EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000032120 (Gene tree)
Gene ID: 105526374
Gene Symbol: RC3H1
Alias: KIAA2025|RNF198|RP5-1198E17.5|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Minus strand
Length: 55349 bases
Position: chrKN984673.1:4515016-4570364
Accession: 105526374
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000017324	zf-CCCH	PF00642.24	0.00029	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000040271	RC3H1-201	3697	XM_011962348	ENSCANP00000017324	1134 (aa)	XP_011817738	A0A2K5IKX7

Gene Model

Click here to download ENSCANG00000032120's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000032120's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000032120	RC3H1	96	52.393	ENSCANG00000043140	RC3H2	94	83.002

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000032120	RC3H1	100	99.295	ENSG00000135870	RC3H1	100	99.295	Homo_sapiens
ENSCANG00000032120	RC3H1	100	97.090	ENSAMEG00000015657	RC3H1	100	97.090	Ailuropoda_melanoleuca
ENSCANG00000032120	RC3H1	100	88.579	ENSAPLG00000005341	RC3H1	100	88.579	Anas_platyrhynchos
ENSCANG00000032120	RC3H1	100	85.602	ENSACAG00000015271	RC3H1	100	85.602	Anolis_carolinensis
ENSCANG00000032120	RC3H1	100	99.118	ENSANAG00000036716	RC3H1	100	99.118	Aotus_nancymaae
ENSCANG00000032120	RC3H1	100	96.032	ENSBTAG00000052708	RC3H1	100	96.032	Bos_taurus
ENSCANG00000032120	RC3H1	100	98.765	ENSCJAG00000009106	RC3H1	100	98.765	Callithrix_jacchus
ENSCANG00000032120	RC3H1	100	97.178	ENSCAFG00000014434	RC3H1	100	97.178	Canis_familiaris
ENSCANG00000032120	RC3H1	100	97.093	ENSCAFG00020017112	RC3H1	100	97.093	Canis_lupus_dingo
ENSCANG00000032120	RC3H1	100	96.384	ENSCHIG00000002873	RC3H1	100	96.384	Capra_hircus
ENSCANG00000032120	RC3H1	99	95.503	ENSTSYG00000003913	RC3H1	99	95.503	Carlito_syrichta
ENSCANG00000032120	RC3H1	100	91.454	ENSCPOG00000004349	RC3H1	100	91.366	Cavia_porcellus
ENSCANG00000032120	RC3H1	100	96.737	ENSCCAG00000025652	RC3H1	100	96.737	Cebus_capucinus
ENSCANG00000032120	RC3H1	100	99.735	ENSCATG00000033497	RC3H1	100	99.735	Cercocebus_atys
ENSCANG00000032120	RC3H1	100	94.978	ENSCLAG00000011267	RC3H1	100	94.978	Chinchilla_lanigera
ENSCANG00000032120	RC3H1	96	99.723	ENSCSAG00000011823	RC3H1	84	99.723	Chlorocebus_sabaeus
ENSCANG00000032120	RC3H1	100	89.921	ENSCPBG00000014670	RC3H1	100	89.921	Chrysemys_picta_bellii
ENSCANG00000032120	RC3H1	100	94.356	ENSCGRG00001020812	Rc3h1	100	93.915	Cricetulus_griseus_chok1gshd
ENSCANG00000032120	RC3H1	100	94.356	ENSCGRG00000011952	Rc3h1	100	93.915	Cricetulus_griseus_crigri
ENSCANG00000032120	RC3H1	55	95.820	ENSDNOG00000011494	RC3H1	99	95.820	Dasypus_novemcinctus
ENSCANG00000032120	RC3H1	100	96.032	ENSDORG00000004855	Rc3h1	100	96.032	Dipodomys_ordii
ENSCANG00000032120	RC3H1	81	96.766	ENSETEG00000012064	RC3H1	87	96.766	Echinops_telfairi
ENSCANG00000032120	RC3H1	100	96.120	ENSEASG00005017000	RC3H1	100	96.120	Equus_asinus_asinus
