EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCANG00000033564 (Gene tree)
Gene ID: 105522994
Gene Symbol: SF3A1
Alias: PRPF21|Prp21|SAP114|SF3a120
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Minus strand
Length: 25672 bases
Position: chrKN983182.1:748198-773869
Accession: 105522994
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000020279	PRP21_like_P	PF12230.8	2e-51	1	1
ENSCANP00000020279	Surp	PF01805.20	9.3e-46	1	2
ENSCANP00000020279	Surp	PF01805.20	9.3e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000043247	SF3A1-201	5119	XM_011957694	ENSCANP00000020279	793 (aa)	XP_011813084	A0A2K5IU93

Gene Model

Click here to download ENSCANG00000033564's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000033564's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000033564	SF3A1	100	99.748	ENSG00000099995	SF3A1	100	99.748	Homo_sapiens
ENSCANG00000033564	SF3A1	100	83.145	ENSAPOG00000020465	sf3a1	99	84.783	Acanthochromis_polyacanthus
ENSCANG00000033564	SF3A1	100	98.365	ENSAMEG00000007737	SF3A1	100	98.365	Ailuropoda_melanoleuca
ENSCANG00000033564	SF3A1	100	84.528	ENSACIG00000020672	sf3a1	98	85.938	Amphilophus_citrinellus
ENSCANG00000033564	SF3A1	100	82.875	ENSAOCG00000003060	sf3a1	99	84.783	Amphiprion_ocellaris
ENSCANG00000033564	SF3A1	100	83.000	ENSAPEG00000010735	sf3a1	99	84.910	Amphiprion_percula
ENSCANG00000033564	SF3A1	97	85.956	ENSATEG00000021201	sf3a1	97	85.142	Anabas_testudineus
ENSCANG00000033564	SF3A1	95	94.188	ENSAPLG00000009057	SF3A1	99	93.419	Anas_platyrhynchos
ENSCANG00000033564	SF3A1	100	85.591	ENSACAG00000009415	SF3A1	100	86.823	Anolis_carolinensis
ENSCANG00000033564	SF3A1	100	99.369	ENSANAG00000032045	SF3A1	100	99.369	Aotus_nancymaae
ENSCANG00000033564	SF3A1	100	84.383	ENSACLG00000012622	sf3a1	98	86.180	Astatotilapia_calliptera
ENSCANG00000033564	SF3A1	99	83.439	ENSAMXG00000005382	sf3a1	99	84.319	Astyanax_mexicanus
ENSCANG00000033564	SF3A1	100	99.117	ENSBTAG00000003390	SF3A1	100	99.117	Bos_taurus
ENSCANG00000033564	SF3A1	84	43.447	WBGene00004188	prp-21	94	43.502	Caenorhabditis_elegans
ENSCANG00000033564	SF3A1	100	99.496	ENSCJAG00000010370	SF3A1	100	99.496	Callithrix_jacchus
ENSCANG00000033564	SF3A1	100	98.865	ENSCAFG00000012559	SF3A1	100	98.865	Canis_familiaris
ENSCANG00000033564	SF3A1	100	98.865	ENSCAFG00020000838	SF3A1	100	98.865	Canis_lupus_dingo
ENSCANG00000033564	SF3A1	100	98.991	ENSCHIG00000018642	SF3A1	100	98.991	Capra_hircus
ENSCANG00000033564	SF3A1	100	99.117	ENSTSYG00000004739	SF3A1	100	99.117	Carlito_syrichta
ENSCANG00000033564	SF3A1	94	81.041	ENSCAPG00000015414	SF3A1	98	81.041	Cavia_aperea
ENSCANG00000033564	SF3A1	100	98.739	ENSCPOG00000014589	SF3A1	100	98.739	Cavia_porcellus
ENSCANG00000033564	SF3A1	100	99.369	ENSCCAG00000032006	SF3A1	100	99.369	Cebus_capucinus
