EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000033240 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: lupus La protein pseudogene
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 1224 bases
Position: chrKN981791.1:1055666-1056889
Accession: 105518317
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000019622	RRM_1	PF00076.22	6.1e-12	1	1
ENSCANP00000019622	RRM_3	PF08777.11	1.8e-30	1	1
ENSCANP00000019622	La	PF05383.17	8.7e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000042586	-	1143	-	ENSCANP00000019622	380 (aa)	-	A0A2K5IT13

Gene Model

Click here to download ENSCANG00000033240's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000033240's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000033240	-	98	69.565	ENSCANG00000028838	-	95	69.565
ENSCANG00000033240	-	100	83.210	ENSCANG00000027695	SSB	100	83.210

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000033240	-	100	83.088	ENSG00000138385	SSB	100	83.333	Homo_sapiens
ENSCANG00000033240	-	94	49.482	ENSAPOG00000003448	ssb	99	50.000	Acanthochromis_polyacanthus
ENSCANG00000033240	-	100	77.857	ENSAMEG00000010507	SSB	100	77.857	Ailuropoda_melanoleuca
ENSCANG00000033240	-	92	50.667	ENSACIG00000001738	ssb	97	51.200	Amphilophus_citrinellus
ENSCANG00000033240	-	94	50.000	ENSAOCG00000020398	ssb	99	50.256	Amphiprion_ocellaris
ENSCANG00000033240	-	94	50.518	ENSAPEG00000020395	ssb	99	50.769	Amphiprion_percula
ENSCANG00000033240	-	99	50.370	ENSATEG00000016884	ssb	100	50.370	Anabas_testudineus
ENSCANG00000033240	-	100	61.792	ENSAPLG00000006109	SSB	100	61.792	Anas_platyrhynchos
ENSCANG00000033240	-	100	57.317	ENSACAG00000017008	SSB	99	57.561	Anolis_carolinensis
ENSCANG00000033240	-	100	74.815	ENSANAG00000027195	-	100	74.815	Aotus_nancymaae
ENSCANG00000033240	-	99	48.387	ENSACLG00000010798	ssb	100	48.883	Astatotilapia_calliptera
ENSCANG00000033240	-	98	49.265	ENSAMXG00000012606	ssb	100	50.000	Astyanax_mexicanus
ENSCANG00000033240	-	100	79.753	ENSBTAG00000008716	SSB	100	79.753	Bos_taurus
ENSCANG00000033240	-	72	34.323	WBGene00016653	C44E4.4	85	31.176	Caenorhabditis_elegans
ENSCANG00000033240	-	100	82.222	ENSCJAG00000045073	SSB	100	82.222	Callithrix_jacchus
ENSCANG00000033240	-	100	80.049	ENSCAFG00000012418	SSB	100	80.049	Canis_familiaris
ENSCANG00000033240	-	100	80.049	ENSCAFG00020002900	SSB	100	80.049	Canis_lupus_dingo
ENSCANG00000033240	-	100	76.485	ENSCHIG00000022196	-	100	76.485	Capra_hircus
ENSCANG00000033240	-	100	79.753	ENSCHIG00000022624	-	100	79.753	Capra_hircus
ENSCANG00000033240	-	100	81.235	ENSTSYG00000000097	SSB	100	81.235	Carlito_syrichta
ENSCANG00000033240	-	100	81.235	ENSCPOG00000003338	SSB	100	81.235	Cavia_porcellus
ENSCANG00000033240	-	100	82.963	ENSCCAG00000035147	SSB	100	82.963	Cebus_capucinus
ENSCANG00000033240	-	100	71.129	ENSCATG00000042909	-	100	71.129	Cercocebus_atys
ENSCANG00000033240	-	100	68.010	ENSCATG00000036701	SSB	100	68.010	Cercocebus_atys
ENSCANG00000033240	-	100	80.494	ENSCLAG00000015617	-	100	80.494	Chinchilla_lanigera
