EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000033570 (Gene tree)
Gene ID: 105513755
Gene Symbol: VARS
Alias: VARS2
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Minus strand
Length: 28519 bases
Position: chrKN980895.1:560836-589354
Accession: 105513755
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000020461	tRNA-synt_1g	PF09334.11	9.7e-11	1	1
ENSCANP00000020469	tRNA-synt_1g	PF09334.11	1e-10	1	1
ENSCANP00000020469	Anticodon_1	PF08264.13	1.4e-32	1	1
ENSCANP00000020461	Anticodon_1	PF08264.13	1.5e-32	1	1
ENSCANP00000020461	tRNA-synt_1	PF00133.22	4e-201	1	1
ENSCANP00000020469	tRNA-synt_1	PF00133.22	6.5e-196	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000043431	VARS-201	3985	XM_011944733	ENSCANP00000020461	1264 (aa)	XP_011800123	A0A2K5IVE9
ENSCANT00000043440	VARS-202	3783	-	ENSCANP00000020469	1260 (aa)	-	A0A2K5IUT1

Gene Model

Click here to download ENSCANG00000033570's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000033570's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000033570	VARS	81	50.678	ENSCANG00000014991	VARS2	91	51.714

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000033570	VARS	100	98.734	ENSG00000204394	VARS	100	98.734	Homo_sapiens
ENSCANG00000033570	VARS	98	64.819	ENSAPOG00000020691	vars	99	64.498	Acanthochromis_polyacanthus
ENSCANG00000033570	VARS	98	64.819	ENSAPOG00000020921	vars	99	64.498	Acanthochromis_polyacanthus
ENSCANG00000033570	VARS	100	95.099	ENSAMEG00000006417	VARS	100	95.099	Ailuropoda_melanoleuca
ENSCANG00000033570	VARS	100	65.804	ENSACIG00000013752	vars	100	65.490	Amphilophus_citrinellus
ENSCANG00000033570	VARS	100	64.779	ENSAOCG00000002447	vars	100	64.280	Amphiprion_ocellaris
ENSCANG00000033570	VARS	100	64.779	ENSAPEG00000010638	vars	99	64.953	Amphiprion_percula
ENSCANG00000033570	VARS	100	64.803	ENSATEG00000020219	vars	100	64.409	Anabas_testudineus
ENSCANG00000033570	VARS	90	70.685	ENSACAG00000029133	-	99	71.119	Anolis_carolinensis
ENSCANG00000033570	VARS	100	97.389	ENSANAG00000015453	VARS	100	97.389	Aotus_nancymaae
ENSCANG00000033570	VARS	100	65.116	ENSACLG00000025699	vars	97	64.806	Astatotilapia_calliptera
ENSCANG00000033570	VARS	94	66.138	ENSAMXG00000017716	vars	95	66.138	Astyanax_mexicanus
ENSCANG00000033570	VARS	100	94.778	ENSBTAG00000005631	VARS	100	94.778	Bos_taurus
ENSCANG00000033570	VARS	100	97.389	ENSCJAG00000002604	VARS	100	97.389	Callithrix_jacchus
ENSCANG00000033570	VARS	100	94.462	ENSCAFG00000000636	VARS	100	94.462	Canis_familiaris
ENSCANG00000033570	VARS	94	94.341	ENSCAFG00020020790	VARS	96	94.341	Canis_lupus_dingo
ENSCANG00000033570	VARS	100	95.016	ENSCHIG00000011008	VARS	100	95.016	Capra_hircus
ENSCANG00000033570	VARS	100	96.044	ENSTSYG00000001567	VARS	100	96.044	Carlito_syrichta
ENSCANG00000033570	VARS	91	90.917	ENSCAPG00000013736	VARS	99	90.917	Cavia_aperea
ENSCANG00000033570	VARS	100	92.009	ENSCPOG00000000870	VARS	100	92.009	Cavia_porcellus
