EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000031785 (Gene tree)
Gene ID: 105500326
Gene Symbol: POLR1A
Alias: DKFZP586M0122|FLJ21915|RPA1|RPO1-4
Full Name: RNA polymerase I subunit A
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Minus strand
Length: 71171 bases
Position: chrKN979585.1:7398995-7470165
Accession: 105500326
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000016882	RNA_pol_Rpb1_5	PF04998.17	5.7e-104	1	1
ENSCANP00000016882	RNA_pol_Rpb1_4	PF05000.17	1.5e-25	1	1
ENSCANP00000016882	RNA_pol_Rpb1_2	PF00623.20	1.7e-70	1	1
ENSCANP00000016882	RNA_pol_Rpb1_3	PF04983.18	2.2e-18	1	1
ENSCANP00000016882	RNA_pol_Rpb1_1	PF04997.12	1.3e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000039823	POLR1A-201	5100	XM_011925770	ENSCANP00000016882	1699 (aa)	XP_011781160	A0A2K5IK92

Gene Model

Click here to download ENSCANG00000031785's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000031785's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000031785	POLR1A	87	30.769	ENSCANG00000010622	-	53	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000031785	POLR1A	100	94.480	ENSG00000068654	POLR1A	100	94.480	Homo_sapiens
ENSCANG00000031785	POLR1A	68	64.003	ENSAPOG00000017945	polr1a	99	64.340	Acanthochromis_polyacanthus
ENSCANG00000031785	POLR1A	100	87.972	ENSAMEG00000005807	POLR1A	100	88.030	Ailuropoda_melanoleuca
ENSCANG00000031785	POLR1A	96	63.830	ENSACIG00000022147	polr1a	100	63.798	Amphilophus_citrinellus
ENSCANG00000031785	POLR1A	100	63.146	ENSAOCG00000017336	polr1a	100	65.376	Amphiprion_ocellaris
ENSCANG00000031785	POLR1A	94	73.611	ENSAPEG00000016105	polr1a	98	73.611	Amphiprion_percula
ENSCANG00000031785	POLR1A	100	63.337	ENSATEG00000016773	polr1a	100	63.337	Anabas_testudineus
ENSCANG00000031785	POLR1A	86	70.007	ENSAPLG00000013871	POLR1A	99	69.871	Anas_platyrhynchos
ENSCANG00000031785	POLR1A	99	66.936	ENSACAG00000012141	POLR1A	99	66.879	Anolis_carolinensis
ENSCANG00000031785	POLR1A	100	91.981	ENSANAG00000033927	POLR1A	100	92.040	Aotus_nancymaae
ENSCANG00000031785	POLR1A	100	59.096	ENSACLG00000020541	polr1a	100	59.172	Astatotilapia_calliptera
ENSCANG00000031785	POLR1A	100	87.340	ENSBTAG00000006481	POLR1A	100	87.340	Bos_taurus
ENSCANG00000031785	POLR1A	99	37.205	WBGene00012999	rpoa-1	98	37.085	Caenorhabditis_elegans
ENSCANG00000031785	POLR1A	100	91.749	ENSCJAG00000019547	POLR1A	100	91.749	Callithrix_jacchus
ENSCANG00000031785	POLR1A	100	87.587	ENSCAFG00000007613	POLR1A	100	88.037	Canis_familiaris
ENSCANG00000031785	POLR1A	100	87.392	ENSCAFG00020014752	POLR1A	100	87.840	Canis_lupus_dingo
ENSCANG00000031785	POLR1A	100	85.756	ENSCHIG00000018204	POLR1A	100	85.698	Capra_hircus
ENSCANG00000031785	POLR1A	100	87.166	ENSTSYG00000002761	POLR1A	100	87.108	Carlito_syrichta
