EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCANG00000031337 (Gene tree)
Gene ID: 105526501
Gene Symbol: CMSS1
Alias: C3orf26|MGC4308
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 371770 bases
Position: chrKN984696.1:348786-720555
Accession: 105526501
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000015761	CMS1	PF14617.6	1e-32	1	1
ENSCANP00000015759	CMS1	PF14617.6	1.3e-32	1	1
ENSCANP00000015761	DEAD	PF00270.29	4.2e-06	1	1
ENSCANP00000015759	DEAD	PF00270.29	5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000038697	CMSS1-202	1060	XM_011962502	ENSCANP00000015761	261 (aa)	XP_011817892	A0A2K5IGT3
ENSCANT00000038695	CMSS1-201	840	XM_011962503	ENSCANP00000015759	279 (aa)	XP_011817893	A0A2K5IGH1

Gene Model

Click here to download ENSCANG00000031337's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000031337's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000031337	CMSS1	100	96.057	ENSG00000184220	CMSS1	100	96.057	Homo_sapiens
ENSCANG00000031337	CMSS1	77	64.851	ENSAPOG00000010604	cmss1	82	64.851	Acanthochromis_polyacanthus
ENSCANG00000031337	CMSS1	99	89.189	ENSAMEG00000004092	CMSS1	100	89.189	Ailuropoda_melanoleuca
ENSCANG00000031337	CMSS1	77	54.455	ENSACIG00000021854	cmss1	75	54.455	Amphilophus_citrinellus
ENSCANG00000031337	CMSS1	100	50.825	ENSAOCG00000013361	cmss1	100	52.174	Amphiprion_ocellaris
ENSCANG00000031337	CMSS1	77	64.851	ENSAPEG00000005829	cmss1	100	52.000	Amphiprion_percula
ENSCANG00000031337	CMSS1	100	51.903	ENSATEG00000008209	cmss1	100	53.425	Anabas_testudineus
ENSCANG00000031337	CMSS1	88	68.261	ENSAPLG00000010542	CMSS1	100	68.261	Anas_platyrhynchos
ENSCANG00000031337	CMSS1	99	61.567	ENSACAG00000011065	CMSS1	99	61.111	Anolis_carolinensis
ENSCANG00000031337	CMSS1	100	93.214	ENSANAG00000023565	CMSS1	100	93.214	Aotus_nancymaae
ENSCANG00000031337	CMSS1	100	48.684	ENSACLG00000027294	cmss1	100	50.000	Astatotilapia_calliptera
ENSCANG00000031337	CMSS1	100	45.667	ENSAMXG00000002046	cmss1	100	46.959	Astyanax_mexicanus
ENSCANG00000031337	CMSS1	100	86.738	ENSBTAG00000013663	CMSS1	100	86.738	Bos_taurus
ENSCANG00000031337	CMSS1	100	92.857	ENSCJAG00000000610	CMSS1	100	92.857	Callithrix_jacchus
ENSCANG00000031337	CMSS1	99	90.734	ENSCAFG00000009230	CMSS1	94	90.734	Canis_familiaris
ENSCANG00000031337	CMSS1	100	89.655	ENSCAFG00020009464	-	95	90.347	Canis_lupus_dingo
ENSCANG00000031337	CMSS1	89	84.914	ENSCAFG00020024156	-	76	81.224	Canis_lupus_dingo
ENSCANG00000031337	CMSS1	98	87.938	ENSCHIG00000013003	CMSS1	93	87.938	Capra_hircus
ENSCANG00000031337	CMSS1	99	89.961	ENSTSYG00000009266	CMSS1	99	89.961	Carlito_syrichta
ENSCANG00000031337	CMSS1	85	73.362	ENSCAPG00000013584	CMSS1	87	80.208	Cavia_aperea
ENSCANG00000031337	CMSS1	100	87.097	ENSCPOG00000014680	CMSS1	100	87.097	Cavia_porcellus