ENSCANG00000033240	-	100	83.210	ENSCSAG00000015200	SSB	89	83.210	Chlorocebus_sabaeus
ENSCANG00000033240	-	98	89.822	ENSCSAG00000018390	-	100	89.822	Chlorocebus_sabaeus
ENSCANG00000033240	-	100	79.506	ENSCHOG00000007763	SSB	100	79.506	Choloepus_hoffmanni
ENSCANG00000033240	-	100	67.237	ENSCPBG00000006519	SSB	100	67.971	Chrysemys_picta_bellii
ENSCANG00000033240	-	100	67.726	ENSCGRG00001024831	Ssb	100	68.949	Cricetulus_griseus_chok1gshd
ENSCANG00000033240	-	100	67.726	ENSCGRG00000005387	Ssb	100	68.949	Cricetulus_griseus_crigri
ENSCANG00000033240	-	98	49.123	ENSCSEG00000011599	ssb	99	49.373	Cynoglossus_semilaevis
ENSCANG00000033240	-	99	49.261	ENSCVAG00000021558	ssb	100	49.507	Cyprinodon_variegatus
ENSCANG00000033240	-	98	51.365	ENSDARG00000029252	ssb	99	51.852	Danio_rerio
ENSCANG00000033240	-	100	79.506	ENSDNOG00000013450	SSB	100	79.506	Dasypus_novemcinctus
ENSCANG00000033240	-	100	71.463	ENSDORG00000005543	Ssb	100	71.463	Dipodomys_ordii
ENSCANG00000033240	-	83	31.965	FBgn0011638	La	92	32.603	Drosophila_melanogaster
ENSCANG00000033240	-	56	73.134	ENSETEG00000004614	-	61	73.134	Echinops_telfairi
ENSCANG00000033240	-	96	43.264	ENSEBUG00000001237	ssb	95	43.264	Eptatretus_burgeri
ENSCANG00000033240	-	99	81.592	ENSEASG00005022835	SSB	99	81.592	Equus_asinus_asinus
ENSCANG00000033240	-	100	81.235	ENSECAG00000018495	SSB	100	81.235	Equus_caballus
ENSCANG00000033240	-	74	61.765	ENSEEUG00000008077	SSB	78	61.765	Erinaceus_europaeus
ENSCANG00000033240	-	98	52.250	ENSELUG00000020929	ssb	100	53.202	Esox_lucius
ENSCANG00000033240	-	100	80.049	ENSFCAG00000011601	SSB	100	80.049	Felis_catus
ENSCANG00000033240	-	99	64.356	ENSFALG00000000930	SSB	99	64.516	Ficedula_albicollis
ENSCANG00000033240	-	100	80.494	ENSFDAG00000000598	SSB	100	80.494	Fukomys_damarensis
ENSCANG00000033240	-	61	49.430	ENSFHEG00000003268	ssb	96	46.645	Fundulus_heteroclitus
ENSCANG00000033240	-	97	48.515	ENSGMOG00000002664	ssb	99	48.762	Gadus_morhua
ENSCANG00000033240	-	99	65.594	ENSGALG00000009677	SSB	99	65.594	Gallus_gallus
ENSCANG00000033240	-	99	47.044	ENSGAFG00000002749	ssb	100	48.522	Gambusia_affinis
ENSCANG00000033240	-	99	47.689	ENSGACG00000005107	ssb	100	48.418	Gasterosteus_aculeatus
ENSCANG00000033240	-	100	66.504	ENSGAGG00000007807	SSB	100	67.482	Gopherus_agassizii
ENSCANG00000033240	-	64	87.097	ENSGGOG00000023471	-	100	87.097	Gorilla_gorilla
ENSCANG00000033240	-	99	80.362	ENSGGOG00000024891	-	99	80.362	Gorilla_gorilla
ENSCANG00000033240	-	99	47.643	ENSHBUG00000006584	ssb	100	48.139	Haplochromis_burtoni
ENSCANG00000033240	-	100	79.612	ENSHGLG00000017580	-	100	79.612	Heterocephalus_glaber_female
ENSCANG00000033240	-	100	77.444	ENSHGLG00000004478	-	100	77.444	Heterocephalus_glaber_female
ENSCANG00000033240	-	100	75.819	ENSHGLG00000005832	-	100	75.819	Heterocephalus_glaber_female
ENSCANG00000033240	-	100	79.612	ENSHGLG00100003084	-	100	79.612	Heterocephalus_glaber_male
ENSCANG00000033240	-	100	72.111	ENSHGLG00100008767	-	100	72.111	Heterocephalus_glaber_male
ENSCANG00000033240	-	97	46.970	ENSHCOG00000019011	ssb	99	47.727	Hippocampus_comes
