100Monodelphis_domestica
ENSCANG00000030911RPA19861.765ENSMALG00000001208RPA18161.765Monopterus_albus
ENSCANG00000030911RPA19963.345ENSMALG00000011453rpa19863.514Monopterus_albus
ENSCANG00000030911RPA19982.645MGP_CAROLIEiJ_G0016734Rpa19882.645Mus_caroli
ENSCANG00000030911RPA19981.148ENSMUSG00000000751Rpa19881.148Mus_musculus
ENSCANG00000030911RPA19983.717MGP_PahariEiJ_G0017871Rpa19883.717Mus_pahari
ENSCANG00000030911RPA19981.178MGP_SPRETEiJ_G0017577Rpa19881.178Mus_spretus
ENSCANG00000030911RPA110084.298ENSMPUG00000013119RPA19884.298Mustela_putorius_furo
ENSCANG00000030911RPA19984.641ENSMLUG00000006113RPA19684.641Myotis_lucifugus
ENSCANG00000030911RPA19785.059ENSNGAG00000004522Rpa19485.059Nannospalax_galili
ENSCANG00000030911RPA19857.069ENSNBRG00000009672RPA19557.069Neolamprologus_brichardi
ENSCANG00000030911RPA19665.836ENSNBRG00000020595rpa19965.836Neolamprologus_brichardi
ENSCANG00000030911RPA110091.240ENSNLEG00000017149RPA19891.240Nomascus_leucogenys
ENSCANG00000030911RPA19969.154ENSMEUG00000006714RPA19969.154Notamacropus_eugenii
ENSCANG00000030911RPA19783.920ENSODEG00000009038RPA19683.920Octodon_degus
ENSCANG00000030911RPA19962.914ENSONIG00000013135rpa19862.914Oreochromis_niloticus
ENSCANG00000030911RPA19979.104ENSOANG00000010880RPA19979.270Ornithorhynchus_anatinus
ENSCANG00000030911RPA110082.362ENSOCUG00000001504RPA19882.362Oryctolagus_cuniculus
ENSCANG00000030911RPA19964.346ENSORLG00000004856rpa19864.346Oryzias_latipes
ENSCANG00000030911RPA19863.927ENSORLG00000003368RPA18763.927Oryzias_latipes
ENSCANG00000030911RPA19862.556ENSORLG00020015284RPA18662.556Oryzias_latipes_hni
ENSCANG00000030911RPA19964.516ENSORLG00020008980rpa19864.516Oryzias_latipes_hni
ENSCANG00000030911RPA19854.414ENSORLG00015020383RPA19754.414Oryzias_latipes_hsok
ENSCANG00000030911RPA17261.836ENSORLG00015005867-9461.836Oryzias_latipes_hsok
ENSCANG00000030911RPA19964.516ENSORLG00015013982rpa19864.516Oryzias_latipes_hsok
ENSCANG00000030911RPA19961.356ENSOMEG00000004704rpa19960.885Oryzias_melastigma
ENSCANG00000030911RPA19657.018ENSOMEG00000011040RPA19957.018Oryzias_melastigma
ENSCANG00000030911RPA19480.435ENSOGAG00000029379-9880.435Otolemur_garnettii
ENSCANG00000030911RPA110086.446ENSOGAG00000005581-9886.446Otolemur_garnettii
ENSCANG00000030911RPA110086.777ENSOARG00000014479RPA19886.777Ovis_aries
ENSCANG00000030911RPA110091.570ENSPPAG00000039680RPA19891.570Pan_paniscus
ENSCANG00000030911RPA110083.003ENSPPRG00000011807RPA19883.003Panthera_pardus
ENSCANG00000030911RPA110082.673ENSPTIG00000007898RPA19882.673Panthera_tigris_altaica
ENSCANG00000030911RPA110091.901ENSPTRG00000008539RPA19891.901Pan_troglodytes
ENSCANG00000030911RPA110093.223ENSPANG00000024592RPA19893.223Papio_anubis
ENSCANG00000030911RPA19462.589ENSPKIG00000008053rpa19262.589Paramormyrops_kingsleyae
ENSCANG00000030911RPA19974.415ENSPSIG00000015617RPA19974.415Pelodiscus_sinensis
ENSCANG00000030911RPA19658.439ENSPMGG00000000543RPA19957.477Periophthalmus_magnuspinnatus
ENSCANG00000030911RPA19964.421ENSPMGG00000011589rpa110064.594Periophthalmus_magnuspinnatus
ENSCANG00000030911RPA19984.385ENSPEMG00000021061Rpa19884.385Peromyscus_maniculatus_bairdii
ENSCANG00000030911RPA19978.843ENSPCIG00000019049RPA19878.843Phascolarctos_cinereus
ENSCANG00000030911RPA19962.755ENSPFOG00000003987rpa19762.755Poecilia_formosa
ENSCANG00000030911RPA17264.096ENSPLAG00000008844-6564.096Poecilia_latipinna
