EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCANG00000033425 (Gene tree)
Gene ID: 105502355
Gene Symbol: MBD1
Alias: CXXC3|PCM1
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 15687 bases
Position: chrKN985766.1:1451034-1466720
Accession: 105502355
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000020053	MBD	PF01429.19	3.7e-16	1	1
ENSCANP00000020075	MBD	PF01429.19	3.8e-16	1	1
ENSCANP00000020077	MBD	PF01429.19	3.8e-16	1	1
ENSCANP00000019992	MBD	PF01429.19	3.9e-16	1	1
ENSCANP00000020086	MBD	PF01429.19	3.9e-16	1	1
ENSCANP00000020081	MBD	PF01429.19	4e-16	1	1
ENSCANP00000020072	MBD	PF01429.19	4.3e-16	1	1
ENSCANP00000020106	MBD	PF01429.19	4.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000042958	MBD1-201	3092	XM_011928789	ENSCANP00000019992	567 (aa)	XP_011784179	A0A2K5IU35
ENSCANT00000043019	MBD1-202	5206	XM_011928781	ENSCANP00000020053	630 (aa)	XP_011784171	A0A2K5ITP4
ENSCANT00000043039	MBD1-203	3492	XM_011928785	ENSCANP00000020072	605 (aa)	XP_011784175	A0A2K5IUB3
ENSCANT00000043044	MBD1-205	3345	XM_011928790	ENSCANP00000020077	556 (aa)	XP_011784180	A0A2K5IUB9
ENSCANT00000043053	MBD1-207	3213	XM_011928787	ENSCANP00000020086	586 (aa)	XP_011784177	A0A2K5IUB4
ENSCANT00000043042	MBD1-204	3485	XM_011928791	ENSCANP00000020075	550 (aa)	XP_011784181	A0A2K5IU04
ENSCANT00000043073	MBD1-208	1929	XM_011928780	ENSCANP00000020106	642 (aa)	XP_011784170	A0A2K5IUD1
ENSCANT00000043048	MBD1-206	3324	XM_011928792	ENSCANP00000020081	549 (aa)	XP_011784182	A0A2K5IUA4

Gene Model

Click here to download ENSCANG00000033425's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000033425's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000033425	MBD1	100	99.524	ENSG00000141644	MBD1	100	99.524	Homo_sapiens
ENSCANG00000033425	MBD1	100	87.816	ENSAMEG00000000238	MBD1	96	87.184	Ailuropoda_melanoleuca
ENSCANG00000033425	MBD1	69	45.455	ENSACAG00000006091	-	100	45.521	Anolis_carolinensis
ENSCANG00000033425	MBD1	100	96.349	ENSANAG00000036253	MBD1	100	96.349	Aotus_nancymaae
ENSCANG00000033425	MBD1	100	86.529	ENSBTAG00000003801	MBD1	100	86.688	Bos_taurus
ENSCANG00000033425	MBD1	100	96.246	ENSCJAG00000004959	MBD1	100	96.246	Callithrix_jacchus
ENSCANG00000033425	MBD1	100	87.005	ENSCAFG00000018928	MBD1	96	87.797	Canis_familiaris
ENSCANG00000033425	MBD1	99	86.196	ENSCAFG00020024272	MBD1	97	86.998	Canis_lupus_dingo
ENSCANG00000033425	MBD1	100	86.529	ENSCHIG00000021134	MBD1	100	86.688	Capra_hircus
ENSCANG00000033425	MBD1	100	90.952	ENSTSYG00000000509	MBD1	100	90.952	Carlito_syrichta
ENSCANG00000033425	MBD1	99	72.089	ENSCAPG00000015782	MBD1	96	71.193	Cavia_aperea
ENSCANG00000033425	MBD1	100	73.790	ENSCPOG00000001671	MBD1	100	73.623	Cavia_porcellus
ENSCANG00000033425	MBD1	100	94.327	ENSCCAG00000034600	MBD1	99	93.236	Cebus_capucinus
ENSCANG00000033425	MBD1	100	99.365	ENSCATG00000029959	MBD1	100	99.365	Cercocebus_atys
ENSCANG00000033425	MBD1	100	85.238	ENSCLAG00000007457	MBD1	89	85.238	Chinchilla_lanigera