ENSCANG00000033564	SF3A1	100	99.874	ENSCATG00000029241	SF3A1	100	99.874	Cercocebus_atys
ENSCANG00000033564	SF3A1	100	98.613	ENSCLAG00000006508	SF3A1	100	98.613	Chinchilla_lanigera
ENSCANG00000033564	SF3A1	100	100.000	ENSCSAG00000009470	SF3A1	100	100.000	Chlorocebus_sabaeus
ENSCANG00000033564	SF3A1	61	100.000	ENSCHOG00000005201	SF3A1	69	100.000	Choloepus_hoffmanni
ENSCANG00000033564	SF3A1	100	91.058	ENSCPBG00000007595	SF3A1	100	91.184	Chrysemys_picta_bellii
ENSCANG00000033564	SF3A1	94	52.513	ENSCING00000008526	-	66	58.238	Ciona_intestinalis
ENSCANG00000033564	SF3A1	96	51.742	ENSCSAVG00000005608	-	92	62.712	Ciona_savignyi
ENSCANG00000033564	SF3A1	100	98.487	ENSCGRG00001008933	Sf3a1	100	98.487	Cricetulus_griseus_chok1gshd
ENSCANG00000033564	SF3A1	100	98.487	ENSCGRG00000006127	Sf3a1	100	98.487	Cricetulus_griseus_crigri
ENSCANG00000033564	SF3A1	100	81.784	ENSCSEG00000010792	sf3a1	99	82.179	Cynoglossus_semilaevis
ENSCANG00000033564	SF3A1	100	83.145	ENSCVAG00000004560	sf3a1	98	84.375	Cyprinodon_variegatus
ENSCANG00000033564	SF3A1	100	82.538	ENSDARG00000041887	sf3a1	97	84.876	Danio_rerio
ENSCANG00000033564	SF3A1	100	98.742	ENSDNOG00000010629	SF3A1	100	98.742	Dasypus_novemcinctus
ENSCANG00000033564	SF3A1	100	98.991	ENSDORG00000005613	Sf3a1	100	98.991	Dipodomys_ordii
ENSCANG00000033564	SF3A1	83	60.387	FBgn0266917	Sf3a1	85	59.279	Drosophila_melanogaster
ENSCANG00000033564	SF3A1	89	95.869	ENSETEG00000017194	SF3A1	100	95.869	Echinops_telfairi
ENSCANG00000033564	SF3A1	98	66.102	ENSEBUG00000001285	sf3a1	96	66.914	Eptatretus_burgeri
ENSCANG00000033564	SF3A1	100	99.243	ENSEASG00005010254	SF3A1	100	99.243	Equus_asinus_asinus
ENSCANG00000033564	SF3A1	100	99.243	ENSECAG00000023962	SF3A1	100	99.243	Equus_caballus
ENSCANG00000033564	SF3A1	73	95.082	ENSEEUG00000003159	SF3A1	82	95.082	Erinaceus_europaeus
ENSCANG00000033564	SF3A1	100	82.331	ENSELUG00000022578	sf3a1	98	82.692	Esox_lucius
ENSCANG00000033564	SF3A1	100	98.865	ENSFCAG00000011932	SF3A1	100	98.865	Felis_catus
ENSCANG00000033564	SF3A1	95	93.254	ENSFALG00000006944	SF3A1	100	91.940	Ficedula_albicollis
ENSCANG00000033564	SF3A1	100	98.991	ENSFDAG00000009560	SF3A1	100	98.991	Fukomys_damarensis
ENSCANG00000033564	SF3A1	100	84.277	ENSFHEG00000010866	sf3a1	98	85.547	Fundulus_heteroclitus
ENSCANG00000033564	SF3A1	100	81.234	ENSGMOG00000016024	sf3a1	99	80.485	Gadus_morhua
ENSCANG00000033564	SF3A1	95	94.180	ENSGALG00000007937	SF3A1	100	92.443	Gallus_gallus
ENSCANG00000033564	SF3A1	100	83.270	ENSGAFG00000009111	sf3a1	99	83.525	Gambusia_affinis
ENSCANG00000033564	SF3A1	100	82.620	ENSGACG00000011893	sf3a1	97	83.639	Gasterosteus_aculeatus
ENSCANG00000033564	SF3A1	96	90.933	ENSGAGG00000000762	SF3A1	99	91.064	Gopherus_agassizii