ENSCANG00000033570	VARS	100	97.547	ENSCCAG00000035656	VARS	100	97.547	Cebus_capucinus
ENSCANG00000033570	VARS	100	99.051	ENSCATG00000022394	VARS	100	99.051	Cercocebus_atys
ENSCANG00000033570	VARS	88	89.851	ENSCLAG00000009470	VARS	92	89.851	Chinchilla_lanigera
ENSCANG00000033570	VARS	100	99.525	ENSCSAG00000008784	VARS	100	99.525	Chlorocebus_sabaeus
ENSCANG00000033570	VARS	77	74.435	ENSCPBG00000007943	VARS	96	74.538	Chrysemys_picta_bellii
ENSCANG00000033570	VARS	100	93.196	ENSCGRG00001005686	Vars	100	93.196	Cricetulus_griseus_chok1gshd
ENSCANG00000033570	VARS	92	88.107	ENSCGRG00000013352	Vars	78	88.107	Cricetulus_griseus_crigri
ENSCANG00000033570	VARS	100	64.506	ENSCSEG00000019652	vars	100	64.585	Cynoglossus_semilaevis
ENSCANG00000033570	VARS	100	65.268	ENSCVAG00000022398	vars	100	65.116	Cyprinodon_variegatus
ENSCANG00000033570	VARS	100	65.194	ENSDARG00000044575	vars	100	65.346	Danio_rerio
ENSCANG00000033570	VARS	84	93.227	ENSDORG00000016433	Vars	95	93.227	Dipodomys_ordii
ENSCANG00000033570	VARS	69	87.161	ENSETEG00000003824	VARS	76	87.161	Echinops_telfairi
ENSCANG00000033570	VARS	50	71.143	ENSEBUG00000007086	vars	84	70.157	Eptatretus_burgeri
ENSCANG00000033570	VARS	57	62.225	ENSEBUG00000004637	vars	100	62.500	Eptatretus_burgeri
ENSCANG00000033570	VARS	100	95.649	ENSEASG00005015673	VARS	100	95.649	Equus_asinus_asinus
ENSCANG00000033570	VARS	100	94.625	ENSECAG00000014620	VARS	100	95.099	Equus_caballus
ENSCANG00000033570	VARS	83	92.734	ENSEEUG00000004116	VARS	83	92.734	Erinaceus_europaeus
ENSCANG00000033570	VARS	100	64.456	ENSELUG00000006550	vars	97	64.258	Esox_lucius
ENSCANG00000033570	VARS	100	94.699	ENSFCAG00000004510	VARS	100	94.699	Felis_catus
ENSCANG00000033570	VARS	82	92.165	ENSFDAG00000011401	VARS	100	92.165	Fukomys_damarensis
ENSCANG00000033570	VARS	100	65.346	ENSFHEG00000010672	vars	100	65.194	Fundulus_heteroclitus
ENSCANG00000033570	VARS	92	66.223	ENSGMOG00000014908	vars	97	66.306	Gadus_morhua
ENSCANG00000033570	VARS	100	65.603	ENSGAFG00000021630	vars	100	65.579	Gambusia_affinis
ENSCANG00000033570	VARS	92	66.500	ENSGACG00000009601	vars	98	66.333	Gasterosteus_aculeatus
ENSCANG00000033570	VARS	50	65.142	ENSGAGG00000006508	-	91	64.511	Gopherus_agassizii
ENSCANG00000033570	VARS	100	98.813	ENSGGOG00000011364	VARS	100	98.813	Gorilla_gorilla
ENSCANG00000033570	VARS	100	65.039	ENSHBUG00000017151	vars	97	64.729	Haplochromis_burtoni
ENSCANG00000033570	VARS	100	90.902	ENSHGLG00000011646	VARS	100	90.585	Heterocephalus_glaber_female
ENSCANG00000033570	VARS	93	83.306	ENSHGLG00100018062	VARS	100	83.223	Heterocephalus_glaber_male
ENSCANG00000033570	VARS	99	64.574	ENSHCOG00000012198	vars	99	64.747	Hippocampus_comes
ENSCANG00000033570	VARS	100	65.447	ENSIPUG00000005218	vars	100	65.447	Ictalurus_punctatus
ENSCANG00000033570	VARS	100	94.545	ENSSTOG00000013112	VARS	100	94.545	Ictidomys_tridecemlineatus
