EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000031957 (Gene tree)
Gene ID: 105527769
Gene Symbol: -
Alias: -
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 3D
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Minus strand
Length: 13162 bases
Position: chrKN985306.1:2376090-2389251
Accession: 105527769
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000016986	APOBEC_N	PF08210.11	3.4e-106	1	2
ENSCANP00000016986	APOBEC_N	PF08210.11	3.4e-106	2	2
ENSCANP00000016993	APOBEC_N	PF08210.11	3.4e-106	1	2
ENSCANP00000016993	APOBEC_N	PF08210.11	3.4e-106	2	2
ENSCANP00000016992	APOBEC_N	PF08210.11	5.2e-104	1	2
ENSCANP00000016992	APOBEC_N	PF08210.11	5.2e-104	2	2
ENSCANP00000016986	APOBEC_C	PF05240.14	6.2e-65	1	2
ENSCANP00000016986	APOBEC_C	PF05240.14	6.2e-65	2	2
ENSCANP00000016993	APOBEC_C	PF05240.14	6.2e-65	1	2
ENSCANP00000016993	APOBEC_C	PF05240.14	6.2e-65	2	2
ENSCANP00000016992	APOBEC_C	PF05240.14	7.6e-65	1	2
ENSCANP00000016992	APOBEC_C	PF05240.14	7.6e-65	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000039934	-	1584	XM_011964203	ENSCANP00000016992	395 (aa)	XP_011819593	A0A2K5IKK7
ENSCANT00000039935	-	1119	-	ENSCANP00000016993	372 (aa)	-	A0A2K5IJY0
ENSCANT00000039928	-	1116	-	ENSCANP00000016986	371 (aa)	-	A0A2K5IKD7

Gene Model

Click here to download ENSCANG00000031957's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000031957's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000031957	-	98	34.500	ENSCANG00000035072	APOBEC2	88	34.673
ENSCANG00000031957	-	99	86.450	ENSCANG00000032904	-	100	86.450
ENSCANG00000031957	-	99	80.435	ENSCANG00000033269	-	99	80.435
ENSCANG00000031957	-	99	41.176	ENSCANG00000030513	-	100	41.176
ENSCANG00000031957	-	100	74.194	ENSCANG00000039177	APOBEC3C	100	74.194
ENSCANG00000031957	-	98	44.094	ENSCANG00000029968	-	77	44.094
ENSCANG00000031957	-	96	41.341	ENSCANG00000035131	AICDA	88	41.341

