EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000032892 (Gene tree)
Gene ID: 105517102
Gene Symbol: SLIRP
Alias: C14orf156|DC50
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Minus strand
Length: 12313 bases
Position: chrKN981601.1:16089438-16101750
Accession: 105517102
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000018893	RRM_1	PF00076.22	3.2e-13	1	1
ENSCANP00000018898	RRM_1	PF00076.22	4.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000041858	SLIRP-202	418	XM_011949481	ENSCANP00000018898	107 (aa)	XP_011804871	A0A2K5IQB7
ENSCANT00000041853	SLIRP-201	868	XM_011949484	ENSCANP00000018893	98 (aa)	XP_011804874	A0A2K5IQA7

Gene Model

Click here to download ENSCANG00000032892's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000032892's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000032892	SLIRP	93	31.633	ENSCANG00000036414	MSI2	57	34.667
ENSCANG00000032892	SLIRP	66	32.308	ENSCANG00000028734	HNRNPA2B1	50	32.308

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000032892	SLIRP	86	82.143	ENSG00000119705	SLIRP	97	82.432	Homo_sapiens
ENSCANG00000032892	SLIRP	68	61.194	ENSAPOG00000001298	slirp	67	61.194	Acanthochromis_polyacanthus
ENSCANG00000032892	SLIRP	91	80.899	ENSAMEG00000003975	SLIRP	82	81.333	Ailuropoda_melanoleuca
ENSCANG00000032892	SLIRP	68	62.687	ENSACIG00000023083	slirp	66	62.687	Amphilophus_citrinellus
ENSCANG00000032892	SLIRP	68	61.194	ENSAOCG00000006342	slirp	68	61.194	Amphiprion_ocellaris
ENSCANG00000032892	SLIRP	69	60.294	ENSAPEG00000015719	-	68	61.194	Amphiprion_percula
ENSCANG00000032892	SLIRP	69	60.294	ENSAPEG00000015917	slirp	68	61.194	Amphiprion_percula
ENSCANG00000032892	SLIRP	68	59.701	ENSATEG00000013525	slirp	67	59.701	Anabas_testudineus
ENSCANG00000032892	SLIRP	66	61.538	ENSAMXG00000018693	slirp	67	59.701	Astyanax_mexicanus
ENSCANG00000032892	SLIRP	100	83.673	ENSCJAG00000016946	SLIRP	84	88.462	Callithrix_jacchus
ENSCANG00000032892	SLIRP	90	79.545	ENSCAFG00020015876	-	72	76.250	Canis_lupus_dingo
ENSCANG00000032892	SLIRP	97	80.000	ENSCCAG00000030130	SLIRP	69	86.486	Cebus_capucinus
ENSCANG00000032892	SLIRP	100	94.898	ENSCATG00000036327	SLIRP	86	96.429	Cercocebus_atys
ENSCANG00000032892	SLIRP	91	94.382	ENSCSAG00000011736	SLIRP	69	94.667	Chlorocebus_sabaeus
ENSCANG00000032892	SLIRP	68	62.687	ENSCPBG00000026327	SLIRP	68	62.687	Chrysemys_picta_bellii
ENSCANG00000032892	SLIRP	90	73.864	ENSCGRG00001024068	Slirp	62	81.159	Cricetulus_griseus_chok1gshd
ENSCANG00000032892	SLIRP	90	73.864	ENSCGRG00000017440	Slirp	62	81.159	Cricetulus_griseus_crigri
ENSCANG00000032892	SLIRP	88	48.837	ENSCSEG00000015766	slirp	71	54.286	Cynoglossus_semilaevis
ENSCANG00000032892	SLIRP	68	65.672	ENSCVAG00000012504	slirp	66	65.672	Cyprinodon_variegatus
