EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000032904 (Gene tree)
Gene ID: 105527770
Gene Symbol: -
Alias: -
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 3F
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Minus strand
Length: 12349 bases
Position: chrKN985306.1:2352005-2364353
Accession: 105527770
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000018923	APOBEC_N	PF08210.11	1.6e-105	1	2
ENSCANP00000018923	APOBEC_N	PF08210.11	1.6e-105	2	2
ENSCANP00000018923	APOBEC_C	PF05240.14	1e-65	1	2
ENSCANP00000018923	APOBEC_C	PF05240.14	1e-65	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000041883	-	1739	XM_011964207	ENSCANP00000018923	373 (aa)	XP_011819597	A0A2K5IQE0
ENSCANT00000041884	-	509	XM_011964208	ENSCANP00000018924	102 (aa)	XP_011819598	A0A2K5IQF1

Gene Model

Click here to download ENSCANG00000032904's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000032904's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000032904	-	95	42.458	ENSCANG00000035131	AICDA	88	42.458
ENSCANG00000032904	-	98	91.848	ENSCANG00000033269	-	99	91.848
ENSCANG00000032904	-	98	46.640	ENSCANG00000029968	-	77	46.640
ENSCANG00000032904	-	100	86.450	ENSCANG00000031957	-	99	86.450
ENSCANG00000032904	-	99	34.000	ENSCANG00000035072	APOBEC2	88	34.000
ENSCANG00000032904	-	95	42.246	ENSCANG00000030513	-	94	42.246
ENSCANG00000032904	-	100	76.344	ENSCANG00000039177	APOBEC3C	100	76.344