ENSCANG00000033240	-	97	50.000	ENSIPUG00000003681	SSB	99	50.495	Ictalurus_punctatus
ENSCANG00000033240	-	100	80.741	ENSSTOG00000008416	SSB	100	80.741	Ictidomys_tridecemlineatus
ENSCANG00000033240	-	100	68.246	ENSJJAG00000023158	-	100	68.246	Jaculus_jaculus
ENSCANG00000033240	-	99	60.051	ENSJJAG00000016250	-	99	60.051	Jaculus_jaculus
ENSCANG00000033240	-	99	48.889	ENSKMAG00000017317	ssb	100	49.136	Kryptolebias_marmoratus
ENSCANG00000033240	-	98	47.382	ENSLBEG00000017345	ssb	100	47.654	Labrus_bergylta
ENSCANG00000033240	-	99	57.740	ENSLACG00000014056	SSB	99	60.539	Latimeria_chalumnae
ENSCANG00000033240	-	98	57.711	ENSLOCG00000007933	ssb	99	58.209	Lepisosteus_oculatus
ENSCANG00000033240	-	100	67.407	ENSLAFG00000028909	-	100	67.407	Loxodonta_africana
ENSCANG00000033240	-	73	62.838	ENSLAFG00000026721	-	99	62.838	Loxodonta_africana
ENSCANG00000033240	-	100	72.512	ENSLAFG00000000867	-	100	75.118	Loxodonta_africana
ENSCANG00000033240	-	88	90.991	ENSMFAG00000041478	-	100	90.991	Macaca_fascicularis
ENSCANG00000033240	-	100	83.457	ENSMFAG00000039066	SSB	100	83.457	Macaca_fascicularis
ENSCANG00000033240	-	100	83.457	ENSMMUG00000023051	SSB	100	83.457	Macaca_mulatta
ENSCANG00000033240	-	99	66.579	ENSMMUG00000039889	-	100	67.105	Macaca_mulatta
ENSCANG00000033240	-	100	91.623	ENSMMUG00000011724	-	97	91.623	Macaca_mulatta
ENSCANG00000033240	-	88	90.691	ENSMNEG00000034698	-	100	90.691	Macaca_nemestrina
ENSCANG00000033240	-	100	71.463	ENSMNEG00000028321	SSB	100	71.463	Macaca_nemestrina
ENSCANG00000033240	-	100	74.474	ENSMLEG00000042644	-	100	74.474	Mandrillus_leucophaeus
ENSCANG00000033240	-	100	83.457	ENSMLEG00000035717	SSB	100	83.457	Mandrillus_leucophaeus
ENSCANG00000033240	-	99	51.358	ENSMAMG00000004800	ssb	100	51.358	Mastacembelus_armatus
ENSCANG00000033240	-	99	48.387	ENSMZEG00005005749	ssb	100	48.883	Maylandia_zebra
ENSCANG00000033240	-	99	64.604	ENSMGAG00000010328	SSB	99	65.347	Meleagris_gallopavo
ENSCANG00000033240	-	99	82.090	ENSMICG00000028252	-	99	82.090	Microcebus_murinus
ENSCANG00000033240	-	98	82.677	ENSMICG00000033304	-	97	82.677	Microcebus_murinus
ENSCANG00000033240	-	100	65.700	ENSMODG00000008227	-	100	66.425	Monodelphis_domestica
ENSCANG00000033240	-	100	60.411	ENSMODG00000007027	-	100	60.411	Monodelphis_domestica
ENSCANG00000033240	-	100	63.496	ENSMODG00000019271	-	100	63.496	Monodelphis_domestica
ENSCANG00000033240	-	89	52.632	ENSMALG00000008045	ssb	90	52.139	Monopterus_albus
ENSCANG00000033240	-	100	67.143	MGP_CAROLIEiJ_G0023629	-	97	79.775	Mus_caroli
ENSCANG00000033240	-	100	66.429	ENSMUSG00000068882	Ssb	97	79.775	Mus_musculus
ENSCANG00000033240	-	100	66.667	MGP_PahariEiJ_G0025081	-	97	80.337	Mus_pahari
ENSCANG00000033240	-	100	66.429	MGP_SPRETEiJ_G0024551	Ssb	97	79.775	Mus_spretus
ENSCANG00000033240	-	100	80.494	ENSMPUG00000000785	SSB	100	80.494	Mustela_putorius_furo
ENSCANG00000033240	-	100	75.656	ENSMLUG00000016316	SSB	100	75.656	Myotis_lucifugus
ENSCANG00000033240	-	99	48.139	ENSNBRG00000012661	ssb	100	48.635	Neolamprologus_brichardi