ENSCANG00000031785	POLR1A	97	81.287	ENSCAPG00000010132	POLR1A	100	81.134	Cavia_aperea
ENSCANG00000031785	POLR1A	100	85.781	ENSCPOG00000012350	POLR1A	100	85.781	Cavia_porcellus
ENSCANG00000031785	POLR1A	100	92.330	ENSCCAG00000019839	POLR1A	100	92.330	Cebus_capucinus
ENSCANG00000031785	POLR1A	100	96.165	ENSCATG00000029786	POLR1A	100	96.165	Cercocebus_atys
ENSCANG00000031785	POLR1A	100	86.095	ENSCLAG00000005187	POLR1A	100	86.153	Chinchilla_lanigera
ENSCANG00000031785	POLR1A	100	96.165	ENSCSAG00000016251	POLR1A	100	96.165	Chlorocebus_sabaeus
ENSCANG00000031785	POLR1A	99	71.893	ENSCPBG00000001115	POLR1A	99	71.835	Chrysemys_picta_bellii
ENSCANG00000031785	POLR1A	99	44.761	ENSCSAVG00000007184	-	99	44.419	Ciona_savignyi
ENSCANG00000031785	POLR1A	100	80.023	ENSCGRG00001006651	Polr1a	100	80.498	Cricetulus_griseus_chok1gshd
ENSCANG00000031785	POLR1A	60	81.617	ENSCGRG00000010834	Polr1a	100	82.415	Cricetulus_griseus_crigri
ENSCANG00000031785	POLR1A	100	59.536	ENSCSEG00000020190	polr1a	100	59.652	Cynoglossus_semilaevis
ENSCANG00000031785	POLR1A	100	61.943	ENSCVAG00000020941	polr1a	100	62.464	Cyprinodon_variegatus
ENSCANG00000031785	POLR1A	100	64.157	ENSDARG00000098375	polr1a	100	64.290	Danio_rerio
ENSCANG00000031785	POLR1A	100	80.185	ENSDNOG00000010829	POLR1A	100	80.359	Dasypus_novemcinctus
ENSCANG00000031785	POLR1A	100	85.029	ENSDORG00000008298	Polr1a	100	85.029	Dipodomys_ordii
ENSCANG00000031785	POLR1A	72	100.000	ENSETEG00000000412	-	72	100.000	Echinops_telfairi
ENSCANG00000031785	POLR1A	88	67.442	ENSEBUG00000005667	-	99	67.442	Eptatretus_burgeri
ENSCANG00000031785	POLR1A	100	89.134	ENSEASG00005001625	POLR1A	100	89.134	Equus_asinus_asinus
ENSCANG00000031785	POLR1A	100	89.134	ENSECAG00000036306	-	100	89.134	Equus_caballus
ENSCANG00000031785	POLR1A	100	89.134	ENSECAG00000030510	-	100	89.134	Equus_caballus
ENSCANG00000031785	POLR1A	100	89.134	ENSECAG00000010092	POLR1A	100	89.134	Equus_caballus
ENSCANG00000031785	POLR1A	81	95.745	ENSEEUG00000000676	POLR1A	81	95.556	Erinaceus_europaeus
ENSCANG00000031785	POLR1A	100	64.754	ENSELUG00000012769	polr1a	99	64.696	Esox_lucius
ENSCANG00000031785	POLR1A	100	88.844	ENSFCAG00000008966	POLR1A	100	88.844	Felis_catus
ENSCANG00000031785	POLR1A	99	68.347	ENSFALG00000010082	POLR1A	99	68.227	Ficedula_albicollis
ENSCANG00000031785	POLR1A	100	85.897	ENSFDAG00000013726	POLR1A	100	85.665	Fukomys_damarensis
ENSCANG00000031785	POLR1A	100	59.871	ENSFHEG00000005996	polr1a	100	59.639	Fundulus_heteroclitus
ENSCANG00000031785	POLR1A	100	57.699	ENSGMOG00000002230	polr1a	100	57.614	Gadus_morhua
ENSCANG00000031785	POLR1A	90	66.431	ENSGALG00000038160	-	99	66.560	Gallus_gallus
ENSCANG00000031785	POLR1A	100	61.877	ENSGAFG00000015266	polr1a	100	62.305	Gambusia_affinis
ENSCANG00000031785	POLR1A	100	62.478	ENSGACG00000018791	polr1a	100	62.478	Gasterosteus_aculeatus
