EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCANG00000032760 (Gene tree)
Gene ID: 105508971
Gene Symbol: CPSF1
Alias: CPSF160
Full Name: cleavage and polyadenylation specific factor 1
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 12229 bases
Position: chrKN980162.1:703828-716056
Accession: 105508971
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000018678	CPSF_A	PF03178.15	5.7e-80	1	1
ENSCANP00000018683	CPSF_A	PF03178.15	1.3e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000041640	CPSF1-202	615	-	ENSCANP00000018683	204 (aa)	-	A0A2K5IPQ6
ENSCANT00000041635	CPSF1-201	4212	XM_011938026	ENSCANP00000018678	1403 (aa)	XP_011793416	A0A2K5IPQ0

Gene Model

Click here to download ENSCANG00000032760's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000032760's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000032760	CPSF1	100	98.039	ENSG00000071894	CPSF1	100	98.039	Homo_sapiens
ENSCANG00000032760	CPSF1	100	81.019	ENSAPOG00000019621	cpsf1	99	75.730	Acanthochromis_polyacanthus
ENSCANG00000032760	CPSF1	97	91.202	ENSAMEG00000005557	CPSF1	99	91.202	Ailuropoda_melanoleuca
ENSCANG00000032760	CPSF1	100	80.093	ENSACIG00000006112	cpsf1	98	75.159	Amphilophus_citrinellus
ENSCANG00000032760	CPSF1	100	81.019	ENSAOCG00000007120	cpsf1	98	77.179	Amphiprion_ocellaris
ENSCANG00000032760	CPSF1	100	81.019	ENSAPEG00000005755	cpsf1	98	76.847	Amphiprion_percula
ENSCANG00000032760	CPSF1	100	80.556	ENSATEG00000011097	cpsf1	99	75.694	Anabas_testudineus
ENSCANG00000032760	CPSF1	92	77.085	ENSACAG00000009655	CPSF1	99	77.085	Anolis_carolinensis
ENSCANG00000032760	CPSF1	99	93.282	ENSANAG00000036514	CPSF1	99	93.282	Aotus_nancymaae
ENSCANG00000032760	CPSF1	100	79.630	ENSACLG00000012231	cpsf1	99	75.964	Astatotilapia_calliptera
ENSCANG00000032760	CPSF1	100	80.093	ENSAMXG00000008485	cpsf1	98	70.934	Astyanax_mexicanus
ENSCANG00000032760	CPSF1	99	89.362	ENSBTAG00000008355	CPSF1	100	91.151	Bos_taurus
ENSCANG00000032760	CPSF1	99	32.883	WBGene00022301	cpsf-1	100	38.418	Caenorhabditis_elegans
ENSCANG00000032760	CPSF1	99	93.072	ENSCJAG00000021421	CPSF1	99	93.072	Callithrix_jacchus
ENSCANG00000032760	CPSF1	97	92.632	ENSCAFG00000001600	CPSF1	100	91.975	Canis_familiaris
ENSCANG00000032760	CPSF1	99	91.061	ENSCAFG00020020821	CPSF1	99	91.061	Canis_lupus_dingo
ENSCANG00000032760	CPSF1	99	85.605	ENSCHIG00000015833	CPSF1	99	85.605	Capra_hircus
ENSCANG00000032760	CPSF1	100	96.078	ENSTSYG00000028560	CPSF1	100	96.078	Carlito_syrichta
ENSCANG00000032760	CPSF1	100	89.352	ENSCAPG00000014921	CPSF1	99	91.183	Cavia_aperea