ENSCANG00000033240	-	100	83.704	ENSNLEG00000004958	SSB	100	83.704	Nomascus_leucogenys
ENSCANG00000033240	-	100	63.317	ENSNLEG00000028754	-	100	64.160	Nomascus_leucogenys
ENSCANG00000033240	-	59	72.177	ENSMEUG00000001650	-	100	72.177	Notamacropus_eugenii
ENSCANG00000033240	-	72	61.034	ENSOPRG00000008475	-	100	61.724	Ochotona_princeps
ENSCANG00000033240	-	93	75.066	ENSODEG00000004202	-	100	75.066	Octodon_degus
ENSCANG00000033240	-	99	48.139	ENSONIG00000008776	ssb	100	48.642	Oreochromis_niloticus
ENSCANG00000033240	-	100	72.099	ENSOANG00000008543	SSB	100	72.099	Ornithorhynchus_anatinus
ENSCANG00000033240	-	100	80.494	ENSOCUG00000010396	SSB	100	80.494	Oryctolagus_cuniculus
ENSCANG00000033240	-	99	51.358	ENSORLG00000017208	ssb	100	51.358	Oryzias_latipes
ENSCANG00000033240	-	99	50.617	ENSORLG00020022574	ssb	100	51.111	Oryzias_latipes_hni
ENSCANG00000033240	-	99	50.864	ENSORLG00015016592	ssb	100	51.111	Oryzias_latipes_hsok
ENSCANG00000033240	-	98	50.000	ENSOMEG00000003193	ssb	100	52.099	Oryzias_melastigma
ENSCANG00000033240	-	100	76.066	ENSOGAG00000029768	SSB	100	76.066	Otolemur_garnettii
ENSCANG00000033240	-	100	79.259	ENSOARG00000002906	SSB	100	79.259	Ovis_aries
ENSCANG00000033240	-	97	64.975	ENSPPAG00000006189	-	97	65.482	Pan_paniscus
ENSCANG00000033240	-	100	83.088	ENSPPAG00000042673	SSB	100	83.088	Pan_paniscus
ENSCANG00000033240	-	99	81.250	ENSPPAG00000032427	-	100	86.992	Pan_paniscus
ENSCANG00000033240	-	100	80.049	ENSPPRG00000006599	SSB	100	80.049	Panthera_pardus
ENSCANG00000033240	-	100	79.803	ENSPTIG00000011021	SSB	97	79.803	Panthera_tigris_altaica
ENSCANG00000033240	-	100	83.088	ENSPTRG00000012620	SSB	100	83.088	Pan_troglodytes
ENSCANG00000033240	-	99	77.083	ENSPTRG00000042880	-	99	77.083	Pan_troglodytes
ENSCANG00000033240	-	100	83.457	ENSPANG00000007440	SSB	100	83.457	Papio_anubis
ENSCANG00000033240	-	98	71.850	ENSPANG00000031877	-	95	71.850	Papio_anubis
ENSCANG00000033240	-	100	66.154	ENSPANG00000034126	-	100	66.154	Papio_anubis
ENSCANG00000033240	-	99	54.726	ENSPKIG00000019325	ssb	100	55.419	Paramormyrops_kingsleyae
ENSCANG00000033240	-	100	65.770	ENSPSIG00000002265	SSB	93	66.259	Pelodiscus_sinensis
ENSCANG00000033240	-	78	49.538	ENSPMGG00000020075	ssb	92	47.851	Periophthalmus_magnuspinnatus
ENSCANG00000033240	-	80	45.988	ENSPMAG00000002982	ssb	89	43.915	Petromyzon_marinus
ENSCANG00000033240	-	100	70.443	ENSPCIG00000028591	-	100	70.443	Phascolarctos_cinereus
ENSCANG00000033240	-	99	48.030	ENSPFOG00000009650	ssb	100	49.261	Poecilia_formosa
ENSCANG00000033240	-	99	47.654	ENSPLAG00000020498	ssb	100	49.015	Poecilia_latipinna
ENSCANG00000033240	-	99	48.030	ENSPMEG00000001051	ssb	100	49.015	Poecilia_mexicana
ENSCANG00000033240	-	93	48.438	ENSPREG00000003708	ssb	99	49.740	Poecilia_reticulata
ENSCANG00000033240	-	100	83.704	ENSPPYG00000012919	SSB	100	83.704	Pongo_abelii
ENSCANG00000033240	-	94	74.674	ENSPCAG00000010276	SSB	100	74.674	Procavia_capensis
ENSCANG00000033240	-	100	79.012	ENSPCOG00000015741	-	100	79.012	Propithecus_coquereli