ENSCANG00000033570	VARS	100	72.152	ENSJJAG00000015343	-	99	73.494	Jaculus_jaculus
ENSCANG00000033570	VARS	100	91.377	ENSJJAG00000019749	-	100	91.377	Jaculus_jaculus
ENSCANG00000033570	VARS	100	65.166	ENSKMAG00000009455	vars	100	65.008	Kryptolebias_marmoratus
ENSCANG00000033570	VARS	100	64.822	ENSLBEG00000010341	vars	100	64.585	Labrus_bergylta
ENSCANG00000033570	VARS	94	62.531	ENSLACG00000015232	VARS	99	62.951	Latimeria_chalumnae
ENSCANG00000033570	VARS	100	67.188	ENSLOCG00000004240	vars	100	67.188	Lepisosteus_oculatus
ENSCANG00000033570	VARS	100	93.671	ENSLAFG00000023090	VARS	100	94.146	Loxodonta_africana
ENSCANG00000033570	VARS	100	99.446	ENSMFAG00000001032	VARS	100	99.446	Macaca_fascicularis
ENSCANG00000033570	VARS	100	99.446	ENSMMUG00000006828	VARS	100	99.446	Macaca_mulatta
ENSCANG00000033570	VARS	100	99.446	ENSMNEG00000042072	VARS	100	99.446	Macaca_nemestrina
ENSCANG00000033570	VARS	100	99.209	ENSMLEG00000039307	VARS	100	99.209	Mandrillus_leucophaeus
ENSCANG00000033570	VARS	100	64.646	ENSMAMG00000003949	vars	100	65.055	Mastacembelus_armatus
ENSCANG00000033570	VARS	100	65.116	ENSMZEG00005018327	vars	100	64.483	Maylandia_zebra
ENSCANG00000033570	VARS	100	92.959	ENSMAUG00000006715	Vars	100	92.959	Mesocricetus_auratus
ENSCANG00000033570	VARS	100	94.858	ENSMICG00000003548	VARS	100	95.522	Microcebus_murinus
ENSCANG00000033570	VARS	100	90.111	ENSMOCG00000015404	Vars	100	90.585	Microtus_ochrogaster
ENSCANG00000033570	VARS	100	64.364	ENSMMOG00000015801	vars	100	64.364	Mola_mola
ENSCANG00000033570	VARS	100	86.867	ENSMODG00000015204	-	100	86.867	Monodelphis_domestica
ENSCANG00000033570	VARS	99	64.775	ENSMALG00000022532	vars	99	64.544	Monopterus_albus
ENSCANG00000033570	VARS	100	93.275	MGP_CAROLIEiJ_G0021491	Vars	100	93.671	Mus_caroli
ENSCANG00000033570	VARS	100	93.354	ENSMUSG00000007029	Vars	100	93.750	Mus_musculus
ENSCANG00000033570	VARS	100	92.722	MGP_PahariEiJ_G0020486	Vars	100	93.117	Mus_pahari
ENSCANG00000033570	VARS	100	93.434	MGP_SPRETEiJ_G0022396	Vars	100	93.829	Mus_spretus
ENSCANG00000033570	VARS	100	94.937	ENSMPUG00000010821	VARS	100	94.937	Mustela_putorius_furo
ENSCANG00000033570	VARS	78	93.522	ENSMLUG00000013126	VARS	100	93.522	Myotis_lucifugus
ENSCANG00000033570	VARS	100	92.247	ENSNGAG00000012151	Vars	100	92.247	Nannospalax_galili
ENSCANG00000033570	VARS	100	64.806	ENSNBRG00000020520	vars	100	64.496	Neolamprologus_brichardi
ENSCANG00000033570	VARS	100	97.943	ENSNLEG00000006351	VARS	100	97.943	Nomascus_leucogenys
ENSCANG00000033570	VARS	100	83.228	ENSMEUG00000011378	VARS	100	83.228	Notamacropus_eugenii
ENSCANG00000033570	VARS	100	93.987	ENSOPRG00000003607	VARS	100	93.987	Ochotona_princeps
ENSCANG00000033570	VARS	100	91.456	ENSODEG00000017681	VARS	100	91.456	Octodon_degus
ENSCANG00000033570	VARS	100	65.520	ENSONIG00000013064	vars	99	67.997	Oreochromis_niloticus