ENSCANG00000032892	SLIRP	69	61.765	ENSDARG00000097753	slirp	65	62.687	Danio_rerio
ENSCANG00000032892	SLIRP	71	67.143	ENSDNOG00000007721	SLIRP	64	67.143	Dasypus_novemcinctus
ENSCANG00000032892	SLIRP	90	72.727	ENSDORG00000012379	Slirp	67	75.676	Dipodomys_ordii
ENSCANG00000032892	SLIRP	79	64.935	ENSETEG00000010345	SLIRP	76	61.446	Echinops_telfairi
ENSCANG00000032892	SLIRP	90	81.818	ENSEASG00005020193	SLIRP	67	82.432	Equus_asinus_asinus
ENSCANG00000032892	SLIRP	92	57.778	ENSEEUG00000007257	SLIRP	71	65.278	Erinaceus_europaeus
ENSCANG00000032892	SLIRP	66	63.077	ENSELUG00000016800	slirp	65	62.121	Esox_lucius
ENSCANG00000032892	SLIRP	99	78.351	ENSFCAG00000036326	SLIRP	82	81.481	Felis_catus
ENSCANG00000032892	SLIRP	68	55.224	ENSFALG00000012583	SLIRP	63	55.224	Ficedula_albicollis
ENSCANG00000032892	SLIRP	91	67.021	ENSFDAG00000008347	SLIRP	62	74.286	Fukomys_damarensis
ENSCANG00000032892	SLIRP	56	65.455	ENSFHEG00000004709	slirp	68	60.938	Fundulus_heteroclitus
ENSCANG00000032892	SLIRP	79	57.143	ENSGMOG00000016948	slirp	73	57.143	Gadus_morhua
ENSCANG00000032892	SLIRP	80	52.564	ENSGALG00000031238	SLIRP	71	56.716	Gallus_gallus
ENSCANG00000032892	SLIRP	71	64.286	ENSGAFG00000010998	slirp	70	64.286	Gambusia_affinis
ENSCANG00000032892	SLIRP	69	60.294	ENSGACG00000020137	slirp	79	60.294	Gasterosteus_aculeatus
ENSCANG00000032892	SLIRP	79	59.740	ENSGAGG00000009953	SLIRP	53	59.740	Gopherus_agassizii
ENSCANG00000032892	SLIRP	86	82.143	ENSGGOG00000011059	-	85	84.810	Gorilla_gorilla
ENSCANG00000032892	SLIRP	90	64.773	ENSHGLG00000018491	SLIRP	67	64.865	Heterocephalus_glaber_female
ENSCANG00000032892	SLIRP	90	64.773	ENSHGLG00100014153	SLIRP	67	64.865	Heterocephalus_glaber_male
ENSCANG00000032892	SLIRP	68	64.179	ENSHCOG00000006795	slirp	69	63.235	Hippocampus_comes
ENSCANG00000032892	SLIRP	66	63.077	ENSIPUG00000010214	SLIRP	75	57.895	Ictalurus_punctatus
ENSCANG00000032892	SLIRP	80	78.205	ENSSTOG00000034316	SLIRP	65	81.944	Ictidomys_tridecemlineatus
ENSCANG00000032892	SLIRP	79	48.052	ENSKMAG00000002038	slirp	72	48.684	Kryptolebias_marmoratus
ENSCANG00000032892	SLIRP	68	58.209	ENSLBEG00000007564	slirp	67	58.209	Labrus_bergylta
ENSCANG00000032892	SLIRP	71	61.429	ENSLACG00000013434	SLIRP	66	62.319	Latimeria_chalumnae
ENSCANG00000032892	SLIRP	94	93.478	ENSMFAG00000042960	SLIRP	86	96.429	Macaca_fascicularis
ENSCANG00000032892	SLIRP	94	94.565	ENSMMUG00000029256	SLIRP	86	96.429	Macaca_mulatta
ENSCANG00000032892	SLIRP	94	93.478	ENSMNEG00000028921	SLIRP	86	96.429	Macaca_nemestrina
ENSCANG00000032892	SLIRP	100	94.898	ENSMLEG00000043644	SLIRP	86	96.429	Mandrillus_leucophaeus
ENSCANG00000032892	SLIRP	68	64.179	ENSMZEG00005004617	slirp	68	64.179	Maylandia_zebra
ENSCANG00000032892	SLIRP	90	76.136	ENSMAUG00000003857	Slirp	62	82.609	Mesocricetus_auratus