ENSCANG00000032120	RC3H1	100	95.944	ENSECAG00000021208	RC3H1	100	95.944	Equus_caballus
ENSCANG00000032120	RC3H1	83	97.059	ENSEEUG00000014861	RC3H1	93	83.117	Erinaceus_europaeus
ENSCANG00000032120	RC3H1	100	97.531	ENSFCAG00000014924	RC3H1	100	97.531	Felis_catus
ENSCANG00000032120	RC3H1	100	87.598	ENSFALG00000002947	RC3H1	100	87.074	Ficedula_albicollis
ENSCANG00000032120	RC3H1	100	95.154	ENSFDAG00000013303	RC3H1	100	95.154	Fukomys_damarensis
ENSCANG00000032120	RC3H1	100	87.555	ENSGALG00000004587	RC3H1	100	87.555	Gallus_gallus
ENSCANG00000032120	RC3H1	100	88.266	ENSGAGG00000018194	RC3H1	100	88.529	Gopherus_agassizii
ENSCANG00000032120	RC3H1	100	92.443	ENSGGOG00000005735	RC3H1	100	92.443	Gorilla_gorilla
ENSCANG00000032120	RC3H1	88	88.769	ENSHGLG00000004183	-	99	88.723	Heterocephalus_glaber_female
ENSCANG00000032120	RC3H1	100	94.537	ENSHGLG00100008577	RC3H1	100	94.537	Heterocephalus_glaber_male
ENSCANG00000032120	RC3H1	100	96.652	ENSSTOG00000016033	RC3H1	100	96.652	Ictidomys_tridecemlineatus
ENSCANG00000032120	RC3H1	100	95.238	ENSJJAG00000018915	Rc3h1	100	95.062	Jaculus_jaculus
ENSCANG00000032120	RC3H1	100	75.586	ENSLACG00000016186	RC3H1	100	78.804	Latimeria_chalumnae
ENSCANG00000032120	RC3H1	97	97.634	ENSLAFG00000004367	RC3H1	100	97.634	Loxodonta_africana
ENSCANG00000032120	RC3H1	100	99.559	ENSMFAG00000033725	RC3H1	100	99.559	Macaca_fascicularis
ENSCANG00000032120	RC3H1	100	99.471	ENSMMUG00000000630	RC3H1	100	99.471	Macaca_mulatta
ENSCANG00000032120	RC3H1	100	99.647	ENSMNEG00000035968	RC3H1	100	99.647	Macaca_nemestrina
ENSCANG00000032120	RC3H1	100	99.559	ENSMLEG00000037455	RC3H1	100	99.559	Mandrillus_leucophaeus
ENSCANG00000032120	RC3H1	97	94.456	ENSMAUG00000020864	Rc3h1	100	93.952	Mesocricetus_auratus
ENSCANG00000032120	RC3H1	100	97.619	ENSMICG00000003000	RC3H1	100	97.619	Microcebus_murinus
ENSCANG00000032120	RC3H1	93	92.999	ENSMOCG00000016587	Rc3h1	98	92.621	Microtus_ochrogaster
ENSCANG00000032120	RC3H1	100	92.423	ENSMODG00000004289	RC3H1	100	92.511	Monodelphis_domestica
ENSCANG00000032120	RC3H1	100	93.915	MGP_CAROLIEiJ_G0014756	Rc3h1	100	93.474	Mus_caroli
ENSCANG00000032120	RC3H1	100	93.739	ENSMUSG00000040423	Rc3h1	100	93.298	Mus_musculus
ENSCANG00000032120	RC3H1	100	93.563	MGP_PahariEiJ_G0027992	Rc3h1	100	93.122	Mus_pahari
ENSCANG00000032120	RC3H1	100	93.563	MGP_SPRETEiJ_G0015563	Rc3h1	100	93.122	Mus_spretus
ENSCANG00000032120	RC3H1	100	96.828	ENSMPUG00000004747	RC3H1	100	96.828	Mustela_putorius_furo
ENSCANG00000032120	RC3H1	100	95.855	ENSMLUG00000011127	RC3H1	100	95.855	Myotis_lucifugus
ENSCANG00000032120	RC3H1	100	95.944	ENSNGAG00000011135	Rc3h1	100	95.944	Nannospalax_galili
ENSCANG00000032120	RC3H1	100	99.206	ENSNLEG00000015327	RC3H1	100	99.206	Nomascus_leucogenys
ENSCANG00000032120	RC3H1	99	83.039	ENSOPRG00000013068	RC3H1	99	83.127	Ochotona_princeps
ENSCANG00000032120	RC3H1	100	94.626	ENSODEG00000014185	RC3H1	100	94.626	Octodon_degus