ENSCANG00000031337	CMSS1	100	94.286	ENSCCAG00000034685	CMSS1	100	94.286	Cebus_capucinus
ENSCANG00000031337	CMSS1	100	98.925	ENSCATG00000031980	CMSS1	100	98.925	Cercocebus_atys
ENSCANG00000031337	CMSS1	88	93.450	ENSCLAG00000011241	CMSS1	98	93.450	Chinchilla_lanigera
ENSCANG00000031337	CMSS1	94	99.184	ENSCSAG00000006024	CMSS1	100	99.184	Chlorocebus_sabaeus
ENSCANG00000031337	CMSS1	100	68.459	ENSCHOG00000012098	CMSS1	100	68.459	Choloepus_hoffmanni
ENSCANG00000031337	CMSS1	72	41.327	ENSCING00000014848	-	100	41.711	Ciona_intestinalis
ENSCANG00000031337	CMSS1	100	82.079	ENSCGRG00001014305	Cmss1	100	82.079	Cricetulus_griseus_chok1gshd
ENSCANG00000031337	CMSS1	98	83.203	ENSCGRG00000006722	Cmss1	99	83.203	Cricetulus_griseus_crigri
ENSCANG00000031337	CMSS1	100	50.842	ENSCSEG00000004958	cmss1	100	50.987	Cynoglossus_semilaevis
ENSCANG00000031337	CMSS1	100	51.211	ENSCVAG00000005039	cmss1	100	52.577	Cyprinodon_variegatus
ENSCANG00000031337	CMSS1	100	47.811	ENSDARG00000112579	cmss1	100	46.918	Danio_rerio
ENSCANG00000031337	CMSS1	99	85.385	ENSDNOG00000040418	CMSS1	92	85.714	Dasypus_novemcinctus
ENSCANG00000031337	CMSS1	100	86.380	ENSDORG00000010461	Cmss1	100	86.380	Dipodomys_ordii
ENSCANG00000031337	CMSS1	51	50.000	ENSEBUG00000002156	-	96	50.000	Eptatretus_burgeri
ENSCANG00000031337	CMSS1	100	82.759	ENSEASG00005010966	CMSS1	99	92.237	Equus_asinus_asinus
ENSCANG00000031337	CMSS1	98	89.883	ENSECAG00000015662	CMSS1	99	91.593	Equus_caballus
ENSCANG00000031337	CMSS1	100	56.272	ENSEEUG00000007624	-	100	56.272	Erinaceus_europaeus
ENSCANG00000031337	CMSS1	92	57.500	ENSELUG00000019459	cmss1	100	51.333	Esox_lucius
ENSCANG00000031337	CMSS1	100	92.115	ENSFCAG00000044577	CMSS1	100	92.115	Felis_catus
ENSCANG00000031337	CMSS1	91	64.557	ENSFALG00000005816	CMSS1	100	64.557	Ficedula_albicollis
ENSCANG00000031337	CMSS1	87	90.789	ENSFDAG00000012577	CMSS1	100	90.789	Fukomys_damarensis
ENSCANG00000031337	CMSS1	87	60.606	ENSFHEG00000012008	cmss1	95	60.606	Fundulus_heteroclitus
ENSCANG00000031337	CMSS1	77	61.881	ENSGMOG00000016729	cmss1	100	52.313	Gadus_morhua
ENSCANG00000031337	CMSS1	88	68.261	ENSGALG00000015267	CMSS1	100	62.595	Gallus_gallus
ENSCANG00000031337	CMSS1	79	63.768	ENSGAFG00000021217	cmss1	77	63.861	Gambusia_affinis
ENSCANG00000031337	CMSS1	99	48.227	ENSGACG00000002798	cmss1	100	49.645	Gasterosteus_aculeatus
ENSCANG00000031337	CMSS1	91	69.620	ENSGAGG00000019861	CMSS1	100	62.366	Gopherus_agassizii
ENSCANG00000031337	CMSS1	99	96.923	ENSGGOG00000014125	CMSS1	99	96.923	Gorilla_gorilla
ENSCANG00000031337	CMSS1	100	49.175	ENSHBUG00000008431	cmss1	100	49.835	Haplochromis_burtoni
ENSCANG00000031337	CMSS1	97	84.980	ENSHGLG00000019481	CMSS1	100	84.980	Heterocephalus_glaber_female
ENSCANG00000031337	CMSS1	98	85.214	ENSHGLG00100010314	CMSS1	100	85.214	Heterocephalus_glaber_male