ENSCANG00000030911RPA19962.585ENSPLAG00000004984rpa19762.585Poecilia_latipinna
ENSCANG00000030911RPA19962.755ENSPMEG00000020602rpa19964.464Poecilia_mexicana
ENSCANG00000030911RPA19254.424ENSPMEG00000003627-9354.424Poecilia_mexicana
ENSCANG00000030911RPA19763.535ENSPREG00000010119RPA18663.702Poecilia_reticulata
ENSCANG00000030911RPA19455.893ENSPREG00000010174rpa19455.893Poecilia_reticulata
ENSCANG00000030911RPA110087.438ENSPCOG00000001799RPA19887.438Propithecus_coquereli
ENSCANG00000030911RPA19985.406ENSPVAG00000002149RPA19885.406Pteropus_vampyrus
ENSCANG00000030911RPA19963.682ENSPNYG00000016316rpa19966.011Pundamilia_nyererei
ENSCANG00000030911RPA19856.522ENSPNYG00000024165RPA19756.522Pundamilia_nyererei
ENSCANG00000030911RPA19956.102ENSPNAG00000008599rpa19656.545Pygocentrus_nattereri
ENSCANG00000030911RPA19984.541ENSRNOG00000003123Rpa19884.385Rattus_norvegicus
ENSCANG00000030911RPA110093.554ENSRBIG00000036587RPA19893.554Rhinopithecus_bieti
ENSCANG00000030911RPA110087.603ENSRROG00000043278RPA19887.603Rhinopithecus_roxellana
ENSCANG00000030911RPA17338.824YAR007CRFA16838.824Saccharomyces_cerevisiae
ENSCANG00000030911RPA19985.596ENSSBOG00000030233RPA19985.596Saimiri_boliviensis_boliviensis
ENSCANG00000030911RPA19979.504ENSSHAG00000007969RPA19779.504Sarcophilus_harrisii
ENSCANG00000030911RPA19965.753ENSSFOG00015005362rpa19065.753Scleropages_formosus
ENSCANG00000030911RPA19464.027ENSSMAG00000019746RPA18164.027Scophthalmus_maximus
ENSCANG00000030911RPA19365.899ENSSDUG00000016358RPA18465.385Seriola_dumerili
ENSCANG00000030911RPA19767.384ENSSDUG00000011949rpa19667.384Seriola_dumerili
ENSCANG00000030911RPA19767.742ENSSLDG00000011806rpa19667.742Seriola_lalandi_dorsalis
ENSCANG00000030911RPA19365.438ENSSLDG00000020784RPA18464.932Seriola_lalandi_dorsalis
ENSCANG00000030911RPA18982.353ENSSARG00000007506RPA110067.053Sorex_araneus
ENSCANG00000030911RPA19871.235ENSSPUG00000007223RPA19971.235Sphenodon_punctatus
ENSCANG00000030911RPA19963.238ENSSPAG00000009903rpa19863.238Stegastes_partitus
ENSCANG00000030911RPA19859.343ENSSPAG00000011165RPA19759.201Stegastes_partitus
ENSCANG00000030911RPA110090.592ENSSSCG00000017822RPA19890.592Sus_scrofa
ENSCANG00000030911RPA110071.927ENSTGUG00000005775RPA19871.927Taeniopygia_guttata
ENSCANG00000030911RPA19363.084ENSTRUG00000000405RPA17562.557Takifugu_rubripes
ENSCANG00000030911RPA19963.435ENSTRUG00000003616rpa19863.435Takifugu_rubripes
ENSCANG00000030911RPA19963.289ENSTNIG00000016199rpa19863.289Tetraodon_nigroviridis
ENSCANG00000030911RPA18493.023ENSTBEG00000002709RPA18193.023Tupaia_belangeri
ENSCANG00000030911RPA19984.934ENSTTRG00000001169RPA19884.934Tursiops_truncatus
ENSCANG00000030911RPA18993.478ENSUAMG00000015676RPA19789.689Ursus_americanus
ENSCANG00000030911RPA110089.721ENSUMAG00000009328RPA19889.721Ursus_maritimus
ENSCANG00000030911RPA110084.628ENSVPAG00000009443RPA19884.628Vicugna_pacos
ENSCANG00000030911RPA110085.289ENSVVUG00000021715RPA19885.289Vulpes_vulpes
ENSCANG00000030911RPA19972.559ENSXETG00000013538rpa19772.727Xenopus_tropicalis
ENSCANG00000030911RPA19461.081ENSXCOG00000010068rpa19461.808Xiphophorus_couchianus
ENSCANG00000030911RPA19757.914ENSXCOG00000009899-9957.914Xiphophorus_couchianus
ENSCANG00000030911RPA19863.946ENSXMAG00000010333RPA18163.946Xiphophorus_maculatus
ENSCANG00000030911RPA19961.054ENSXMAG00000004102rpa19962.478Xiphophorus_maculatus

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