EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCANG00000031088 (Gene tree)
Gene ID: 105524741
Gene Symbol: URB1
Alias: C21orf108|KIAA0539|NPA1
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Minus strand
Length: 78768 bases
Position: chrKN983794.1:284808-363575
Accession: 105524741
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000015273	Npa1	PF11707.8	6e-85	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000038206	URB1-201	8370	XM_011960128	ENSCANP00000015273	2271 (aa)	XP_011815518	A0A2K5IF22

Gene Model

Click here to download ENSCANG00000031088's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000031088's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000031088	URB1	99	95.314	ENSG00000142207	URB1	100	95.288	Homo_sapiens
ENSCANG00000031088	URB1	99	43.374	ENSAPOG00000020308	urb1	100	43.287	Acanthochromis_polyacanthus
ENSCANG00000031088	URB1	100	81.514	ENSAMEG00000011998	URB1	99	81.558	Ailuropoda_melanoleuca
ENSCANG00000031088	URB1	95	44.829	ENSACIG00000003248	urb1	97	44.968	Amphilophus_citrinellus
ENSCANG00000031088	URB1	99	41.156	ENSAOCG00000010364	urb1	100	41.243	Amphiprion_ocellaris
ENSCANG00000031088	URB1	97	53.319	ENSAPEG00000010758	urb1	99	53.214	Amphiprion_percula
ENSCANG00000031088	URB1	99	43.688	ENSATEG00000011790	urb1	97	44.509	Anabas_testudineus
ENSCANG00000031088	URB1	97	56.763	ENSAPLG00000012791	URB1	100	56.628	Anas_platyrhynchos
ENSCANG00000031088	URB1	99	53.958	ENSACAG00000002817	URB1	98	53.630	Anolis_carolinensis
ENSCANG00000031088	URB1	100	93.574	ENSANAG00000024617	URB1	100	93.574	Aotus_nancymaae
ENSCANG00000031088	URB1	99	45.181	ENSACLG00000024865	urb1	100	45.020	Astatotilapia_calliptera
ENSCANG00000031088	URB1	99	40.245	ENSAMXG00000012306	urb1	99	40.317	Astyanax_mexicanus
ENSCANG00000031088	URB1	99	77.598	ENSBTAG00000012412	URB1	99	77.641	Bos_taurus
ENSCANG00000031088	URB1	100	92.352	ENSCJAG00000009118	URB1	100	92.352	Callithrix_jacchus
ENSCANG00000031088	URB1	100	81.834	ENSCAFG00000008892	URB1	100	81.834	Canis_familiaris
ENSCANG00000031088	URB1	100	81.794	ENSCAFG00020025987	-	100	81.794	Canis_lupus_dingo
ENSCANG00000031088	URB1	100	80.739	ENSCAFG00020025994	-	100	80.739	Canis_lupus_dingo
ENSCANG00000031088	URB1	99	76.677	ENSCHIG00000015645	URB1	99	76.721	Capra_hircus
ENSCANG00000031088	URB1	100	86.306	ENSTSYG00000013286	URB1	99	86.306	Carlito_syrichta
ENSCANG00000031088	URB1	98	79.307	ENSCAPG00000015589	URB1	99	79.307	Cavia_aperea
ENSCANG00000031088	URB1	99	80.458	ENSCPOG00000006748	URB1	99	80.458	Cavia_porcellus
ENSCANG00000031088	URB1	100	93.527	ENSCCAG00000021299	URB1	100	93.527	Cebus_capucinus
ENSCANG00000031088	URB1	100	97.622	ENSCATG00000042630	URB1	100	97.622	Cercocebus_atys
ENSCANG00000031088	URB1	100	80.703	ENSCLAG00000005262	URB1	100	80.703	Chinchilla_lanigera
ENSCANG00000031088	URB1	100	95.967	ENSCSAG00000009584	URB1	100	95.967	Chlorocebus_sabaeus
ENSCANG00000031088	URB1	99	58.829	ENSCPBG00000006454	URB1	99	58.654	Chrysemys_picta_bellii
ENSCANG00000031088	URB1	99	76.951	ENSCGRG00001010616	Urb1	99	76.673	Cricetulus_griseus_chok1gshd