ENSCANG00000033425	MBD1	100	99.669	ENSCSAG00000018070	MBD1	100	99.669	Chlorocebus_sabaeus
ENSCANG00000033425	MBD1	100	75.041	ENSCGRG00001014843	Mbd1	100	75.041	Cricetulus_griseus_chok1gshd
ENSCANG00000033425	MBD1	99	66.236	ENSCGRG00000014135	Mbd1	84	78.879	Cricetulus_griseus_crigri
ENSCANG00000033425	MBD1	100	82.092	ENSDNOG00000015998	MBD1	100	83.360	Dasypus_novemcinctus
ENSCANG00000033425	MBD1	99	77.675	ENSDORG00000013917	Mbd1	97	78.659	Dipodomys_ordii
ENSCANG00000033425	MBD1	100	86.709	ENSEASG00005003857	MBD1	100	88.291	Equus_asinus_asinus
ENSCANG00000033425	MBD1	100	86.656	ENSECAG00000011497	MBD1	80	88.303	Equus_caballus
ENSCANG00000033425	MBD1	100	88.449	ENSFCAG00000015730	MBD1	100	87.975	Felis_catus
ENSCANG00000033425	MBD1	99	79.818	ENSFDAG00000011085	MBD1	96	80.180	Fukomys_damarensis
ENSCANG00000033425	MBD1	54	52.308	ENSGAFG00000008975	mbd1b	50	34.857	Gambusia_affinis
ENSCANG00000033425	MBD1	70	31.313	ENSGACG00000012106	-	50	60.656	Gasterosteus_aculeatus
ENSCANG00000033425	MBD1	100	99.206	ENSGGOG00000016966	MBD1	100	99.206	Gorilla_gorilla
ENSCANG00000033425	MBD1	100	85.620	ENSHGLG00000008740	MBD1	100	85.620	Heterocephalus_glaber_female
ENSCANG00000033425	MBD1	93	86.943	ENSHGLG00100005198	MBD1	100	87.948	Heterocephalus_glaber_male
ENSCANG00000033425	MBD1	60	50.602	ENSIPUG00000015243	-	50	50.602	Ictalurus_punctatus
ENSCANG00000033425	MBD1	100	83.089	ENSSTOG00000007780	MBD1	100	83.415	Ictidomys_tridecemlineatus
ENSCANG00000033425	MBD1	98	79.074	ENSJJAG00000022859	Mbd1	96	79.074	Jaculus_jaculus
ENSCANG00000033425	MBD1	87	36.673	ENSLACG00000002414	-	51	65.079	Latimeria_chalumnae
ENSCANG00000033425	MBD1	99	75.622	ENSLAFG00000031328	MBD1	97	75.622	Loxodonta_africana
ENSCANG00000033425	MBD1	100	99.206	ENSMFAG00000026335	MBD1	100	99.206	Macaca_fascicularis
ENSCANG00000033425	MBD1	100	99.206	ENSMMUG00000009050	MBD1	100	99.206	Macaca_mulatta
ENSCANG00000033425	MBD1	100	99.206	ENSMNEG00000038822	MBD1	100	99.206	Macaca_nemestrina
ENSCANG00000033425	MBD1	100	99.524	ENSMLEG00000043121	MBD1	100	99.524	Mandrillus_leucophaeus
ENSCANG00000033425	MBD1	74	36.058	ENSMAMG00000023341	-	51	59.155	Mastacembelus_armatus
ENSCANG00000033425	MBD1	100	89.919	ENSMICG00000006414	MBD1	100	90.244	Microcebus_murinus
ENSCANG00000033425	MBD1	51	73.145	ENSMOCG00000011976	-	100	73.145	Microtus_ochrogaster
ENSCANG00000033425	MBD1	63	45.153	ENSMODG00000001286	-	58	44.186	Monodelphis_domestica
ENSCANG00000033425	MBD1	84	82.895	ENSMUSG00000024561	Mbd1	97	68.153	Mus_musculus
ENSCANG00000033425	MBD1	84	86.842	MGP_PahariEiJ_G0019128	Mbd1	100	68.362	Mus_pahari
ENSCANG00000033425	MBD1	98	69.044	MGP_SPRETEiJ_G0023304	Mbd1	99	69.481	Mus_spretus
ENSCANG00000033425	MBD1	100	87.342	ENSMPUG00000008843	MBD1	96	86.867	Mustela_putorius_furo
ENSCANG00000033425	MBD1	100	85.397	ENSMLUG00000008286	MBD1	96	85.397	Myotis_lucifugus
ENSCANG00000033425	MBD1	98	76.364	ENSNGAG00000011412	Mbd1	96	76.364	Nannospalax_galili