ENSCANG00000032892	SLIRP	97	71.579	ENSMICG00000012080	SLIRP	70	74.667	Microcebus_murinus
ENSCANG00000032892	SLIRP	90	77.273	ENSMOCG00000016019	Slirp	68	86.957	Microtus_ochrogaster
ENSCANG00000032892	SLIRP	68	59.701	ENSMMOG00000018268	slirp	67	59.701	Mola_mola
ENSCANG00000032892	SLIRP	70	62.319	ENSMODG00000005207	-	97	62.319	Monodelphis_domestica
ENSCANG00000032892	SLIRP	68	62.687	ENSMALG00000012581	slirp	68	62.687	Monopterus_albus
ENSCANG00000032892	SLIRP	90	75.000	MGP_CAROLIEiJ_G0017995	Slirp	69	78.378	Mus_caroli
ENSCANG00000032892	SLIRP	90	76.136	ENSMUSG00000021040	Slirp	72	83.099	Mus_musculus
ENSCANG00000032892	SLIRP	90	76.136	MGP_SPRETEiJ_G0018840	Slirp	63	83.099	Mus_spretus
ENSCANG00000032892	SLIRP	79	72.727	ENSMLUG00000029544	-	64	77.465	Myotis_lucifugus
ENSCANG00000032892	SLIRP	72	76.056	ENSMLUG00000024998	-	64	76.056	Myotis_lucifugus
ENSCANG00000032892	SLIRP	90	71.591	ENSNGAG00000016363	Slirp	66	79.710	Nannospalax_galili
ENSCANG00000032892	SLIRP	86	75.000	ENSNLEG00000027238	-	89	75.641	Nomascus_leucogenys
ENSCANG00000032892	SLIRP	100	80.612	ENSNLEG00000032459	-	84	82.051	Nomascus_leucogenys
ENSCANG00000032892	SLIRP	91	79.775	ENSODEG00000012580	SLIRP	80	82.432	Octodon_degus
ENSCANG00000032892	SLIRP	68	64.179	ENSONIG00000011692	slirp	68	64.179	Oreochromis_niloticus
ENSCANG00000032892	SLIRP	90	57.955	ENSOANG00000022366	SLIRP	62	69.565	Ornithorhynchus_anatinus
ENSCANG00000032892	SLIRP	68	61.194	ENSORLG00000010761	slirp	52	61.194	Oryzias_latipes
ENSCANG00000032892	SLIRP	68	62.687	ENSORLG00020022188	slirp	67	62.687	Oryzias_latipes_hni
ENSCANG00000032892	SLIRP	90	52.273	ENSORLG00015020171	slirp	66	61.194	Oryzias_latipes_hsok
ENSCANG00000032892	SLIRP	68	62.687	ENSOMEG00000019321	slirp	67	62.687	Oryzias_melastigma
ENSCANG00000032892	SLIRP	86	80.952	ENSPPAG00000040710	-	85	84.810	Pan_paniscus
ENSCANG00000032892	SLIRP	99	79.381	ENSPPRG00000014350	SLIRP	82	82.716	Panthera_pardus
ENSCANG00000032892	SLIRP	99	79.381	ENSPTIG00000014196	SLIRP	82	82.716	Panthera_tigris_altaica
ENSCANG00000032892	SLIRP	86	80.952	ENSPTRG00000030691	SLIRP	85	84.810	Pan_troglodytes
ENSCANG00000032892	SLIRP	100	95.918	ENSPANG00000026323	SLIRP	86	97.619	Papio_anubis
ENSCANG00000032892	SLIRP	59	56.897	ENSPKIG00000008831	slirp	57	56.897	Paramormyrops_kingsleyae
ENSCANG00000032892	SLIRP	68	70.149	ENSPMGG00000010541	slirp	77	70.149	Periophthalmus_magnuspinnatus
ENSCANG00000032892	SLIRP	80	71.795	ENSPEMG00000013234	Slirp	70	77.465	Peromyscus_maniculatus_bairdii
ENSCANG00000032892	SLIRP	61	55.000	ENSPMAG00000009355	slirp	67	55.000	Petromyzon_marinus
ENSCANG00000032892	SLIRP	90	54.545	ENSPCIG00000026842	-	75	60.000	Phascolarctos_cinereus