ENSCANG00000031337	CMSS1	100	52.649	ENSHCOG00000003222	cmss1	100	52.667	Hippocampus_comes
ENSCANG00000031337	CMSS1	100	47.586	ENSIPUG00000011591	cmss1	100	48.464	Ictalurus_punctatus
ENSCANG00000031337	CMSS1	100	89.606	ENSSTOG00000019366	CMSS1	100	89.606	Ictidomys_tridecemlineatus
ENSCANG00000031337	CMSS1	100	83.154	ENSJJAG00000014894	Cmss1	100	83.154	Jaculus_jaculus
ENSCANG00000031337	CMSS1	77	54.455	ENSKMAG00000002390	cmss1	89	52.036	Kryptolebias_marmoratus
ENSCANG00000031337	CMSS1	88	54.167	ENSLBEG00000006298	cmss1	88	55.605	Labrus_bergylta
ENSCANG00000031337	CMSS1	87	64.783	ENSLACG00000009293	CMSS1	100	64.783	Latimeria_chalumnae
ENSCANG00000031337	CMSS1	100	50.704	ENSLOCG00000009391	cmss1	100	51.408	Lepisosteus_oculatus
ENSCANG00000031337	CMSS1	87	90.789	ENSLAFG00000017509	CMSS1	100	90.789	Loxodonta_africana
ENSCANG00000031337	CMSS1	100	98.925	ENSMFAG00000045006	CMSS1	100	98.925	Macaca_fascicularis
ENSCANG00000031337	CMSS1	100	98.566	ENSMMUG00000002939	CMSS1	100	98.566	Macaca_mulatta
ENSCANG00000031337	CMSS1	100	98.566	ENSMNEG00000031315	CMSS1	100	98.566	Macaca_nemestrina
ENSCANG00000031337	CMSS1	100	98.925	ENSMLEG00000033660	CMSS1	100	98.925	Mandrillus_leucophaeus
ENSCANG00000031337	CMSS1	100	52.303	ENSMAMG00000017176	cmss1	100	52.560	Mastacembelus_armatus
ENSCANG00000031337	CMSS1	100	48.684	ENSMZEG00005021886	cmss1	100	50.000	Maylandia_zebra
ENSCANG00000031337	CMSS1	87	67.544	ENSMGAG00000014360	CMSS1	100	67.544	Meleagris_gallopavo
ENSCANG00000031337	CMSS1	100	60.215	ENSMAUG00000020609	Cmss1	100	60.215	Mesocricetus_auratus
ENSCANG00000031337	CMSS1	100	91.398	ENSMICG00000048977	CMSS1	100	91.398	Microcebus_murinus
ENSCANG00000031337	CMSS1	100	80.645	ENSMOCG00000021937	Cmss1	100	80.645	Microtus_ochrogaster
ENSCANG00000031337	CMSS1	77	62.376	ENSMMOG00000019794	cmss1	84	62.376	Mola_mola
ENSCANG00000031337	CMSS1	97	73.622	ENSMODG00000002275	CMSS1	97	72.308	Monodelphis_domestica
ENSCANG00000031337	CMSS1	100	52.397	ENSMALG00000004250	cmss1	100	51.890	Monopterus_albus
ENSCANG00000031337	CMSS1	100	82.143	MGP_CAROLIEiJ_G0020824	Cmss1	100	82.143	Mus_caroli
ENSCANG00000031337	CMSS1	100	82.857	ENSMUSG00000022748	Cmss1	100	82.857	Mus_musculus
ENSCANG00000031337	CMSS1	100	81.429	MGP_PahariEiJ_G0016524	Cmss1	100	81.429	Mus_pahari
ENSCANG00000031337	CMSS1	100	82.143	MGP_SPRETEiJ_G0021724	Cmss1	100	82.143	Mus_spretus
ENSCANG00000031337	CMSS1	99	91.892	ENSMPUG00000011324	CMSS1	99	91.892	Mustela_putorius_furo
ENSCANG00000031337	CMSS1	99	90.421	ENSMLUG00000001131	CMSS1	99	90.769	Myotis_lucifugus
ENSCANG00000031337	CMSS1	99	85.271	ENSNGAG00000020316	Cmss1	100	84.229	Nannospalax_galili
ENSCANG00000031337	CMSS1	100	48.355	ENSNBRG00000003095	cmss1	100	50.000	Neolamprologus_brichardi