ENSCANG00000032760	CPSF1	100	89.352	ENSCPOG00000011448	CPSF1	99	89.161	Cavia_porcellus
ENSCANG00000032760	CPSF1	100	96.098	ENSCCAG00000037658	CPSF1	100	96.098	Cebus_capucinus
ENSCANG00000032760	CPSF1	100	99.020	ENSCATG00000037234	CPSF1	100	99.020	Cercocebus_atys
ENSCANG00000032760	CPSF1	99	90.973	ENSCLAG00000012166	CPSF1	99	90.973	Chinchilla_lanigera
ENSCANG00000032760	CPSF1	99	94.052	ENSCSAG00000008502	CPSF1	99	94.052	Chlorocebus_sabaeus
ENSCANG00000032760	CPSF1	99	83.180	ENSCPBG00000018910	CPSF1	95	83.180	Chrysemys_picta_bellii
ENSCANG00000032760	CPSF1	94	46.972	ENSCING00000000514	-	97	46.898	Ciona_intestinalis
ENSCANG00000032760	CPSF1	98	46.582	ENSCSAVG00000002293	-	99	46.027	Ciona_savignyi
ENSCANG00000032760	CPSF1	99	90.693	ENSCGRG00001016344	Cpsf1	99	90.693	Cricetulus_griseus_chok1gshd
ENSCANG00000032760	CPSF1	100	88.889	ENSCGRG00000003118	Cpsf1	99	89.662	Cricetulus_griseus_crigri
ENSCANG00000032760	CPSF1	100	77.315	ENSCSEG00000013464	cpsf1	99	75.544	Cynoglossus_semilaevis
ENSCANG00000032760	CPSF1	100	81.463	ENSCVAG00000014059	cpsf1	100	81.463	Cyprinodon_variegatus
ENSCANG00000032760	CPSF1	100	79.630	ENSDARG00000034178	cpsf1	98	76.972	Danio_rerio
ENSCANG00000032760	CPSF1	57	95.652	ENSDNOG00000043654	CPSF1	98	65.889	Dasypus_novemcinctus
ENSCANG00000032760	CPSF1	97	92.324	ENSDORG00000006278	Cpsf1	99	92.324	Dipodomys_ordii
ENSCANG00000032760	CPSF1	99	45.833	FBgn0024698	Cpsf160	99	43.780	Drosophila_melanogaster
ENSCANG00000032760	CPSF1	79	96.850	ENSETEG00000006022	CPSF1	80	96.850	Echinops_telfairi
ENSCANG00000032760	CPSF1	90	62.755	ENSEBUG00000006844	-	97	70.866	Eptatretus_burgeri
ENSCANG00000032760	CPSF1	99	91.760	ENSEASG00005010774	CPSF1	99	91.760	Equus_asinus_asinus
ENSCANG00000032760	CPSF1	99	91.760	ENSECAG00000022209	CPSF1	99	91.760	Equus_caballus
ENSCANG00000032760	CPSF1	99	89.595	ENSEEUG00000000471	CPSF1	99	89.595	Erinaceus_europaeus
ENSCANG00000032760	CPSF1	100	80.093	ENSELUG00000012271	cpsf1	100	76.045	Esox_lucius
ENSCANG00000032760	CPSF1	99	91.049	ENSFDAG00000016060	CPSF1	99	91.049	Fukomys_damarensis
ENSCANG00000032760	CPSF1	100	75.926	ENSFHEG00000016801	cpsf1	98	74.278	Fundulus_heteroclitus
ENSCANG00000032760	CPSF1	100	79.167	ENSGMOG00000000796	cpsf1	99	74.530	Gadus_morhua
ENSCANG00000032760	CPSF1	92	85.714	ENSGAFG00000018890	cpsf1	96	85.714	Gambusia_affinis
ENSCANG00000032760	CPSF1	100	79.167	ENSGACG00000008703	cpsf1	98	76.087	Gasterosteus_aculeatus
ENSCANG00000032760	CPSF1	99	80.788	ENSGAGG00000004276	CPSF1	97	85.000	Gopherus_agassizii