ENSCANG00000033564	SF3A1	100	99.748	ENSGGOG00000012631	SF3A1	100	99.748	Gorilla_gorilla
ENSCANG00000033564	SF3A1	100	84.383	ENSHBUG00000015795	sf3a1	98	86.180	Haplochromis_burtoni
ENSCANG00000033564	SF3A1	100	98.991	ENSHGLG00000007907	SF3A1	100	98.991	Heterocephalus_glaber_female
ENSCANG00000033564	SF3A1	100	98.991	ENSHGLG00100013799	SF3A1	100	98.991	Heterocephalus_glaber_male
ENSCANG00000033564	SF3A1	100	80.252	ENSHCOG00000015423	sf3a1	99	80.774	Hippocampus_comes
ENSCANG00000033564	SF3A1	96	82.682	ENSIPUG00000002470	sf3a1	98	82.943	Ictalurus_punctatus
ENSCANG00000033564	SF3A1	100	99.117	ENSSTOG00000013892	SF3A1	100	99.117	Ictidomys_tridecemlineatus
ENSCANG00000033564	SF3A1	100	98.866	ENSJJAG00000022566	Sf3a1	100	98.866	Jaculus_jaculus
ENSCANG00000033564	SF3A1	100	82.893	ENSKMAG00000002400	sf3a1	98	84.896	Kryptolebias_marmoratus
ENSCANG00000033564	SF3A1	100	82.642	ENSLBEG00000022974	sf3a1	99	83.226	Labrus_bergylta
ENSCANG00000033564	SF3A1	100	87.077	ENSLACG00000003565	SF3A1	97	88.281	Latimeria_chalumnae
ENSCANG00000033564	SF3A1	100	85.088	ENSLOCG00000008251	sf3a1	97	86.883	Lepisosteus_oculatus
ENSCANG00000033564	SF3A1	98	62.293	ENSLAFG00000026032	-	98	61.911	Loxodonta_africana
ENSCANG00000033564	SF3A1	100	99.117	ENSLAFG00000000448	SF3A1	100	99.117	Loxodonta_africana
ENSCANG00000033564	SF3A1	100	99.874	ENSMFAG00000031979	SF3A1	100	99.874	Macaca_fascicularis
ENSCANG00000033564	SF3A1	100	99.874	ENSMMUG00000005547	SF3A1	100	99.874	Macaca_mulatta
ENSCANG00000033564	SF3A1	100	99.748	ENSMNEG00000037229	SF3A1	100	99.748	Macaca_nemestrina
ENSCANG00000033564	SF3A1	100	100.000	ENSMLEG00000041908	SF3A1	100	100.000	Mandrillus_leucophaeus
ENSCANG00000033564	SF3A1	97	85.640	ENSMAMG00000006460	sf3a1	97	85.770	Mastacembelus_armatus
ENSCANG00000033564	SF3A1	100	84.383	ENSMZEG00005009633	sf3a1	98	86.180	Maylandia_zebra
ENSCANG00000033564	SF3A1	95	94.180	ENSMGAG00000001330	SF3A1	99	93.411	Meleagris_gallopavo
ENSCANG00000033564	SF3A1	92	95.082	ENSMAUG00000020317	Sf3a1	94	95.082	Mesocricetus_auratus
ENSCANG00000033564	SF3A1	100	99.369	ENSMICG00000010038	SF3A1	100	99.369	Microcebus_murinus
ENSCANG00000033564	SF3A1	100	98.613	ENSMOCG00000008438	Sf3a1	100	98.613	Microtus_ochrogaster
ENSCANG00000033564	SF3A1	100	81.761	ENSMMOG00000015588	sf3a1	98	82.368	Mola_mola
ENSCANG00000033564	SF3A1	100	97.730	ENSMODG00000009270	SF3A1	100	97.730	Monodelphis_domestica
ENSCANG00000033564	SF3A1	100	84.509	ENSMALG00000000148	sf3a1	99	86.104	Monopterus_albus
ENSCANG00000033564	SF3A1	100	98.361	MGP_CAROLIEiJ_G0016029	Sf3a1	100	98.361	Mus_caroli
ENSCANG00000033564	SF3A1	100	98.361	ENSMUSG00000002129	Sf3a1	100	98.361	Mus_musculus
ENSCANG00000033564	SF3A1	100	98.108	MGP_PahariEiJ_G0016862	Sf3a1	100	98.108	Mus_pahari
ENSCANG00000033564	SF3A1	100	98.361	MGP_SPRETEiJ_G0016870	Sf3a1	100	98.361	Mus_spretus