ENSCANG00000031337	CMSS1	100	97.491	ENSNLEG00000034172	CMSS1	100	97.491	Nomascus_leucogenys
ENSCANG00000031337	CMSS1	87	66.667	ENSMEUG00000014505	CMSS1	100	66.667	Notamacropus_eugenii
ENSCANG00000031337	CMSS1	100	90.323	ENSOPRG00000002986	CMSS1	100	90.323	Ochotona_princeps
ENSCANG00000031337	CMSS1	100	70.251	ENSODEG00000009446	-	100	70.251	Octodon_degus
ENSCANG00000031337	CMSS1	100	74.552	ENSODEG00000001853	-	100	74.552	Octodon_degus
ENSCANG00000031337	CMSS1	100	80.783	ENSODEG00000003558	-	100	80.783	Octodon_degus
ENSCANG00000031337	CMSS1	100	86.022	ENSODEG00000005226	-	100	86.022	Octodon_degus
ENSCANG00000031337	CMSS1	77	61.386	ENSONIG00000006678	cmss1	77	61.386	Oreochromis_niloticus
ENSCANG00000031337	CMSS1	98	72.692	ENSOANG00000007529	CMSS1	100	74.249	Ornithorhynchus_anatinus
ENSCANG00000031337	CMSS1	99	90.734	ENSOCUG00000025366	CMSS1	94	90.734	Oryctolagus_cuniculus
ENSCANG00000031337	CMSS1	100	55.208	ENSORLG00000020340	cmss1	100	56.207	Oryzias_latipes
ENSCANG00000031337	CMSS1	88	54.585	ENSORLG00020012235	cmss1	99	54.506	Oryzias_latipes_hni
ENSCANG00000031337	CMSS1	77	57.426	ENSORLG00015015551	cmss1	75	57.426	Oryzias_latipes_hsok
ENSCANG00000031337	CMSS1	100	54.138	ENSOMEG00000012555	cmss1	100	54.325	Oryzias_melastigma
ENSCANG00000031337	CMSS1	87	91.667	ENSOGAG00000002045	CMSS1	100	91.667	Otolemur_garnettii
ENSCANG00000031337	CMSS1	98	87.984	ENSOARG00000017899	CMSS1	89	87.984	Ovis_aries
ENSCANG00000031337	CMSS1	99	96.899	ENSPPAG00000038515	CMSS1	95	96.899	Pan_paniscus
ENSCANG00000031337	CMSS1	100	92.115	ENSPPRG00000016767	CMSS1	100	92.115	Panthera_pardus
ENSCANG00000031337	CMSS1	100	91.756	ENSPTIG00000018274	CMSS1	100	91.756	Panthera_tigris_altaica
ENSCANG00000031337	CMSS1	100	96.057	ENSPTRG00000015157	CMSS1	100	96.327	Pan_troglodytes
ENSCANG00000031337	CMSS1	99	94.186	ENSPANG00000019980	CMSS1	99	94.186	Papio_anubis
ENSCANG00000031337	CMSS1	94	55.515	ENSPKIG00000012609	cmss1	97	56.439	Paramormyrops_kingsleyae
ENSCANG00000031337	CMSS1	88	72.926	ENSPSIG00000003849	CMSS1	100	72.926	Pelodiscus_sinensis
ENSCANG00000031337	CMSS1	90	56.250	ENSPMGG00000010286	cmss1	100	56.356	Periophthalmus_magnuspinnatus
ENSCANG00000031337	CMSS1	100	82.857	ENSPEMG00000016384	Cmss1	100	82.857	Peromyscus_maniculatus_bairdii
ENSCANG00000031337	CMSS1	78	52.941	ENSPMAG00000001146	cmss1	99	53.465	Petromyzon_marinus
ENSCANG00000031337	CMSS1	95	75.304	ENSPCIG00000015656	CMSS1	99	71.805	Phascolarctos_cinereus
ENSCANG00000031337	CMSS1	100	52.098	ENSPFOG00000016849	cmss1	100	52.448	Poecilia_formosa
ENSCANG00000031337	CMSS1	100	51.748	ENSPLAG00000008323	cmss1	100	52.098	Poecilia_latipinna
ENSCANG00000031337	CMSS1	100	50.164	ENSPMEG00000021020	cmss1	100	53.103	Poecilia_mexicana
ENSCANG00000031337	CMSS1	87	60.173	ENSPREG00000007618	cmss1	69	62.871	Poecilia_reticulata