ENSCANG00000031785	POLR1A	89	72.409	ENSGAGG00000004984	-	99	72.280	Gopherus_agassizii
ENSCANG00000031785	POLR1A	100	94.538	ENSGGOG00000001788	POLR1A	100	94.538	Gorilla_gorilla
ENSCANG00000031785	POLR1A	90	60.814	ENSHBUG00000020021	polr1a	99	61.372	Haplochromis_burtoni
ENSCANG00000031785	POLR1A	100	86.361	ENSHGLG00000006334	POLR1A	100	86.361	Heterocephalus_glaber_female
ENSCANG00000031785	POLR1A	100	86.111	ENSHGLG00100006614	POLR1A	100	86.111	Heterocephalus_glaber_male
ENSCANG00000031785	POLR1A	100	59.472	ENSHCOG00000003345	polr1a	100	59.734	Hippocampus_comes
ENSCANG00000031785	POLR1A	100	63.316	ENSIPUG00000013174	polr1a	100	63.033	Ictalurus_punctatus
ENSCANG00000031785	POLR1A	99	84.700	ENSSTOG00000012580	POLR1A	99	84.817	Ictidomys_tridecemlineatus
ENSCANG00000031785	POLR1A	100	85.052	ENSJJAG00000013113	Polr1a	100	85.052	Jaculus_jaculus
ENSCANG00000031785	POLR1A	100	63.473	ENSKMAG00000007399	polr1a	100	63.182	Kryptolebias_marmoratus
ENSCANG00000031785	POLR1A	94	65.360	ENSLBEG00000015401	polr1a	99	65.640	Labrus_bergylta
ENSCANG00000031785	POLR1A	52	71.600	ENSLACG00000003218	polr1a	100	71.600	Latimeria_chalumnae
ENSCANG00000031785	POLR1A	100	67.954	ENSLOCG00000010881	polr1a	100	67.954	Lepisosteus_oculatus
ENSCANG00000031785	POLR1A	100	86.929	ENSLAFG00000014948	POLR1A	100	87.045	Loxodonta_africana
ENSCANG00000031785	POLR1A	100	96.223	ENSMFAG00000046097	POLR1A	100	96.223	Macaca_fascicularis
ENSCANG00000031785	POLR1A	100	96.107	ENSMMUG00000015815	POLR1A	100	96.107	Macaca_mulatta
ENSCANG00000031785	POLR1A	100	96.165	ENSMNEG00000043313	POLR1A	100	96.165	Macaca_nemestrina
ENSCANG00000031785	POLR1A	100	95.526	ENSMLEG00000042428	POLR1A	100	95.526	Mandrillus_leucophaeus
ENSCANG00000031785	POLR1A	100	63.337	ENSMAMG00000016565	polr1a	100	63.631	Mastacembelus_armatus
ENSCANG00000031785	POLR1A	100	62.773	ENSMZEG00005004915	polr1a	100	62.984	Maylandia_zebra
ENSCANG00000031785	POLR1A	99	66.396	ENSMGAG00000013111	POLR1A	99	66.338	Meleagris_gallopavo
ENSCANG00000031785	POLR1A	92	84.320	ENSMAUG00000008497	Polr1a	100	84.659	Mesocricetus_auratus
ENSCANG00000031785	POLR1A	100	89.779	ENSMICG00000000757	POLR1A	100	89.489	Microcebus_murinus
ENSCANG00000031785	POLR1A	100	84.549	ENSMOCG00000000122	Polr1a	100	84.664	Microtus_ochrogaster
ENSCANG00000031785	POLR1A	100	62.507	ENSMMOG00000010216	polr1a	100	62.391	Mola_mola
ENSCANG00000031785	POLR1A	100	72.764	ENSMODG00000009335	POLR1A	100	72.238	Monodelphis_domestica
ENSCANG00000031785	POLR1A	100	63.167	ENSMALG00000013363	polr1a	100	63.341	Monopterus_albus
ENSCANG00000031785	POLR1A	100	82.986	MGP_CAROLIEiJ_G0028494	Polr1a	100	83.044	Mus_caroli
ENSCANG00000031785	POLR1A	100	83.218	ENSMUSG00000049553	Polr1a	100	83.333	Mus_musculus
ENSCANG00000031785	POLR1A	100	83.738	MGP_PahariEiJ_G0022230	Polr1a	100	83.796	Mus_pahari