ENSCANG00000033564	SF3A1	100	98.865	ENSMPUG00000013144	SF3A1	100	98.865	Mustela_putorius_furo
ENSCANG00000033564	SF3A1	100	98.991	ENSMLUG00000002139	SF3A1	100	98.991	Myotis_lucifugus
ENSCANG00000033564	SF3A1	100	98.865	ENSNGAG00000016977	Sf3a1	100	98.865	Nannospalax_galili
ENSCANG00000033564	SF3A1	100	84.635	ENSNBRG00000016642	sf3a1	96	86.825	Neolamprologus_brichardi
ENSCANG00000033564	SF3A1	100	100.000	ENSNLEG00000003686	SF3A1	100	100.000	Nomascus_leucogenys
ENSCANG00000033564	SF3A1	96	87.895	ENSMEUG00000008741	SF3A1	100	87.895	Notamacropus_eugenii
ENSCANG00000033564	SF3A1	100	98.235	ENSOPRG00000016636	SF3A1	100	98.235	Ochotona_princeps
ENSCANG00000033564	SF3A1	100	98.991	ENSODEG00000002571	SF3A1	100	98.991	Octodon_degus
ENSCANG00000033564	SF3A1	100	84.230	ENSONIG00000010848	sf3a1	98	85.547	Oreochromis_niloticus
ENSCANG00000033564	SF3A1	100	98.613	ENSOCUG00000007633	SF3A1	100	98.613	Oryctolagus_cuniculus
ENSCANG00000033564	SF3A1	96	82.021	ENSORLG00000013050	sf3a1	99	83.578	Oryzias_latipes
ENSCANG00000033564	SF3A1	99	80.380	ENSORLG00020003236	sf3a1	94	83.712	Oryzias_latipes_hni
ENSCANG00000033564	SF3A1	100	82.264	ENSORLG00015017411	sf3a1	99	83.871	Oryzias_latipes_hsok
ENSCANG00000033564	SF3A1	100	82.767	ENSOMEG00000013362	sf3a1	99	83.613	Oryzias_melastigma
ENSCANG00000033564	SF3A1	100	99.243	ENSOGAG00000012931	SF3A1	100	99.243	Otolemur_garnettii
ENSCANG00000033564	SF3A1	100	97.226	ENSOARG00000006849	SF3A1	100	97.226	Ovis_aries
ENSCANG00000033564	SF3A1	100	98.739	ENSPPAG00000041790	SF3A1	100	98.739	Pan_paniscus
ENSCANG00000033564	SF3A1	100	98.865	ENSPPRG00000004391	SF3A1	100	98.865	Panthera_pardus
ENSCANG00000033564	SF3A1	97	98.834	ENSPTIG00000000844	SF3A1	100	98.834	Panthera_tigris_altaica
ENSCANG00000033564	SF3A1	100	99.748	ENSPTRG00000014240	SF3A1	100	99.748	Pan_troglodytes
ENSCANG00000033564	SF3A1	100	100.000	ENSPANG00000020772	SF3A1	100	100.000	Papio_anubis
ENSCANG00000033564	SF3A1	83	94.505	ENSPSIG00000012803	SF3A1	96	94.505	Pelodiscus_sinensis
ENSCANG00000033564	SF3A1	96	84.424	ENSPMGG00000023096	sf3a1	100	84.162	Periophthalmus_magnuspinnatus
ENSCANG00000033564	SF3A1	100	98.739	ENSPEMG00000009494	Sf3a1	100	98.739	Peromyscus_maniculatus_bairdii
ENSCANG00000033564	SF3A1	69	78.040	ENSPMAG00000007139	-	90	77.757	Petromyzon_marinus
ENSCANG00000033564	SF3A1	100	97.478	ENSPCIG00000022692	SF3A1	100	97.478	Phascolarctos_cinereus
ENSCANG00000033564	SF3A1	100	75.377	ENSPFOG00000016768	sf3a1	93	79.048	Poecilia_formosa
ENSCANG00000033564	SF3A1	100	83.648	ENSPLAG00000017268	sf3a1	97	85.229	Poecilia_latipinna
ENSCANG00000033564	SF3A1	84	86.145	ENSPMEG00000019811	sf3a1	98	85.392	Poecilia_mexicana
ENSCANG00000033564	SF3A1	100	83.774	ENSPREG00000010347	sf3a1	97	85.621	Poecilia_reticulata