ENSCANG00000032120	RC3H1	100	91.790	ENSOANG00000000924	RC3H1	100	91.703	Ornithorhynchus_anatinus
ENSCANG00000032120	RC3H1	99	96.154	ENSOCUG00000004930	RC3H1	98	96.154	Oryctolagus_cuniculus
ENSCANG00000032120	RC3H1	100	90.405	ENSOGAG00000004044	RC3H1	100	90.405	Otolemur_garnettii
ENSCANG00000032120	RC3H1	100	96.842	ENSOARG00000013011	RC3H1	100	96.842	Ovis_aries
ENSCANG00000032120	RC3H1	100	99.471	ENSPPAG00000039253	RC3H1	100	99.471	Pan_paniscus
ENSCANG00000032120	RC3H1	100	96.825	ENSPPRG00000009007	RC3H1	100	96.825	Panthera_pardus
ENSCANG00000032120	RC3H1	100	97.191	ENSPTIG00000015326	RC3H1	100	97.191	Panthera_tigris_altaica
ENSCANG00000032120	RC3H1	100	99.471	ENSPTRG00000001702	RC3H1	100	99.471	Pan_troglodytes
ENSCANG00000032120	RC3H1	100	99.559	ENSPANG00000008886	RC3H1	100	99.559	Papio_anubis
ENSCANG00000032120	RC3H1	100	89.054	ENSPSIG00000016181	RC3H1	100	89.317	Pelodiscus_sinensis
ENSCANG00000032120	RC3H1	100	93.915	ENSPEMG00000011966	Rc3h1	100	93.563	Peromyscus_maniculatus_bairdii
ENSCANG00000032120	RC3H1	70	94.304	ENSPCIG00000002058	RC3H1	95	98.206	Phascolarctos_cinereus
ENSCANG00000032120	RC3H1	100	95.855	ENSPPYG00000000490	RC3H1	98	98.469	Pongo_abelii
ENSCANG00000032120	RC3H1	81	97.368	ENSPCAG00000010775	RC3H1	87	97.368	Procavia_capensis
ENSCANG00000032120	RC3H1	83	97.012	ENSPCOG00000021795	RC3H1	96	97.012	Propithecus_coquereli
ENSCANG00000032120	RC3H1	100	88.007	ENSPVAG00000007593	RC3H1	100	88.007	Pteropus_vampyrus
ENSCANG00000032120	RC3H1	97	61.749	ENSPNAG00000023439	rc3h1a	95	91.216	Pygocentrus_nattereri
ENSCANG00000032120	RC3H1	100	99.735	ENSRBIG00000037743	RC3H1	100	99.735	Rhinopithecus_bieti
ENSCANG00000032120	RC3H1	100	99.471	ENSRROG00000036546	RC3H1	100	99.471	Rhinopithecus_roxellana
ENSCANG00000032120	RC3H1	93	89.404	ENSSBOG00000010664	RC3H1	100	92.715	Saimiri_boliviensis_boliviensis
ENSCANG00000032120	RC3H1	100	91.454	ENSSHAG00000007589	RC3H1	100	91.542	Sarcophilus_harrisii
ENSCANG00000032120	RC3H1	87	86.712	ENSSARG00000004660	RC3H1	86	86.712	Sorex_araneus
ENSCANG00000032120	RC3H1	100	84.602	ENSSPUG00000018472	RC3H1	100	84.063	Sphenodon_punctatus
ENSCANG00000032120	RC3H1	100	97.531	ENSSSCG00000015498	RC3H1	100	97.531	Sus_scrofa
ENSCANG00000032120	RC3H1	100	87.730	ENSTGUG00000004090	RC3H1	100	87.730	Taeniopygia_guttata
ENSCANG00000032120	RC3H1	89	97.561	ENSTBEG00000005015	RC3H1	89	97.561	Tupaia_belangeri
ENSCANG00000032120	RC3H1	100	96.743	ENSTTRG00000008572	RC3H1	100	96.743	Tursiops_truncatus
ENSCANG00000032120	RC3H1	100	96.473	ENSUAMG00000019525	RC3H1	100	96.473	Ursus_americanus
ENSCANG00000032120	RC3H1	100	97.178	ENSUMAG00000020087	RC3H1	100	97.178	Ursus_maritimus
ENSCANG00000032120	RC3H1	91	98.874	ENSVPAG00000002591	RC3H1	92	98.874	Vicugna_pacos
ENSCANG00000032120	RC3H1	100	96.837	ENSVVUG00000014201	RC3H1	100	96.837	Vulpes_vulpes
ENSCANG00000032120	RC3H1	100	79.286	ENSXETG00000020030	rc3h1	100	78.833	Xenopus_tropicalis