ENSCANG00000032760	CPSF1	100	98.529	ENSGGOG00000016185	CPSF1	100	98.529	Gorilla_gorilla
ENSCANG00000032760	CPSF1	100	62.857	ENSGGOG00000040487	-	97	63.285	Gorilla_gorilla
ENSCANG00000032760	CPSF1	100	79.630	ENSHBUG00000018900	cpsf1	98	76.500	Haplochromis_burtoni
ENSCANG00000032760	CPSF1	99	90.763	ENSHGLG00000016139	CPSF1	99	90.763	Heterocephalus_glaber_female
ENSCANG00000032760	CPSF1	99	90.693	ENSHGLG00100009750	CPSF1	99	90.693	Heterocephalus_glaber_male
ENSCANG00000032760	CPSF1	100	78.241	ENSHCOG00000018509	cpsf1	98	74.169	Hippocampus_comes
ENSCANG00000032760	CPSF1	100	80.556	ENSIPUG00000011259	cpsf1	98	74.071	Ictalurus_punctatus
ENSCANG00000032760	CPSF1	97	92.445	ENSSTOG00000009957	CPSF1	99	92.445	Ictidomys_tridecemlineatus
ENSCANG00000032760	CPSF1	99	90.833	ENSJJAG00000023002	Cpsf1	99	90.833	Jaculus_jaculus
ENSCANG00000032760	CPSF1	100	76.389	ENSKMAG00000001940	cpsf1	97	80.564	Kryptolebias_marmoratus
ENSCANG00000032760	CPSF1	100	79.167	ENSLBEG00000003601	cpsf1	98	75.225	Labrus_bergylta
ENSCANG00000032760	CPSF1	100	82.407	ENSLACG00000000233	CPSF1	91	77.404	Latimeria_chalumnae
ENSCANG00000032760	CPSF1	100	82.110	ENSLOCG00000008484	cpsf1	98	75.706	Lepisosteus_oculatus
ENSCANG00000032760	CPSF1	97	91.565	ENSLAFG00000022601	CPSF1	99	91.565	Loxodonta_africana
ENSCANG00000032760	CPSF1	100	99.020	ENSMFAG00000037013	CPSF1	100	99.020	Macaca_fascicularis
ENSCANG00000032760	CPSF1	100	99.020	ENSMMUG00000007380	CPSF1	100	99.020	Macaca_mulatta
ENSCANG00000032760	CPSF1	100	99.020	ENSMNEG00000043564	CPSF1	100	99.020	Macaca_nemestrina
ENSCANG00000032760	CPSF1	100	99.020	ENSMLEG00000043010	CPSF1	100	99.020	Mandrillus_leucophaeus
ENSCANG00000032760	CPSF1	100	80.556	ENSMAMG00000003803	cpsf1	99	76.590	Mastacembelus_armatus
ENSCANG00000032760	CPSF1	100	79.630	ENSMZEG00005001168	cpsf1	97	75.681	Maylandia_zebra
ENSCANG00000032760	CPSF1	99	90.623	ENSMAUG00000003601	Cpsf1	99	90.623	Mesocricetus_auratus
ENSCANG00000032760	CPSF1	99	91.882	ENSMICG00000015767	CPSF1	99	91.882	Microcebus_murinus
ENSCANG00000032760	CPSF1	100	89.815	ENSMOCG00000022758	Cpsf1	99	90.763	Microtus_ochrogaster
ENSCANG00000032760	CPSF1	100	78.704	ENSMMOG00000021245	cpsf1	98	76.305	Mola_mola
ENSCANG00000032760	CPSF1	100	87.963	ENSMODG00000010755	CPSF1	99	88.448	Monodelphis_domestica
ENSCANG00000032760	CPSF1	100	79.630	ENSMALG00000020545	cpsf1	98	75.138	Monopterus_albus
ENSCANG00000032760	CPSF1	99	90.973	MGP_CAROLIEiJ_G0019936	Cpsf1	99	90.973	Mus_caroli