ENSCANG00000033564	SF3A1	100	100.000	ENSPPYG00000011707	SF3A1	100	100.000	Pongo_abelii
ENSCANG00000033564	SF3A1	57	99.528	ENSPCAG00000003266	SF3A1	57	99.528	Procavia_capensis
ENSCANG00000033564	SF3A1	100	99.369	ENSPCOG00000026630	SF3A1	100	99.369	Propithecus_coquereli
ENSCANG00000033564	SF3A1	100	94.704	ENSPVAG00000017719	SF3A1	94	98.121	Pteropus_vampyrus
ENSCANG00000033564	SF3A1	100	84.383	ENSPNYG00000018706	sf3a1	98	86.180	Pundamilia_nyererei
ENSCANG00000033564	SF3A1	98	84.097	ENSPNAG00000003721	sf3a1	98	85.306	Pygocentrus_nattereri
ENSCANG00000033564	SF3A1	100	98.235	ENSRNOG00000005218	Sf3a1	100	98.235	Rattus_norvegicus
ENSCANG00000033564	SF3A1	100	99.874	ENSRBIG00000032167	SF3A1	100	99.874	Rhinopithecus_bieti
ENSCANG00000033564	SF3A1	100	99.874	ENSRROG00000044908	SF3A1	100	99.874	Rhinopithecus_roxellana
ENSCANG00000033564	SF3A1	97	95.220	ENSSBOG00000021960	SF3A1	100	99.409	Saimiri_boliviensis_boliviensis
ENSCANG00000033564	SF3A1	99	93.418	ENSSHAG00000003666	SF3A1	98	95.084	Sarcophilus_harrisii
ENSCANG00000033564	SF3A1	100	83.250	ENSSFOG00015004579	sf3a1	99	85.000	Scleropages_formosus
ENSCANG00000033564	SF3A1	100	81.761	ENSSMAG00000004275	sf3a1	99	82.005	Scophthalmus_maximus
ENSCANG00000033564	SF3A1	100	83.625	ENSSDUG00000022219	sf3a1	99	84.527	Seriola_dumerili
ENSCANG00000033564	SF3A1	100	83.625	ENSSLDG00000012642	sf3a1	99	84.527	Seriola_lalandi_dorsalis
ENSCANG00000033564	SF3A1	97	95.596	ENSSARG00000005960	SF3A1	100	95.596	Sorex_araneus
ENSCANG00000033564	SF3A1	96	92.098	ENSSPUG00000018863	SF3A1	100	91.667	Sphenodon_punctatus
ENSCANG00000033564	SF3A1	100	84.403	ENSSPAG00000011856	sf3a1	99	84.783	Stegastes_partitus
ENSCANG00000033564	SF3A1	100	98.991	ENSSSCG00000010002	SF3A1	100	98.991	Sus_scrofa
ENSCANG00000033564	SF3A1	95	94.195	ENSTGUG00000010547	SF3A1	99	93.645	Taeniopygia_guttata
ENSCANG00000033564	SF3A1	100	81.635	ENSTRUG00000006118	sf3a1	97	82.484	Takifugu_rubripes
ENSCANG00000033564	SF3A1	64	81.413	ENSTNIG00000005713	sf3a1	89	86.607	Tetraodon_nigroviridis
ENSCANG00000033564	SF3A1	100	91.803	ENSTBEG00000012771	SF3A1	100	91.803	Tupaia_belangeri
ENSCANG00000033564	SF3A1	100	98.741	ENSTTRG00000001535	SF3A1	100	98.741	Tursiops_truncatus
ENSCANG00000033564	SF3A1	99	98.094	ENSUAMG00000006750	SF3A1	99	98.094	Ursus_americanus
ENSCANG00000033564	SF3A1	99	98.087	ENSUMAG00000016665	SF3A1	99	98.087	Ursus_maritimus
ENSCANG00000033564	SF3A1	100	98.865	ENSVVUG00000003075	SF3A1	100	98.865	Vulpes_vulpes
ENSCANG00000033564	SF3A1	100	85.822	ENSXETG00000016144	sf3a1	100	85.445	Xenopus_tropicalis
ENSCANG00000033564	SF3A1	100	83.019	ENSXCOG00000015653	sf3a1	99	83.269	Xiphophorus_couchianus
ENSCANG00000033564	SF3A1	100	83.145	ENSXMAG00000002753	sf3a1	99	83.397	Xiphophorus_maculatus