ENSCANG00000031088	URB1	98	76.508	ENSCGRG00000015840	Urb1	99	76.508	Cricetulus_griseus_crigri
ENSCANG00000031088	URB1	99	42.590	ENSCSEG00000012616	urb1	99	42.582	Cynoglossus_semilaevis
ENSCANG00000031088	URB1	97	51.937	ENSCVAG00000009076	urb1	99	52.597	Cyprinodon_variegatus
ENSCANG00000031088	URB1	99	43.640	ENSDARG00000060308	urb1	99	44.224	Danio_rerio
ENSCANG00000031088	URB1	85	80.694	ENSDNOG00000015586	URB1	99	80.694	Dasypus_novemcinctus
ENSCANG00000031088	URB1	100	80.062	ENSDORG00000006735	Urb1	100	80.062	Dipodomys_ordii
ENSCANG00000031088	URB1	92	80.479	ENSETEG00000009080	URB1	91	81.784	Echinops_telfairi
ENSCANG00000031088	URB1	100	81.822	ENSEASG00005007711	URB1	100	81.750	Equus_asinus_asinus
ENSCANG00000031088	URB1	97	89.078	ENSECAG00000013206	URB1	100	89.078	Equus_caballus
ENSCANG00000031088	URB1	57	85.000	ENSEEUG00000003626	-	57	85.000	Erinaceus_europaeus
ENSCANG00000031088	URB1	99	45.024	ENSELUG00000020516	urb1	98	45.258	Esox_lucius
ENSCANG00000031088	URB1	100	81.566	ENSFCAG00000002177	URB1	100	81.646	Felis_catus
ENSCANG00000031088	URB1	98	52.168	ENSFALG00000004636	URB1	99	52.085	Ficedula_albicollis
ENSCANG00000031088	URB1	100	80.641	ENSFDAG00000007288	URB1	95	80.641	Fukomys_damarensis
ENSCANG00000031088	URB1	99	42.082	ENSFHEG00000000202	urb1	99	42.499	Fundulus_heteroclitus
ENSCANG00000031088	URB1	93	47.882	ENSGMOG00000001838	urb1	94	47.615	Gadus_morhua
ENSCANG00000031088	URB1	99	56.843	ENSGALG00000015887	URB1	99	56.954	Gallus_gallus
ENSCANG00000031088	URB1	99	43.223	ENSGAFG00000020694	urb1	97	53.030	Gambusia_affinis
ENSCANG00000031088	URB1	99	44.684	ENSGACG00000011703	urb1	99	44.649	Gasterosteus_aculeatus
ENSCANG00000031088	URB1	99	58.191	ENSGAGG00000022544	URB1	99	58.060	Gopherus_agassizii
ENSCANG00000031088	URB1	100	95.288	ENSGGOG00000000285	URB1	100	95.288	Gorilla_gorilla
ENSCANG00000031088	URB1	99	45.150	ENSHBUG00000001904	urb1	100	45.020	Haplochromis_burtoni
ENSCANG00000031088	URB1	99	79.194	ENSHGLG00000004907	URB1	99	79.194	Heterocephalus_glaber_female
ENSCANG00000031088	URB1	99	79.886	ENSHGLG00100010749	URB1	99	79.886	Heterocephalus_glaber_male
ENSCANG00000031088	URB1	74	47.647	ENSHCOG00000018683	urb1	97	48.039	Hippocampus_comes
ENSCANG00000031088	URB1	99	40.869	ENSIPUG00000014721	urb1	99	40.905	Ictalurus_punctatus
ENSCANG00000031088	URB1	100	82.769	ENSSTOG00000004539	URB1	100	82.769	Ictidomys_tridecemlineatus
ENSCANG00000031088	URB1	94	47.660	ENSKMAG00000006001	urb1	99	47.720	Kryptolebias_marmoratus
ENSCANG00000031088	URB1	97	41.629	ENSLBEG00000027208	urb1	99	52.193	Labrus_bergylta
ENSCANG00000031088	URB1	99	48.854	ENSLACG00000017059	URB1	100	48.811	Latimeria_chalumnae
ENSCANG00000031088	URB1	99	46.304	ENSLOCG00000009190	urb1	99	46.393	Lepisosteus_oculatus
ENSCANG00000031088	URB1	99	78.751	ENSLAFG00000010407	URB1	99	78.751	Loxodonta_africana
ENSCANG00000031088	URB1	100	97.754	ENSMFAG00000034391	URB1	97	97.754	Macaca_fascicularis
ENSCANG00000031088	URB1	100	97.754	ENSMMUG00000010295	URB1	100	97.754	Macaca_mulatta
ENSCANG00000031088	URB1	100	96.301	ENSMNEG00000032981	URB1	100	96.301	Macaca_nemestrina