ENSCANG00000031337	CMSS1	100	94.982	ENSPPYG00000013606	CMSS1	100	94.982	Pongo_abelii
ENSCANG00000031337	CMSS1	100	90.681	ENSPCOG00000020035	CMSS1	100	90.681	Propithecus_coquereli
ENSCANG00000031337	CMSS1	100	78.495	ENSPVAG00000017031	CMSS1	100	78.495	Pteropus_vampyrus
ENSCANG00000031337	CMSS1	91	48.561	ENSPNYG00000013428	cmss1	97	50.000	Pundamilia_nyererei
ENSCANG00000031337	CMSS1	100	47.176	ENSPNAG00000007912	cmss1	100	47.841	Pygocentrus_nattereri
ENSCANG00000031337	CMSS1	99	81.923	ENSRNOG00000027888	Cmss1	100	81.923	Rattus_norvegicus
ENSCANG00000031337	CMSS1	100	98.566	ENSRBIG00000037931	CMSS1	100	98.566	Rhinopithecus_bieti
ENSCANG00000031337	CMSS1	100	98.566	ENSRROG00000042910	CMSS1	100	98.566	Rhinopithecus_roxellana
ENSCANG00000031337	CMSS1	99	93.487	ENSSBOG00000030980	CMSS1	99	93.822	Saimiri_boliviensis_boliviensis
ENSCANG00000031337	CMSS1	95	74.603	ENSSHAG00000009321	CMSS1	99	74.603	Sarcophilus_harrisii
ENSCANG00000031337	CMSS1	100	53.199	ENSSFOG00015001509	cmss1	100	54.795	Scleropages_formosus
ENSCANG00000031337	CMSS1	100	51.546	ENSSMAG00000001653	cmss1	100	51.839	Scophthalmus_maximus
ENSCANG00000031337	CMSS1	100	52.203	ENSSDUG00000007719	cmss1	100	54.110	Seriola_dumerili
ENSCANG00000031337	CMSS1	79	63.768	ENSSLDG00000012300	cmss1	75	59.444	Seriola_lalandi_dorsalis
ENSCANG00000031337	CMSS1	100	74.643	ENSSARG00000003584	CMSS1	100	74.643	Sorex_araneus
ENSCANG00000031337	CMSS1	87	69.027	ENSSPUG00000003865	CMSS1	100	69.027	Sphenodon_punctatus
ENSCANG00000031337	CMSS1	79	64.078	ENSSPAG00000019182	cmss1	82	55.056	Stegastes_partitus
ENSCANG00000031337	CMSS1	100	91.756	ENSSSCG00000011970	CMSS1	100	91.756	Sus_scrofa
ENSCANG00000031337	CMSS1	88	65.502	ENSTGUG00000013635	CMSS1	100	65.502	Taeniopygia_guttata
ENSCANG00000031337	CMSS1	100	51.930	ENSTRUG00000015265	cmss1	100	52.632	Takifugu_rubripes
ENSCANG00000031337	CMSS1	77	56.436	ENSTNIG00000002880	cmss1	73	56.436	Tetraodon_nigroviridis
ENSCANG00000031337	CMSS1	100	60.000	ENSTBEG00000016722	CMSS1	100	60.000	Tupaia_belangeri
ENSCANG00000031337	CMSS1	100	86.380	ENSTTRG00000001562	CMSS1	100	86.380	Tursiops_truncatus
ENSCANG00000031337	CMSS1	99	90.734	ENSUAMG00000024209	CMSS1	100	93.722	Ursus_americanus
ENSCANG00000031337	CMSS1	99	90.698	ENSUMAG00000001983	CMSS1	99	90.310	Ursus_maritimus
ENSCANG00000031337	CMSS1	100	67.384	ENSVPAG00000000263	CMSS1	100	67.384	Vicugna_pacos
ENSCANG00000031337	CMSS1	94	89.837	ENSVVUG00000021647	-	100	89.837	Vulpes_vulpes
ENSCANG00000031337	CMSS1	86	90.265	ENSVVUG00000007776	-	89	90.265	Vulpes_vulpes
ENSCANG00000031337	CMSS1	100	54.804	ENSXETG00000011858	cmss1	100	54.804	Xenopus_tropicalis
ENSCANG00000031337	CMSS1	80	62.981	ENSXCOG00000018724	cmss1	69	63.366	Xiphophorus_couchianus
ENSCANG00000031337	CMSS1	80	62.981	ENSXMAG00000011243	cmss1	76	63.366	Xiphophorus_maculatus