ENSCANG00000032760	CPSF1	99	90.903	ENSMUSG00000034022	Cpsf1	99	90.903	Mus_musculus
ENSCANG00000032760	CPSF1	99	90.833	MGP_PahariEiJ_G0019946	Cpsf1	99	90.833	Mus_pahari
ENSCANG00000032760	CPSF1	99	90.903	MGP_SPRETEiJ_G0020839	Cpsf1	99	90.903	Mus_spretus
ENSCANG00000032760	CPSF1	94	91.790	ENSMPUG00000006419	CPSF1	93	91.790	Mustela_putorius_furo
ENSCANG00000032760	CPSF1	78	97.484	ENSMLUG00000000667	-	88	97.484	Myotis_lucifugus
ENSCANG00000032760	CPSF1	99	90.833	ENSNGAG00000022460	Cpsf1	99	90.833	Nannospalax_galili
ENSCANG00000032760	CPSF1	100	79.630	ENSNBRG00000000813	cpsf1	96	73.396	Neolamprologus_brichardi
ENSCANG00000032760	CPSF1	100	99.020	ENSNLEG00000010633	-	100	99.020	Nomascus_leucogenys
ENSCANG00000032760	CPSF1	84	96.512	ENSMEUG00000014922	CPSF1	85	96.512	Notamacropus_eugenii
ENSCANG00000032760	CPSF1	61	96.939	ENSOPRG00000004693	-	71	96.939	Ochotona_princeps
ENSCANG00000032760	CPSF1	99	91.043	ENSODEG00000013995	CPSF1	99	91.043	Octodon_degus
ENSCANG00000032760	CPSF1	100	79.167	ENSONIG00000007676	cpsf1	98	76.782	Oreochromis_niloticus
ENSCANG00000032760	CPSF1	58	81.450	ENSOANG00000010716	CPSF1	88	81.450	Ornithorhynchus_anatinus
ENSCANG00000032760	CPSF1	100	78.241	ENSORLG00000013544	cpsf1	98	74.913	Oryzias_latipes
ENSCANG00000032760	CPSF1	100	78.241	ENSORLG00020021693	cpsf1	98	74.983	Oryzias_latipes_hni
ENSCANG00000032760	CPSF1	100	78.241	ENSORLG00015009979	cpsf1	98	74.896	Oryzias_latipes_hsok
ENSCANG00000032760	CPSF1	100	78.241	ENSOMEG00000011849	cpsf1	98	75.000	Oryzias_melastigma
ENSCANG00000032760	CPSF1	99	91.882	ENSOGAG00000000315	CPSF1	99	91.882	Otolemur_garnettii
ENSCANG00000032760	CPSF1	100	98.529	ENSPPAG00000019280	CPSF1	100	98.529	Pan_paniscus
ENSCANG00000032760	CPSF1	100	61.905	ENSPTRG00000052516	-	97	62.319	Pan_troglodytes
ENSCANG00000032760	CPSF1	100	98.529	ENSPTRG00000049288	-	100	98.529	Pan_troglodytes
ENSCANG00000032760	CPSF1	100	98.529	ENSPTRG00000051253	-	100	98.529	Pan_troglodytes
ENSCANG00000032760	CPSF1	100	98.529	ENSPANG00000015005	CPSF1	100	98.529	Papio_anubis
ENSCANG00000032760	CPSF1	100	81.944	ENSPKIG00000002582	cpsf1	100	77.795	Paramormyrops_kingsleyae
ENSCANG00000032760	CPSF1	100	76.389	ENSPMGG00000022177	-	100	76.852	Periophthalmus_magnuspinnatus
ENSCANG00000032760	CPSF1	100	87.963	ENSPCIG00000009035	CPSF1	99	88.379	Phascolarctos_cinereus
ENSCANG00000032760	CPSF1	100	76.852	ENSPFOG00000012870	cpsf1	98	73.633	Poecilia_formosa
ENSCANG00000032760	CPSF1	100	76.389	ENSPREG00000016307	cpsf1	98	73.444	Poecilia_reticulata