ENSCANG00000031088	URB1	100	98.063	ENSMLEG00000041435	URB1	100	98.063	Mandrillus_leucophaeus
ENSCANG00000031088	URB1	99	43.395	ENSMAMG00000011238	urb1	99	43.361	Mastacembelus_armatus
ENSCANG00000031088	URB1	99	40.935	ENSMZEG00005011862	urb1	100	40.656	Maylandia_zebra
ENSCANG00000031088	URB1	98	57.607	ENSMGAG00000014512	URB1	99	57.384	Meleagris_gallopavo
ENSCANG00000031088	URB1	92	79.854	ENSMAUG00000010516	Urb1	99	79.823	Mesocricetus_auratus
ENSCANG00000031088	URB1	99	85.733	ENSMICG00000016424	URB1	99	85.733	Microcebus_murinus
ENSCANG00000031088	URB1	99	74.758	ENSMOCG00000012613	Urb1	99	74.714	Microtus_ochrogaster
ENSCANG00000031088	URB1	99	64.768	ENSMODG00000021076	URB1	100	64.636	Monodelphis_domestica
ENSCANG00000031088	URB1	96	53.202	ENSMALG00000017411	urb1	96	53.863	Monopterus_albus
ENSCANG00000031088	URB1	99	75.627	MGP_CAROLIEiJ_G0020948	Urb1	99	75.627	Mus_caroli
ENSCANG00000031088	URB1	99	75.979	ENSMUSG00000039929	Urb1	99	75.979	Mus_musculus
ENSCANG00000031088	URB1	99	76.111	MGP_PahariEiJ_G0016653	Urb1	99	76.111	Mus_pahari
ENSCANG00000031088	URB1	99	75.880	MGP_SPRETEiJ_G0021854	Urb1	99	75.880	Mus_spretus
ENSCANG00000031088	URB1	100	80.282	ENSMPUG00000001123	URB1	100	80.282	Mustela_putorius_furo
ENSCANG00000031088	URB1	99	77.367	ENSNGAG00000001905	Urb1	99	77.323	Nannospalax_galili
ENSCANG00000031088	URB1	82	45.948	ENSNBRG00000001049	urb1	99	45.773	Neolamprologus_brichardi
ENSCANG00000031088	URB1	99	93.855	ENSNLEG00000026872	URB1	100	93.835	Nomascus_leucogenys
ENSCANG00000031088	URB1	93	67.113	ENSMEUG00000010828	URB1	94	66.730	Notamacropus_eugenii
ENSCANG00000031088	URB1	99	74.561	ENSOPRG00000013482	URB1	100	74.561	Ochotona_princeps
ENSCANG00000031088	URB1	100	79.385	ENSODEG00000002587	URB1	99	79.385	Octodon_degus
ENSCANG00000031088	URB1	99	45.399	ENSONIG00000005599	urb1	100	45.355	Oreochromis_niloticus
ENSCANG00000031088	URB1	99	80.467	ENSOCUG00000009381	URB1	99	80.467	Oryctolagus_cuniculus
ENSCANG00000031088	URB1	99	43.935	ENSORLG00000003429	urb1	99	43.912	Oryzias_latipes
ENSCANG00000031088	URB1	99	43.742	ENSORLG00020013785	urb1	99	43.780	Oryzias_latipes_hni
ENSCANG00000031088	URB1	95	47.075	ENSORLG00015019421	urb1	97	47.233	Oryzias_latipes_hsok
ENSCANG00000031088	URB1	78	50.057	ENSOMEG00000002094	urb1	98	50.057	Oryzias_melastigma
ENSCANG00000031088	URB1	99	85.066	ENSOGAG00000017140	URB1	100	85.066	Otolemur_garnettii
ENSCANG00000031088	URB1	97	77.844	ENSOARG00000013679	URB1	99	77.759	Ovis_aries
ENSCANG00000031088	URB1	100	95.861	ENSPPAG00000003423	URB1	100	95.861	Pan_paniscus
ENSCANG00000031088	URB1	100	81.646	ENSPPRG00000023131	URB1	100	81.646	Panthera_pardus
ENSCANG00000031088	URB1	92	79.990	ENSPTIG00000016125	URB1	98	79.990	Panthera_tigris_altaica
ENSCANG00000031088	URB1	100	95.729	ENSPTRG00000013852	URB1	100	95.729	Pan_troglodytes
ENSCANG00000031088	URB1	100	98.107	ENSPANG00000021964	URB1	100	98.107	Papio_anubis
ENSCANG00000031088	URB1	99	46.039	ENSPKIG00000003683	urb1	98	46.106	Paramormyrops_kingsleyae
ENSCANG00000031088	URB1	99	76.642	ENSPEMG00000021205	Urb1	99	76.642	Peromyscus_maniculatus_bairdii