ENSCANG00000031785	POLR1A	100	81.730	MGP_SPRETEiJ_G0029499	Polr1a	100	83.112	Mus_spretus
ENSCANG00000031785	POLR1A	100	87.972	ENSMPUG00000009135	POLR1A	100	88.263	Mustela_putorius_furo
ENSCANG00000031785	POLR1A	100	86.647	ENSMLUG00000015723	POLR1A	100	86.647	Myotis_lucifugus
ENSCANG00000031785	POLR1A	100	85.055	ENSNGAG00000017907	Polr1a	100	85.541	Nannospalax_galili
ENSCANG00000031785	POLR1A	100	62.888	ENSNBRG00000000519	polr1a	100	63.100	Neolamprologus_brichardi
ENSCANG00000031785	POLR1A	100	92.713	ENSNLEG00000002264	POLR1A	100	92.713	Nomascus_leucogenys
ENSCANG00000031785	POLR1A	74	92.913	ENSMEUG00000011665	-	74	92.913	Notamacropus_eugenii
ENSCANG00000031785	POLR1A	99	79.988	ENSOPRG00000008269	POLR1A	100	79.929	Ochotona_princeps
ENSCANG00000031785	POLR1A	100	86.477	ENSODEG00000003542	POLR1A	100	86.535	Octodon_degus
ENSCANG00000031785	POLR1A	100	63.426	ENSONIG00000015895	polr1a	100	63.484	Oreochromis_niloticus
ENSCANG00000031785	POLR1A	100	88.328	ENSOCUG00000010138	POLR1A	100	88.328	Oryctolagus_cuniculus
ENSCANG00000031785	POLR1A	100	61.932	ENSORLG00000008753	polr1a	99	62.384	Oryzias_latipes
ENSCANG00000031785	POLR1A	100	61.285	ENSORLG00020020726	polr1a	99	60.857	Oryzias_latipes_hni
ENSCANG00000031785	POLR1A	96	74.468	ENSORLG00015016071	polr1a	99	74.444	Oryzias_latipes_hsok
ENSCANG00000031785	POLR1A	100	88.379	ENSOGAG00000004031	POLR1A	100	88.379	Otolemur_garnettii
ENSCANG00000031785	POLR1A	100	86.934	ENSOARG00000020601	POLR1A	100	86.992	Ovis_aries
ENSCANG00000031785	POLR1A	100	94.189	ENSPPAG00000042450	POLR1A	100	94.189	Pan_paniscus
ENSCANG00000031785	POLR1A	100	88.902	ENSPPRG00000006702	POLR1A	100	88.902	Panthera_pardus
ENSCANG00000031785	POLR1A	100	88.361	ENSPTIG00000018783	POLR1A	100	88.361	Panthera_tigris_altaica
ENSCANG00000031785	POLR1A	100	94.015	ENSPTRG00000012147	POLR1A	100	94.015	Pan_troglodytes
ENSCANG00000031785	POLR1A	100	96.049	ENSPANG00000025908	POLR1A	100	96.049	Papio_anubis
ENSCANG00000031785	POLR1A	94	76.389	ENSPKIG00000005468	polr1a	99	76.389	Paramormyrops_kingsleyae
ENSCANG00000031785	POLR1A	63	66.606	ENSPSIG00000009321	-	99	66.819	Pelodiscus_sinensis
ENSCANG00000031785	POLR1A	54	63.568	ENSPMGG00000009718	polr1a	95	63.568	Periophthalmus_magnuspinnatus
ENSCANG00000031785	POLR1A	82	87.194	ENSPEMG00000022224	Polr1a	100	85.491	Peromyscus_maniculatus_bairdii
ENSCANG00000031785	POLR1A	95	76.274	ENSPCIG00000004222	POLR1A	99	76.549	Phascolarctos_cinereus
ENSCANG00000031785	POLR1A	100	62.652	ENSPFOG00000005025	polr1a	100	62.884	Poecilia_formosa
ENSCANG00000031785	POLR1A	100	62.942	ENSPLAG00000021389	polr1a	100	63.057	Poecilia_latipinna
ENSCANG00000031785	POLR1A	100	61.089	ENSPMEG00000006463	polr1a	100	61.516	Poecilia_mexicana
ENSCANG00000031785	POLR1A	100	62.710	ENSPREG00000002389	polr1a	100	62.826	Poecilia_reticulata