ENSCANG00000032892	SLIRP	68	62.687	ENSPFOG00000006758	slirp	67	62.687	Poecilia_formosa
ENSCANG00000032892	SLIRP	68	62.687	ENSPLAG00000011140	slirp	67	62.687	Poecilia_latipinna
ENSCANG00000032892	SLIRP	68	62.687	ENSPMEG00000019535	slirp	67	62.687	Poecilia_mexicana
ENSCANG00000032892	SLIRP	70	60.870	ENSPREG00000011673	slirp	67	62.687	Poecilia_reticulata
ENSCANG00000032892	SLIRP	82	79.545	ENSPPYG00000006030	SLIRP	68	79.730	Pongo_abelii
ENSCANG00000032892	SLIRP	91	74.157	ENSPCOG00000015159	SLIRP	70	76.000	Propithecus_coquereli
ENSCANG00000032892	SLIRP	68	70.149	ENSPNAG00000008633	slirp	68	70.149	Pygocentrus_nattereri
ENSCANG00000032892	SLIRP	100	97.959	ENSRBIG00000032222	-	100	97.959	Rhinopithecus_bieti
ENSCANG00000032892	SLIRP	87	86.667	ENSRBIG00000032998	-	78	90.476	Rhinopithecus_bieti
ENSCANG00000032892	SLIRP	91	89.888	ENSRBIG00000035817	-	83	89.888	Rhinopithecus_bieti
ENSCANG00000032892	SLIRP	88	96.512	ENSRBIG00000031396	-	86	96.512	Rhinopithecus_bieti
ENSCANG00000032892	SLIRP	94	92.632	ENSRROG00000017133	-	85	93.902	Rhinopithecus_roxellana
ENSCANG00000032892	SLIRP	100	96.939	ENSRROG00000036656	-	100	96.939	Rhinopithecus_roxellana
ENSCANG00000032892	SLIRP	83	94.382	ENSRROG00000041312	-	74	94.667	Rhinopithecus_roxellana
ENSCANG00000032892	SLIRP	88	97.674	ENSRROG00000035604	-	86	97.674	Rhinopithecus_roxellana
ENSCANG00000032892	SLIRP	100	80.612	ENSSBOG00000020014	SLIRP	82	88.158	Saimiri_boliviensis_boliviensis
ENSCANG00000032892	SLIRP	68	61.194	ENSSFOG00015011165	slirp	68	61.194	Scleropages_formosus
ENSCANG00000032892	SLIRP	89	44.828	ENSSMAG00000012930	slirp	65	50.000	Scophthalmus_maximus
ENSCANG00000032892	SLIRP	68	65.672	ENSSLDG00000023136	slirp	68	61.842	Seriola_lalandi_dorsalis
ENSCANG00000032892	SLIRP	82	59.259	ENSSPUG00000009346	SLIRP	68	62.687	Sphenodon_punctatus
ENSCANG00000032892	SLIRP	68	58.209	ENSSPAG00000013477	slirp	67	58.209	Stegastes_partitus
ENSCANG00000032892	SLIRP	90	76.136	ENSSSCG00000028167	SLIRP	67	79.730	Sus_scrofa
ENSCANG00000032892	SLIRP	71	53.947	ENSTGUG00000012337	SLIRP	63	56.716	Taeniopygia_guttata
ENSCANG00000032892	SLIRP	90	48.315	ENSTRUG00000020127	slirp	67	57.353	Takifugu_rubripes
ENSCANG00000032892	SLIRP	90	80.682	ENSUAMG00000022445	SLIRP	67	81.081	Ursus_americanus
ENSCANG00000032892	SLIRP	90	80.682	ENSUMAG00000007166	SLIRP	67	81.081	Ursus_maritimus
ENSCANG00000032892	SLIRP	90	76.136	ENSVPAG00000001781	SLIRP	69	78.378	Vicugna_pacos
ENSCANG00000032892	SLIRP	85	75.904	ENSVVUG00000004436	SLIRP	67	82.432	Vulpes_vulpes
ENSCANG00000032892	SLIRP	68	65.672	ENSXETG00000030343	SLIRP	75	65.672	Xenopus_tropicalis
ENSCANG00000032892	SLIRP	70	62.319	ENSXCOG00000009422	slirp	69	62.319	Xiphophorus_couchianus
ENSCANG00000032892	SLIRP	70	63.768	ENSXMAG00000015655	slirp	69	63.768	Xiphophorus_maculatus