ENSCANG00000031088	URB1	80	34.049	ENSPMAG00000009733	URB1	100	33.944	Petromyzon_marinus
ENSCANG00000031088	URB1	99	64.608	ENSPCIG00000016350	URB1	100	64.389	Phascolarctos_cinereus
ENSCANG00000031088	URB1	96	43.496	ENSPLAG00000004371	urb1	99	43.443	Poecilia_latipinna
ENSCANG00000031088	URB1	99	43.894	ENSPMEG00000006634	urb1	98	43.934	Poecilia_mexicana
ENSCANG00000031088	URB1	99	43.977	ENSPREG00000013453	urb1	99	43.816	Poecilia_reticulata
ENSCANG00000031088	URB1	99	94.960	ENSPPYG00000011359	URB1	100	94.892	Pongo_abelii
ENSCANG00000031088	URB1	99	67.329	ENSPCAG00000007430	URB1	99	67.329	Procavia_capensis
ENSCANG00000031088	URB1	100	86.658	ENSPCOG00000022695	URB1	100	86.658	Propithecus_coquereli
ENSCANG00000031088	URB1	100	79.974	ENSPVAG00000000889	URB1	100	79.798	Pteropus_vampyrus
ENSCANG00000031088	URB1	99	43.848	ENSPNYG00000010589	urb1	100	43.693	Pundamilia_nyererei
ENSCANG00000031088	URB1	99	41.135	ENSPNAG00000019324	urb1	99	40.827	Pygocentrus_nattereri
ENSCANG00000031088	URB1	99	76.121	ENSRNOG00000002080	Urb1	99	76.253	Rattus_norvegicus
ENSCANG00000031088	URB1	100	97.578	ENSRBIG00000033122	URB1	100	97.578	Rhinopithecus_bieti
ENSCANG00000031088	URB1	100	97.578	ENSRROG00000040237	URB1	100	97.578	Rhinopithecus_roxellana
ENSCANG00000031088	URB1	100	92.342	ENSSBOG00000027672	URB1	100	92.342	Saimiri_boliviensis_boliviensis
ENSCANG00000031088	URB1	99	64.423	ENSSHAG00000005140	URB1	100	64.248	Sarcophilus_harrisii
ENSCANG00000031088	URB1	93	46.685	ENSSFOG00015000339	urb1	99	46.497	Scleropages_formosus
ENSCANG00000031088	URB1	99	44.247	ENSSMAG00000003782	urb1	99	44.313	Scophthalmus_maximus
ENSCANG00000031088	URB1	99	45.178	ENSSDUG00000012313	urb1	99	44.917	Seriola_dumerili
ENSCANG00000031088	URB1	99	44.980	ENSSLDG00000023179	urb1	99	44.720	Seriola_lalandi_dorsalis
ENSCANG00000031088	URB1	99	55.338	ENSSPUG00000012447	URB1	99	55.389	Sphenodon_punctatus
ENSCANG00000031088	URB1	99	44.657	ENSSPAG00000006325	urb1	99	44.319	Stegastes_partitus
ENSCANG00000031088	URB1	100	78.945	ENSSSCG00000032024	URB1	100	78.901	Sus_scrofa
ENSCANG00000031088	URB1	73	58.518	ENSTGUG00000013442	URB1	100	58.065	Taeniopygia_guttata
ENSCANG00000031088	URB1	99	44.415	ENSTRUG00000009372	urb1	99	44.508	Takifugu_rubripes
ENSCANG00000031088	URB1	99	43.317	ENSTNIG00000016277	urb1	99	43.198	Tetraodon_nigroviridis
ENSCANG00000031088	URB1	81	85.507	ENSTBEG00000010044	URB1	81	85.507	Tupaia_belangeri
ENSCANG00000031088	URB1	91	79.393	ENSTTRG00000007712	URB1	92	79.603	Tursiops_truncatus
ENSCANG00000031088	URB1	100	81.382	ENSUAMG00000012231	URB1	99	81.382	Ursus_americanus
ENSCANG00000031088	URB1	95	81.628	ENSUMAG00000017419	URB1	98	82.876	Ursus_maritimus
ENSCANG00000031088	URB1	68	88.889	ENSVPAG00000001164	URB1	68	88.889	Vicugna_pacos
ENSCANG00000031088	URB1	100	81.503	ENSVVUG00000000551	URB1	100	81.503	Vulpes_vulpes
ENSCANG00000031088	URB1	99	50.323	ENSXETG00000009895	urb1	99	50.676	Xenopus_tropicalis
ENSCANG00000031088	URB1	99	41.233	ENSXCOG00000005500	urb1	96	45.971	Xiphophorus_couchianus
ENSCANG00000031088	URB1	99	41.295	ENSXMAG00000007253	urb1	99	41.332	Xiphophorus_maculatus