ENSCANG00000031785	POLR1A	100	93.783	ENSPPYG00000012217	POLR1A	100	93.783	Pongo_abelii
ENSCANG00000031785	POLR1A	90	96.000	ENSPCAG00000011582	POLR1A	88	96.000	Procavia_capensis
ENSCANG00000031785	POLR1A	100	89.431	ENSPCOG00000026987	POLR1A	100	89.199	Propithecus_coquereli
ENSCANG00000031785	POLR1A	95	91.176	ENSPVAG00000012674	POLR1A	95	90.459	Pteropus_vampyrus
ENSCANG00000031785	POLR1A	100	62.773	ENSPNYG00000000026	polr1a	100	62.984	Pundamilia_nyererei
ENSCANG00000031785	POLR1A	100	64.645	ENSPNAG00000019223	polr1a	100	64.641	Pygocentrus_nattereri
ENSCANG00000031785	POLR1A	100	84.838	ENSRNOG00000009545	Polr1a	100	85.012	Rattus_norvegicus
ENSCANG00000031785	POLR1A	100	96.223	ENSRBIG00000028335	POLR1A	100	96.223	Rhinopithecus_bieti
ENSCANG00000031785	POLR1A	100	96.165	ENSRROG00000031473	POLR1A	100	96.165	Rhinopithecus_roxellana
ENSCANG00000031785	POLR1A	99	35.714	YOR341W	RPA190	99	35.619	Saccharomyces_cerevisiae
ENSCANG00000031785	POLR1A	100	91.400	ENSSBOG00000030262	POLR1A	100	91.400	Saimiri_boliviensis_boliviensis
ENSCANG00000031785	POLR1A	100	71.141	ENSSHAG00000014739	POLR1A	100	70.855	Sarcophilus_harrisii
ENSCANG00000031785	POLR1A	100	65.107	ENSSFOG00015019716	polr1a	100	65.122	Scleropages_formosus
ENSCANG00000031785	POLR1A	100	63.768	ENSSMAG00000014342	polr1a	100	63.631	Scophthalmus_maximus
ENSCANG00000031785	POLR1A	100	63.793	ENSSDUG00000014631	polr1a	100	64.005	Seriola_dumerili
ENSCANG00000031785	POLR1A	100	61.795	ENSSLDG00000024095	polr1a	100	61.993	Seriola_lalandi_dorsalis
ENSCANG00000031785	POLR1A	75	96.809	ENSSARG00000003136	-	76	96.809	Sorex_araneus
ENSCANG00000031785	POLR1A	94	78.974	ENSSPUG00000004215	POLR1A	98	78.974	Sphenodon_punctatus
ENSCANG00000031785	POLR1A	63	67.044	ENSSPAG00000016341	polr1a	94	67.044	Stegastes_partitus
ENSCANG00000031785	POLR1A	83	88.050	ENSSSCG00000008226	POLR1A	99	88.050	Sus_scrofa
ENSCANG00000031785	POLR1A	99	67.607	ENSTGUG00000010704	POLR1A	100	67.666	Taeniopygia_guttata
ENSCANG00000031785	POLR1A	100	61.543	ENSTRUG00000002210	polr1a	99	61.556	Takifugu_rubripes
ENSCANG00000031785	POLR1A	100	58.309	ENSTNIG00000010116	polr1a	100	58.309	Tetraodon_nigroviridis
ENSCANG00000031785	POLR1A	71	100.000	ENSTBEG00000008646	POLR1A	70	100.000	Tupaia_belangeri
ENSCANG00000031785	POLR1A	100	83.207	ENSTTRG00000008597	POLR1A	100	83.266	Tursiops_truncatus
ENSCANG00000031785	POLR1A	68	86.740	ENSUAMG00000012158	-	94	86.740	Ursus_americanus
ENSCANG00000031785	POLR1A	100	88.201	ENSUMAG00000006700	POLR1A	100	88.201	Ursus_maritimus
ENSCANG00000031785	POLR1A	100	87.413	ENSVVUG00000001245	POLR1A	100	87.863	Vulpes_vulpes
ENSCANG00000031785	POLR1A	100	65.434	ENSXETG00000001952	polr1a	100	66.480	Xenopus_tropicalis
ENSCANG00000031785	POLR1A	100	62.890	ENSXMAG00000004032	polr1a	100	62.948	Xiphophorus_maculatus