EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000033269 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: DNA dC->dU-editing enzyme APOBEC-3F pseudogene
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Minus strand
Length: 1121 bases
Position: chrKN985639.1:218376-219496
Accession: 105500770
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000019648	APOBEC_N	PF08210.11	7.1e-89	1	2
ENSCANP00000019648	APOBEC_N	PF08210.11	7.1e-89	2	2
ENSCANP00000019651	APOBEC_N	PF08210.11	1.7e-54	1	1
ENSCANP00000019648	APOBEC_C	PF05240.14	1.5e-54	1	2
ENSCANP00000019648	APOBEC_C	PF05240.14	1.5e-54	2	2
ENSCANP00000019651	APOBEC_C	PF05240.14	7.5e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000042613	-	1092	-	ENSCANP00000019648	363 (aa)	-	A0A2K5ISI0
ENSCANT00000042616	-	543	-	ENSCANP00000019651	180 (aa)	-	A0A2K5IT20

Gene Model

Click here to download ENSCANG00000033269's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000033269's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000033269	-	97	38.503	ENSCANG00000030513	-	98	37.705
ENSCANG00000033269	-	68	34.259	ENSCANG00000038359	APOBEC1	65	34.259
ENSCANG00000033269	-	99	91.848	ENSCANG00000032904	-	98	91.848
ENSCANG00000033269	-	98	31.771	ENSCANG00000035072	APOBEC2	92	31.100
ENSCANG00000033269	-	99	70.109	ENSCANG00000039177	APOBEC3C	100	68.817
ENSCANG00000033269	-	99	80.435	ENSCANG00000031957	-	99	80.435
ENSCANG00000033269	-	98	42.264	ENSCANG00000029968	-	77	42.264
ENSCANG00000033269	-	96	40.223	ENSCANG00000035131	AICDA	88	40.588