ENSCANG00000033425	MBD1	98	89.179	ENSNLEG00000032711	-	100	83.618	Nomascus_leucogenys
ENSCANG00000033425	MBD1	100	98.843	ENSNLEG00000011661	-	100	98.843	Nomascus_leucogenys
ENSCANG00000033425	MBD1	100	74.545	ENSOPRG00000007647	MBD1	100	74.545	Ochotona_princeps
ENSCANG00000033425	MBD1	99	82.255	ENSODEG00000018451	MBD1	97	82.255	Octodon_degus
ENSCANG00000033425	MBD1	92	46.516	ENSOANG00000014593	-	100	47.727	Ornithorhynchus_anatinus
ENSCANG00000033425	MBD1	100	83.518	ENSOCUG00000006554	MBD1	100	83.994	Oryctolagus_cuniculus
ENSCANG00000033425	MBD1	100	87.344	ENSOGAG00000003784	MBD1	96	87.344	Otolemur_garnettii
ENSCANG00000033425	MBD1	100	86.234	ENSOARG00000004218	MBD1	95	86.392	Ovis_aries
ENSCANG00000033425	MBD1	100	99.339	ENSPPAG00000038886	MBD1	100	99.339	Pan_paniscus
ENSCANG00000033425	MBD1	100	88.633	ENSPPRG00000021387	MBD1	100	88.138	Panthera_pardus
ENSCANG00000033425	MBD1	100	88.633	ENSPTIG00000021231	MBD1	100	88.138	Panthera_tigris_altaica
ENSCANG00000033425	MBD1	100	99.365	ENSPTRG00000010021	MBD1	100	99.365	Pan_troglodytes
ENSCANG00000033425	MBD1	100	99.488	ENSPANG00000010867	MBD1	100	99.488	Papio_anubis
ENSCANG00000033425	MBD1	99	67.201	ENSPEMG00000022630	Mbd1	97	67.143	Peromyscus_maniculatus_bairdii
ENSCANG00000033425	MBD1	92	56.494	ENSPCIG00000027937	-	84	45.234	Phascolarctos_cinereus
ENSCANG00000033425	MBD1	55	53.846	ENSPFOG00000007511	mbd1b	50	32.338	Poecilia_formosa
ENSCANG00000033425	MBD1	54	53.846	ENSPLAG00000021258	mbd1b	50	34.286	Poecilia_latipinna
ENSCANG00000033425	MBD1	57	53.846	ENSPMEG00000024145	mbd1b	50	32.338	Poecilia_mexicana
ENSCANG00000033425	MBD1	54	53.846	ENSPREG00000021805	mbd1b	50	32.338	Poecilia_reticulata
ENSCANG00000033425	MBD1	100	99.339	ENSPPYG00000009158	MBD1	91	99.339	Pongo_abelii
ENSCANG00000033425	MBD1	99	76.198	ENSPCAG00000001648	MBD1	93	85.878	Procavia_capensis
ENSCANG00000033425	MBD1	100	92.574	ENSPCOG00000012450	MBD1	100	92.574	Propithecus_coquereli
ENSCANG00000033425	MBD1	99	57.371	ENSRNOG00000024104	Mbd1	86	70.124	Rattus_norvegicus
ENSCANG00000033425	MBD1	100	99.101	ENSRBIG00000041294	MBD1	100	99.101	Rhinopithecus_bieti
ENSCANG00000033425	MBD1	100	99.206	ENSRROG00000032517	MBD1	100	99.206	Rhinopithecus_roxellana
ENSCANG00000033425	MBD1	100	94.393	ENSSBOG00000027169	MBD1	100	94.150	Saimiri_boliviensis_boliviensis
ENSCANG00000033425	MBD1	57	81.579	ENSSHAG00000003661	-	100	47.335	Sarcophilus_harrisii
ENSCANG00000033425	MBD1	51	51.111	ENSSPAG00000021447	mbd1b	51	34.359	Stegastes_partitus
ENSCANG00000033425	MBD1	100	86.446	ENSSSCG00000004516	MBD1	98	88.528	Sus_scrofa
ENSCANG00000033425	MBD1	51	50.538	ENSTRUG00000013422	mbd1b	50	31.026	Takifugu_rubripes
ENSCANG00000033425	MBD1	74	83.750	ENSTBEG00000012651	-	68	83.750	Tupaia_belangeri
ENSCANG00000033425	MBD1	100	85.008	ENSTTRG00000015523	MBD1	100	84.514	Tursiops_truncatus
ENSCANG00000033425	MBD1	93	91.901	ENSUAMG00000004752	MBD1	100	84.158	Ursus_americanus
ENSCANG00000033425	MBD1	100	87.974	ENSUMAG00000002947	MBD1	100	87.315	Ursus_maritimus