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000031957	-	99	82.114	ENSG00000128394	APOBEC3F	100	82.114	Homo_sapiens
ENSCANG00000031957	-	100	73.656	ENSG00000244509	APOBEC3C	100	73.656	Homo_sapiens
ENSCANG00000031957	-	100	75.806	ENSG00000243811	APOBEC3D	100	75.806	Homo_sapiens
ENSCANG00000031957	-	100	70.190	ENSANAG00000030088	-	99	70.053	Aotus_nancymaae
ENSCANG00000031957	-	70	64.394	ENSCJAG00000015317	-	100	64.394	Callithrix_jacchus
ENSCANG00000031957	-	99	47.594	ENSCAFG00020002615	-	99	47.594	Canis_lupus_dingo
ENSCANG00000031957	-	98	50.549	ENSTSYG00000030036	-	99	50.549	Carlito_syrichta
ENSCANG00000031957	-	99	53.951	ENSTSYG00000034260	-	98	53.951	Carlito_syrichta
ENSCANG00000031957	-	98	55.978	ENSTSYG00000028254	-	99	55.978	Carlito_syrichta
ENSCANG00000031957	-	99	66.667	ENSCCAG00000030932	-	84	66.667	Cebus_capucinus
ENSCANG00000031957	-	100	74.731	ENSCATG00000043226	APOBEC3C	100	74.731	Cercocebus_atys
ENSCANG00000031957	-	99	83.708	ENSCATG00000033502	-	100	82.162	Cercocebus_atys
ENSCANG00000031957	-	99	86.450	ENSCSAG00000006382	APOBEC3F	99	86.450	Chlorocebus_sabaeus
ENSCANG00000031957	-	100	73.656	ENSCSAG00000006402	APOBEC3C	100	73.656	Chlorocebus_sabaeus
ENSCANG00000031957	-	99	38.542	ENSDNOG00000044642	-	98	34.890	Dasypus_novemcinctus
ENSCANG00000031957	-	100	45.408	ENSEASG00005018641	-	100	45.408	Equus_asinus_asinus
ENSCANG00000031957	-	100	47.027	ENSECAG00000006071	-	98	45.822	Equus_caballus
ENSCANG00000031957	-	100	82.086	ENSGGOG00000038678	APOBEC3F	100	82.385	Gorilla_gorilla
ENSCANG00000031957	-	100	75.269	ENSGGOG00000036587	-	100	75.269	Gorilla_gorilla
ENSCANG00000031957	-	100	45.161	ENSHGLG00000017315	-	91	45.161	Heterocephalus_glaber_female
ENSCANG00000031957	-	100	45.161	ENSHGLG00100003105	-	94	45.161	Heterocephalus_glaber_male
ENSCANG00000031957	-	100	81.283	ENSMFAG00000004037	APOBEC3F	100	81.572	Macaca_fascicularis
ENSCANG00000031957	-	100	82.620	ENSMFAG00000002331	-	100	82.620	Macaca_fascicularis
ENSCANG00000031957	-	100	73.118	ENSMFAG00000016792	APOBEC3C	100	73.118	Macaca_fascicularis
ENSCANG00000031957	-	100	85.027	ENSMMUG00000004017	APOBEC3F	100	85.027	Macaca_mulatta
ENSCANG00000031957	-	99	76.087	ENSMMUG00000004018	APOBEC3C	96	76.087	Macaca_mulatta
ENSCANG00000031957	-	100	84.557	ENSMNEG00000043316	APOBEC3D	100	84.557	Macaca_nemestrina
ENSCANG00000031957	-	100	73.656	ENSMNEG00000045196	APOBEC3C	100	73.656	Macaca_nemestrina
ENSCANG00000031957	-	100	74.731	ENSMLEG00000036992	APOBEC3C	100	74.731	Mandrillus_leucophaeus
ENSCANG00000031957	-	100	82.888	ENSMLEG00000029642	APOBEC3F	100	83.198	Mandrillus_leucophaeus
ENSCANG00000031957	-	99	54.054	ENSMICG00000042615	-	89	54.054	Microcebus_murinus
ENSCANG00000031957	-	99	46.032	ENSMLUG00000023676	-	99	46.032	Myotis_lucifugus
ENSCANG00000031957	-	100	71.646	ENSNLEG00000035811	-	100	71.646	Nomascus_leucogenys
ENSCANG00000031957	-	100	69.355	ENSNLEG00000028392	APOBEC3C	100	69.355	Nomascus_leucogenys
ENSCANG00000031957	-	99	45.503	ENSOGAG00000030300	-	99	45.503	Otolemur_garnettii
ENSCANG00000031957	-	99	45.128	ENSOGAG00000032498	-	99	45.128	Otolemur_garnettii
ENSCANG00000031957	-	100	44.231	ENSOGAG00000033404	-	100	44.231	Otolemur_garnettii
ENSCANG00000031957	-	100	75.269	ENSPPAG00000028218	-	100	75.269	Pan_paniscus
ENSCANG00000031957	-	100	73.656	ENSPPAG00000014118	APOBEC3C	100	73.656	Pan_paniscus
ENSCANG00000031957	-	99	49.730	ENSPPRG00000003726	-	98	49.730	Panthera_pardus
ENSCANG00000031957	-	99	83.469	ENSPTRG00000014385	APOBEC3C	100	83.469	Pan_troglodytes
ENSCANG00000031957	-	100	75.269	ENSPTRG00000041588	APOBEC3D	100	75.269	Pan_troglodytes
ENSCANG00000031957	-	100	82.369	ENSPANG00000010775	APOBEC3F	100	82.369	Papio_anubis
ENSCANG00000031957	-	100	69.355	ENSPPYG00000011832	APOBEC3C	100	69.355	Pongo_abelii
ENSCANG00000031957	-	68	58.140	ENSPCOG00000022067	-	98	58.140	Propithecus_coquereli
ENSCANG00000031957	-	69	55.200	ENSPCOG00000018072	-	100	55.200	Propithecus_coquereli
ENSCANG00000031957	-	81	46.341	ENSPVAG00000009461	-	71	46.341	Pteropus_vampyrus
ENSCANG00000031957	-	99	78.049	ENSRBIG00000042297	-	99	82.803	Rhinopithecus_bieti
ENSCANG00000031957	-	100	77.322	ENSRBIG00000030834	-	100	76.471	Rhinopithecus_bieti
ENSCANG00000031957	-	100	84.848	ENSRBIG00000030323	-	100	84.848	Rhinopithecus_bieti
ENSCANG00000031957	-	100	81.421	ENSRROG00000028557	-	100	80.481	Rhinopithecus_roxellana
ENSCANG00000031957	-	100	83.690	ENSRROG00000029045	APOBEC3C	100	84.011	Rhinopithecus_roxellana
ENSCANG00000031957	-	99	78.049	ENSRROG00000029996	-	100	78.049	Rhinopithecus_roxellana
ENSCANG00000031957	-	100	68.954	ENSSBOG00000032780	-	100	68.954	Saimiri_boliviensis_boliviensis
ENSCANG00000031957	-	98	45.856	ENSUAMG00000004433	-	100	45.856	Ursus_americanus
ENSCANG00000031957	-	99	46.739	ENSUMAG00000014441	-	87	46.739	Ursus_maritimus
ENSCANG00000031957	-	79	50.327	ENSVVUG00000014628	-	94	50.000	Vulpes_vulpes