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000033269	-	99	78.261	ENSG00000243811	APOBEC3D	100	76.344	Homo_sapiens
ENSCANG00000033269	-	99	86.413	ENSG00000128394	APOBEC3F	98	86.413	Homo_sapiens
ENSCANG00000033269	-	99	73.370	ENSG00000244509	APOBEC3C	100	71.505	Homo_sapiens
ENSCANG00000033269	-	99	67.956	ENSANAG00000030088	-	98	65.054	Aotus_nancymaae
ENSCANG00000033269	-	73	66.667	ENSCJAG00000015317	-	100	66.667	Callithrix_jacchus
ENSCANG00000033269	-	98	45.109	ENSCAFG00020002615	-	98	44.022	Canis_lupus_dingo
ENSCANG00000033269	-	98	50.276	ENSTSYG00000030036	-	98	50.276	Carlito_syrichta
ENSCANG00000033269	-	98	54.444	ENSTSYG00000034260	-	97	54.444	Carlito_syrichta
ENSCANG00000033269	-	98	53.846	ENSTSYG00000028254	-	98	53.846	Carlito_syrichta
ENSCANG00000033269	-	100	63.978	ENSCCAG00000030932	-	86	63.978	Cebus_capucinus
ENSCANG00000033269	-	99	90.217	ENSCATG00000033502	-	99	89.674	Cercocebus_atys
ENSCANG00000033269	-	100	69.355	ENSCATG00000043226	APOBEC3C	100	69.355	Cercocebus_atys
ENSCANG00000033269	-	99	69.565	ENSCSAG00000006402	APOBEC3C	100	68.280	Chlorocebus_sabaeus
ENSCANG00000033269	-	99	90.217	ENSCSAG00000006382	APOBEC3F	98	90.217	Chlorocebus_sabaeus
ENSCANG00000033269	-	96	42.336	ENSDNOG00000044642	-	98	31.507	Dasypus_novemcinctus
ENSCANG00000033269	-	99	46.154	ENSEASG00005018641	-	96	46.154	Equus_asinus_asinus
ENSCANG00000033269	-	99	50.000	ENSECAG00000006071	-	98	50.000	Equus_caballus
ENSCANG00000033269	-	99	73.370	ENSGGOG00000036587	-	100	71.505	Gorilla_gorilla
ENSCANG00000033269	-	100	84.987	ENSGGOG00000038678	APOBEC3F	100	84.987	Gorilla_gorilla
ENSCANG00000033269	-	100	43.333	ENSHGLG00000017315	-	91	40.217	Heterocephalus_glaber_female
ENSCANG00000033269	-	98	43.333	ENSHGLG00100003105	-	92	43.333	Heterocephalus_glaber_male
ENSCANG00000033269	-	99	76.630	ENSMFAG00000002331	-	98	76.630	Macaca_fascicularis
ENSCANG00000033269	-	99	88.587	ENSMFAG00000004037	APOBEC3F	100	87.399	Macaca_fascicularis
ENSCANG00000033269	-	99	70.109	ENSMFAG00000016792	APOBEC3C	100	68.280	Macaca_fascicularis
ENSCANG00000033269	-	99	71.739	ENSMMUG00000004018	APOBEC3C	95	71.739	Macaca_mulatta
ENSCANG00000033269	-	100	89.130	ENSMMUG00000004017	APOBEC3F	99	89.130	Macaca_mulatta
ENSCANG00000033269	-	99	70.109	ENSMNEG00000045196	APOBEC3C	100	67.742	Macaca_nemestrina
ENSCANG00000033269	-	99	90.370	ENSMNEG00000043316	APOBEC3D	95	90.370	Macaca_nemestrina
ENSCANG00000033269	-	99	91.304	ENSMLEG00000029642	APOBEC3F	100	89.812	Mandrillus_leucophaeus
ENSCANG00000033269	-	100	69.355	ENSMLEG00000036992	APOBEC3C	100	69.355	Mandrillus_leucophaeus
ENSCANG00000033269	-	98	52.542	ENSMICG00000042615	-	90	48.936	Microcebus_murinus
ENSCANG00000033269	-	99	48.148	ENSMLUG00000023676	-	99	48.148	Myotis_lucifugus
ENSCANG00000033269	-	99	66.304	ENSNLEG00000035811	-	98	66.304	Nomascus_leucogenys
ENSCANG00000033269	-	100	68.280	ENSNLEG00000028392	APOBEC3C	100	68.280	Nomascus_leucogenys
ENSCANG00000033269	-	98	44.444	ENSOGAG00000033404	-	99	44.444	Otolemur_garnettii
ENSCANG00000033269	-	99	43.700	ENSOGAG00000030300	-	99	43.700	Otolemur_garnettii
ENSCANG00000033269	-	98	49.419	ENSOGAG00000032498	-	95	49.419	Otolemur_garnettii
ENSCANG00000033269	-	99	73.370	ENSPPAG00000014118	APOBEC3C	100	71.505	Pan_paniscus
ENSCANG00000033269	-	100	74.731	ENSPPAG00000028218	-	100	74.731	Pan_paniscus
ENSCANG00000033269	-	99	47.541	ENSPPRG00000003726	-	97	47.541	Panthera_pardus
ENSCANG00000033269	-	100	85.523	ENSPTRG00000014385	APOBEC3C	100	85.523	Pan_troglodytes
ENSCANG00000033269	-	100	74.457	ENSPTRG00000041588	APOBEC3D	100	74.457	Pan_troglodytes
ENSCANG00000033269	-	100	88.204	ENSPANG00000010775	APOBEC3F	100	89.130	Papio_anubis
ENSCANG00000033269	-	100	68.280	ENSPPYG00000011832	APOBEC3C	100	68.280	Pongo_abelii
ENSCANG00000033269	-	69	58.730	ENSPCOG00000018072	-	95	59.200	Propithecus_coquereli
ENSCANG00000033269	-	72	58.140	ENSPCOG00000022067	-	98	58.140	Propithecus_coquereli
ENSCANG00000033269	-	78	49.593	ENSPVAG00000009461	-	66	49.593	Pteropus_vampyrus
ENSCANG00000033269	-	100	89.779	ENSRBIG00000030323	-	100	90.761	Rhinopithecus_bieti
ENSCANG00000033269	-	99	92.778	ENSRBIG00000042297	-	100	91.720	Rhinopithecus_bieti
ENSCANG00000033269	-	99	76.630	ENSRBIG00000030834	-	100	75.000	Rhinopithecus_bieti
ENSCANG00000033269	-	100	89.544	ENSRROG00000029045	APOBEC3C	100	89.544	Rhinopithecus_roxellana
ENSCANG00000033269	-	99	77.174	ENSRROG00000028557	-	100	75.543	Rhinopithecus_roxellana
ENSCANG00000033269	-	99	92.222	ENSRROG00000029996	-	98	92.222	Rhinopithecus_roxellana
ENSCANG00000033269	-	98	67.582	ENSSBOG00000032780	-	100	66.340	Saimiri_boliviensis_boliviensis
ENSCANG00000033269	-	98	45.810	ENSUAMG00000004433	-	100	45.810	Ursus_americanus
ENSCANG00000033269	-	99	45.856	ENSUMAG00000014441	-	85	45.856	Ursus_maritimus
ENSCANG00000033269	-	77	47.945	ENSVVUG00000014628	-	97	49.624	Vulpes_vulpes