ENSCANG00000032760	CPSF1	100	87.500	ENSPPYG00000018973	CPSF1	99	85.164	Pongo_abelii
ENSCANG00000032760	CPSF1	100	84.259	ENSPCAG00000011541	CPSF1	94	89.489	Procavia_capensis
ENSCANG00000032760	CPSF1	100	94.175	ENSPCOG00000020001	CPSF1	100	94.175	Propithecus_coquereli
ENSCANG00000032760	CPSF1	96	88.889	ENSPVAG00000006761	CPSF1	90	93.143	Pteropus_vampyrus
ENSCANG00000032760	CPSF1	100	79.630	ENSPNYG00000004906	cpsf1	99	76.104	Pundamilia_nyererei
ENSCANG00000032760	CPSF1	99	72.669	ENSPNAG00000024395	cpsf1	98	72.669	Pygocentrus_nattereri
ENSCANG00000032760	CPSF1	99	90.833	ENSRNOG00000030705	Cpsf1	99	90.833	Rattus_norvegicus
ENSCANG00000032760	CPSF1	100	99.510	ENSRBIG00000044907	CPSF1	100	99.510	Rhinopithecus_bieti
ENSCANG00000032760	CPSF1	100	99.510	ENSRROG00000044861	CPSF1	100	99.510	Rhinopithecus_roxellana
ENSCANG00000032760	CPSF1	97	94.695	ENSSBOG00000027177	CPSF1	100	94.695	Saimiri_boliviensis_boliviensis
ENSCANG00000032760	CPSF1	100	87.500	ENSSHAG00000006500	CPSF1	99	87.953	Sarcophilus_harrisii
ENSCANG00000032760	CPSF1	100	82.407	ENSSFOG00015004606	cpsf1	100	78.478	Scleropages_formosus
ENSCANG00000032760	CPSF1	100	81.019	ENSSMAG00000020547	cpsf1	98	75.173	Scophthalmus_maximus
ENSCANG00000032760	CPSF1	100	80.556	ENSSDUG00000001100	cpsf1	96	77.642	Seriola_dumerili
ENSCANG00000032760	CPSF1	100	80.556	ENSSLDG00000003619	cpsf1	96	77.698	Seriola_lalandi_dorsalis
ENSCANG00000032760	CPSF1	86	88.691	ENSSARG00000003643	CPSF1	88	88.691	Sorex_araneus
ENSCANG00000032760	CPSF1	100	88.725	ENSSPUG00000014396	CPSF1	100	88.725	Sphenodon_punctatus
ENSCANG00000032760	CPSF1	100	80.556	ENSSPAG00000005349	cpsf1	98	75.536	Stegastes_partitus
ENSCANG00000032760	CPSF1	99	90.503	ENSSSCG00000005906	CPSF1	99	90.503	Sus_scrofa
ENSCANG00000032760	CPSF1	100	77.315	ENSTRUG00000013134	cpsf1	99	75.279	Takifugu_rubripes
ENSCANG00000032760	CPSF1	100	76.606	ENSTNIG00000014027	cpsf1	98	75.949	Tetraodon_nigroviridis
ENSCANG00000032760	CPSF1	75	93.832	ENSTBEG00000001756	CPSF1	90	93.832	Tupaia_belangeri
ENSCANG00000032760	CPSF1	100	88.889	ENSTTRG00000001937	CPSF1	87	93.610	Tursiops_truncatus
ENSCANG00000032760	CPSF1	97	92.847	ENSUAMG00000006476	CPSF1	98	92.847	Ursus_americanus
ENSCANG00000032760	CPSF1	67	54.967	ENSVPAG00000000157	-	50	93.991	Vicugna_pacos
ENSCANG00000032760	CPSF1	100	94.118	ENSVVUG00000005940	-	100	94.118	Vulpes_vulpes
ENSCANG00000032760	CPSF1	100	76.389	ENSXCOG00000003608	cpsf1	96	75.793	Xiphophorus_couchianus
ENSCANG00000032760	CPSF1	100	76.852	ENSXMAG00000005798	cpsf1	96	75.305	Xiphophorus_maculatus