EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000031935 (Gene tree)
Gene ID: 105515616
Gene Symbol: ATRX
Alias: JMS|MRX52|RAD54|XH2|XNP
Full Name: ATRX%2C chromatin remodeler
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 295353 bases
Position: chrKN981214.1:1711413-2006765
Accession: 105515616
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000017562	ResIII	PF04851.15	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000040488	ATRX-203	7326	-	ENSCANP00000017541	2441 (aa)	-	A0A2K5IM00
ENSCANT00000040509	ATRX-204	2913	-	ENSCANP00000017562	970 (aa)	-	A0A2K5IM79
ENSCANT00000040449	ATRX-201	10570	XM_011947439	ENSCANP00000017502	2490 (aa)	XP_011802829	A0A2K5IM23
ENSCANT00000040454	ATRX-202	10456	XM_011947441	ENSCANP00000017507	2452 (aa)	XP_011802831	A0A2K5IM28

Gene Model

Click here to download ENSCANG00000031935's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000031935's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000031935	ATRX	51	37.097	ENSCANG00000039934	ERCC6L2	68	38.172
ENSCANG00000031935	ATRX	52	38.608	ENSCANG00000037736	HELLS	56	38.608
ENSCANG00000031935	ATRX	50	34.254	ENSCANG00000017939	-	65	34.021

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000031935	ATRX	85	43.902	FBgn0039338	XNP	68	45.856	Drosophila_melanogaster
ENSCANG00000031935	ATRX	100	96.360	ENSGGOG00000024999	ATRX	100	96.360	Gorilla_gorilla
ENSCANG00000031935	ATRX	100	96.660	ENSMFAG00000031719	ATRX	100	96.660	Macaca_fascicularis
ENSCANG00000031935	ATRX	100	96.660	ENSMNEG00000033171	ATRX	100	96.660	Macaca_nemestrina
ENSCANG00000031935	ATRX	100	96.562	ENSMLEG00000036012	ATRX	100	96.562	Mandrillus_leucophaeus
ENSCANG00000031935	ATRX	100	96.259	ENSNLEG00000001144	ATRX	99	96.259	Nomascus_leucogenys
ENSCANG00000031935	ATRX	99	96.247	ENSPPAG00000043806	ATRX	99	96.247	Pan_paniscus
ENSCANG00000031935	ATRX	99	96.349	ENSPTRG00000022047	ATRX	99	96.349	Pan_troglodytes
ENSCANG00000031935	ATRX	100	96.660	ENSPANG00000024984	ATRX	100	96.660	Papio_anubis
ENSCANG00000031935	ATRX	99	91.767	ENSPEMG00000022358	-	97	92.369	Peromyscus_maniculatus_bairdii