ENSCANG00000033240	-	100	76.864	ENSPCOG00000023189	-	100	76.864	Propithecus_coquereli
ENSCANG00000033240	-	87	79.037	ENSPVAG00000006615	SSB	100	79.037	Pteropus_vampyrus
ENSCANG00000033240	-	99	48.387	ENSPNYG00000006444	ssb	100	48.883	Pundamilia_nyererei
ENSCANG00000033240	-	98	50.493	ENSPNAG00000011708	ssb	100	50.971	Pygocentrus_nattereri
ENSCANG00000033240	-	100	67.813	ENSRNOG00000011606	AABR07061825.1	100	67.813	Rattus_norvegicus
ENSCANG00000033240	-	100	66.905	ENSRNOG00000007998	Ssb	100	66.905	Rattus_norvegicus
ENSCANG00000033240	-	100	65.578	ENSRBIG00000029918	-	100	65.578	Rhinopithecus_bieti
ENSCANG00000033240	-	85	77.077	ENSRBIG00000041608	-	95	77.077	Rhinopithecus_bieti
ENSCANG00000033240	-	93	94.068	ENSRBIG00000041232	-	98	94.068	Rhinopithecus_bieti
ENSCANG00000033240	-	100	73.846	ENSRBIG00000041972	SSB	100	74.103	Rhinopithecus_bieti
ENSCANG00000033240	-	100	83.210	ENSRROG00000040346	SSB	100	83.210	Rhinopithecus_roxellana
ENSCANG00000033240	-	100	72.111	ENSRROG00000007149	-	100	72.111	Rhinopithecus_roxellana
ENSCANG00000033240	-	98	94.340	ENSRROG00000031684	-	100	94.340	Rhinopithecus_roxellana
ENSCANG00000033240	-	85	81.089	ENSRROG00000034102	-	98	74.065	Rhinopithecus_roxellana
ENSCANG00000033240	-	100	83.457	ENSSBOG00000027204	SSB	100	83.457	Saimiri_boliviensis_boliviensis
ENSCANG00000033240	-	100	70.443	ENSSHAG00000018062	SSB	100	70.443	Sarcophilus_harrisii
ENSCANG00000033240	-	99	55.990	ENSSFOG00015000550	ssb	100	56.968	Scleropages_formosus
ENSCANG00000033240	-	98	49.610	ENSSMAG00000013885	ssb	100	50.129	Scophthalmus_maximus
ENSCANG00000033240	-	99	49.136	ENSSDUG00000020117	ssb	100	49.383	Seriola_dumerili
ENSCANG00000033240	-	99	49.100	ENSSLDG00000002525	ssb	100	49.100	Seriola_lalandi_dorsalis
ENSCANG00000033240	-	94	71.018	ENSSARG00000007747	SSB	100	71.018	Sorex_araneus
ENSCANG00000033240	-	100	65.111	ENSSPUG00000012112	SSB	100	65.111	Sphenodon_punctatus
ENSCANG00000033240	-	98	48.628	ENSSPAG00000005696	ssb	100	48.889	Stegastes_partitus
ENSCANG00000033240	-	99	65.337	ENSSSCG00000015938	SSB	98	66.165	Sus_scrofa
ENSCANG00000033240	-	99	63.457	ENSTGUG00000007942	SSB	99	65.185	Taeniopygia_guttata
ENSCANG00000033240	-	99	49.132	ENSTRUG00000017839	ssb	100	49.505	Takifugu_rubripes
ENSCANG00000033240	-	89	52.432	ENSTNIG00000000915	ssb	99	52.432	Tetraodon_nigroviridis
ENSCANG00000033240	-	83	84.348	ENSTBEG00000009056	SSB	80	84.348	Tupaia_belangeri
ENSCANG00000033240	-	100	79.310	ENSTTRG00000002152	SSB	100	79.310	Tursiops_truncatus
ENSCANG00000033240	-	93	81.432	ENSUAMG00000027833	SSB	99	81.432	Ursus_americanus
ENSCANG00000033240	-	100	80.542	ENSUMAG00000013907	SSB	100	80.542	Ursus_maritimus
ENSCANG00000033240	-	100	79.506	ENSVPAG00000007183	SSB	100	79.506	Vicugna_pacos
ENSCANG00000033240	-	100	80.049	ENSVVUG00000016573	SSB	78	80.049	Vulpes_vulpes
ENSCANG00000033240	-	99	51.456	ENSXETG00000025402	ssb	97	52.785	Xenopus_tropicalis
ENSCANG00000033240	-	93	47.520	ENSXCOG00000019109	ssb	98	48.378	Xiphophorus_couchianus
ENSCANG00000033240	-	99	48.030	ENSXMAG00000004888	ssb	100	48.276	Xiphophorus_maculatus