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000032904	-	100	77.957	ENSG00000244509	APOBEC3C	100	77.957	Homo_sapiens
ENSCANG00000032904	-	100	88.204	ENSG00000128394	APOBEC3F	100	88.204	Homo_sapiens
ENSCANG00000032904	-	100	78.495	ENSG00000243811	APOBEC3D	100	78.495	Homo_sapiens
ENSCANG00000032904	-	100	70.430	ENSANAG00000030088	-	98	70.430	Aotus_nancymaae
ENSCANG00000032904	-	70	68.182	ENSCJAG00000015317	-	100	68.182	Callithrix_jacchus
ENSCANG00000032904	-	99	47.594	ENSCAFG00020002615	-	99	47.594	Canis_lupus_dingo
ENSCANG00000032904	-	97	58.152	ENSTSYG00000028254	-	99	58.152	Carlito_syrichta
ENSCANG00000032904	-	98	54.496	ENSTSYG00000034260	-	98	54.496	Carlito_syrichta
ENSCANG00000032904	-	97	52.198	ENSTSYG00000030036	-	99	52.198	Carlito_syrichta
ENSCANG00000032904	-	99	68.817	ENSCCAG00000030932	-	84	68.817	Cebus_capucinus
ENSCANG00000032904	-	100	76.344	ENSCATG00000043226	APOBEC3C	100	76.344	Cercocebus_atys
ENSCANG00000032904	-	98	92.935	ENSCATG00000033502	-	95	92.935	Cercocebus_atys
ENSCANG00000032904	-	100	74.731	ENSCSAG00000006402	APOBEC3C	100	74.731	Chlorocebus_sabaeus
ENSCANG00000032904	-	100	84.225	ENSCSAG00000006382	APOBEC3F	100	84.225	Chlorocebus_sabaeus
ENSCANG00000032904	-	95	34.615	ENSDNOG00000044642	-	98	34.615	Dasypus_novemcinctus
ENSCANG00000032904	-	99	47.959	ENSEASG00005018641	-	97	47.959	Equus_asinus_asinus
ENSCANG00000032904	-	99	49.730	ENSECAG00000006071	-	100	44.536	Equus_caballus
ENSCANG00000032904	-	100	88.472	ENSGGOG00000038678	APOBEC3F	100	88.472	Gorilla_gorilla
ENSCANG00000032904	-	100	77.419	ENSGGOG00000036587	-	100	77.419	Gorilla_gorilla
ENSCANG00000032904	-	99	44.624	ENSHGLG00000017315	-	91	44.624	Heterocephalus_glaber_female
ENSCANG00000032904	-	99	44.624	ENSHGLG00100003105	-	94	44.624	Heterocephalus_glaber_male
ENSCANG00000032904	-	100	74.731	ENSMFAG00000016792	APOBEC3C	100	74.731	Macaca_fascicularis
ENSCANG00000032904	-	100	91.153	ENSMFAG00000004037	APOBEC3F	100	91.153	Macaca_fascicularis
ENSCANG00000032904	-	100	78.342	ENSMFAG00000002331	-	100	78.342	Macaca_fascicularis
ENSCANG00000032904	-	100	91.033	ENSMMUG00000004017	APOBEC3F	99	90.786	Macaca_mulatta
ENSCANG00000032904	-	98	76.630	ENSMMUG00000004018	APOBEC3C	95	76.630	Macaca_mulatta
ENSCANG00000032904	-	100	81.769	ENSMNEG00000043316	APOBEC3D	100	81.769	Macaca_nemestrina
ENSCANG00000032904	-	100	74.194	ENSMNEG00000045196	APOBEC3C	100	74.194	Macaca_nemestrina
ENSCANG00000032904	-	100	76.344	ENSMLEG00000036992	APOBEC3C	100	76.344	Mandrillus_leucophaeus
ENSCANG00000032904	-	100	93.566	ENSMLEG00000029642	APOBEC3F	100	93.566	Mandrillus_leucophaeus
ENSCANG00000032904	-	98	55.676	ENSMICG00000042615	-	88	55.676	Microcebus_murinus
ENSCANG00000032904	-	99	46.497	ENSMLUG00000023676	-	99	46.497	Myotis_lucifugus
ENSCANG00000032904	-	100	68.653	ENSNLEG00000035811	-	100	68.653	Nomascus_leucogenys
ENSCANG00000032904	-	100	74.731	ENSNLEG00000028392	APOBEC3C	100	74.731	Nomascus_leucogenys
ENSCANG00000032904	-	98	45.604	ENSOGAG00000033404	-	100	45.604	Otolemur_garnettii
ENSCANG00000032904	-	99	43.501	ENSOGAG00000030300	-	99	43.501	Otolemur_garnettii
ENSCANG00000032904	-	99	44.386	ENSOGAG00000032498	-	99	44.386	Otolemur_garnettii
ENSCANG00000032904	-	100	77.957	ENSPPAG00000014118	APOBEC3C	100	77.957	Pan_paniscus
ENSCANG00000032904	-	100	78.495	ENSPPAG00000028218	-	100	78.495	Pan_paniscus
ENSCANG00000032904	-	99	49.730	ENSPPRG00000003726	-	99	49.730	Panthera_pardus
ENSCANG00000032904	-	100	77.957	ENSPTRG00000041588	APOBEC3D	100	77.957	Pan_troglodytes
ENSCANG00000032904	-	100	89.276	ENSPTRG00000014385	APOBEC3C	100	89.276	Pan_troglodytes
ENSCANG00000032904	-	100	93.370	ENSPANG00000010775	APOBEC3F	100	93.370	Papio_anubis
ENSCANG00000032904	-	100	74.194	ENSPPYG00000011832	APOBEC3C	100	74.194	Pongo_abelii
ENSCANG00000032904	-	68	58.915	ENSPCOG00000022067	-	98	58.915	Propithecus_coquereli
ENSCANG00000032904	-	69	60.800	ENSPCOG00000018072	-	100	60.800	Propithecus_coquereli
ENSCANG00000032904	-	81	50.407	ENSPVAG00000009461	-	71	50.407	Pteropus_vampyrus
ENSCANG00000032904	-	100	95.856	ENSRBIG00000030323	-	100	95.856	Rhinopithecus_bieti
ENSCANG00000032904	-	100	88.472	ENSRBIG00000042297	-	100	96.815	Rhinopithecus_bieti
ENSCANG00000032904	-	100	75.773	ENSRBIG00000030834	-	100	75.773	Rhinopithecus_bieti
ENSCANG00000032904	-	100	88.204	ENSRROG00000029996	-	100	88.204	Rhinopithecus_roxellana
ENSCANG00000032904	-	100	77.273	ENSRROG00000028557	-	100	77.273	Rhinopithecus_roxellana
ENSCANG00000032904	-	100	94.370	ENSRROG00000029045	APOBEC3C	100	94.370	Rhinopithecus_roxellana
ENSCANG00000032904	-	100	69.892	ENSSBOG00000032780	-	100	70.261	Saimiri_boliviensis_boliviensis
ENSCANG00000032904	-	97	48.619	ENSUAMG00000004433	-	100	48.619	Ursus_americanus
ENSCANG00000032904	-	99	49.189	ENSUMAG00000014441	-	86	49.189	Ursus_maritimus
ENSCANG00000032904	-	77	51.007	ENSVVUG00000014628	-	91	50.685	Vulpes_vulpes