ENSCANG00000033570	VARS	77	78.954	ENSOANG00000005400	VARS	98	78.478	Ornithorhynchus_anatinus
ENSCANG00000033570	VARS	100	92.035	ENSOCUG00000022463	VARS	100	92.035	Oryctolagus_cuniculus
ENSCANG00000033570	VARS	100	64.450	ENSORLG00000013063	vars	100	64.598	Oryzias_latipes
ENSCANG00000033570	VARS	100	65.150	ENSORLG00020003504	vars	100	65.127	Oryzias_latipes_hni
ENSCANG00000033570	VARS	100	65.046	ENSORLG00015009001	vars	100	65.023	Oryzias_latipes_hsok
ENSCANG00000033570	VARS	100	64.815	ENSOMEG00000015016	vars	100	64.792	Oryzias_melastigma
ENSCANG00000033570	VARS	100	95.174	ENSOGAG00000007515	VARS	100	95.174	Otolemur_garnettii
ENSCANG00000033570	VARS	100	98.972	ENSPPAG00000034012	VARS	100	98.972	Pan_paniscus
ENSCANG00000033570	VARS	100	94.858	ENSPPRG00000014855	VARS	100	94.858	Panthera_pardus
ENSCANG00000033570	VARS	85	94.796	ENSPTIG00000010462	VARS	95	94.780	Panthera_tigris_altaica
ENSCANG00000033570	VARS	100	98.892	ENSPTRG00000017985	VARS	100	98.892	Pan_troglodytes
ENSCANG00000033570	VARS	100	97.634	ENSPANG00000014565	VARS	100	97.634	Papio_anubis
ENSCANG00000033570	VARS	100	64.093	ENSPKIG00000016304	vars	100	64.247	Paramormyrops_kingsleyae
ENSCANG00000033570	VARS	100	65.563	ENSPMGG00000023909	vars	100	65.642	Periophthalmus_magnuspinnatus
ENSCANG00000033570	VARS	100	93.908	ENSPEMG00000006639	Vars	100	93.908	Peromyscus_maniculatus_bairdii
ENSCANG00000033570	VARS	100	86.392	ENSPCIG00000018553	VARS	100	86.392	Phascolarctos_cinereus
ENSCANG00000033570	VARS	100	65.837	ENSPFOG00000015690	vars	100	65.812	Poecilia_formosa
ENSCANG00000033570	VARS	100	66.090	ENSPLAG00000009590	vars	100	66.090	Poecilia_latipinna
ENSCANG00000033570	VARS	100	65.837	ENSPMEG00000004708	vars	100	65.812	Poecilia_mexicana
ENSCANG00000033570	VARS	100	64.016	ENSPREG00000013264	vars	100	63.608	Poecilia_reticulata
ENSCANG00000033570	VARS	100	97.073	ENSPPYG00000016460	VARS	100	97.073	Pongo_abelii
ENSCANG00000033570	VARS	86	92.460	ENSPCAG00000013565	VARS	86	92.460	Procavia_capensis
ENSCANG00000033570	VARS	100	95.099	ENSPCOG00000010942	VARS	100	95.573	Propithecus_coquereli
ENSCANG00000033570	VARS	100	91.377	ENSPVAG00000012403	VARS	100	91.377	Pteropus_vampyrus
ENSCANG00000033570	VARS	100	65.039	ENSPNYG00000022511	vars	100	64.729	Pundamilia_nyererei
ENSCANG00000033570	VARS	100	64.779	ENSPNAG00000020962	vars	100	64.624	Pygocentrus_nattereri
ENSCANG00000033570	VARS	100	93.513	ENSRNOG00000000867	Vars	100	93.513	Rattus_norvegicus
ENSCANG00000033570	VARS	100	99.446	ENSRBIG00000041669	VARS	100	99.446	Rhinopithecus_bieti
ENSCANG00000033570	VARS	100	99.446	ENSRROG00000045490	VARS	100	99.446	Rhinopithecus_roxellana
ENSCANG00000033570	VARS	100	97.073	ENSSBOG00000035402	VARS	100	97.073	Saimiri_boliviensis_boliviensis
ENSCANG00000033570	VARS	100	81.775	ENSSHAG00000006937	VARS	100	82.011	Sarcophilus_harrisii
ENSCANG00000033570	VARS	100	64.942	ENSSFOG00015014272	vars	100	65.019	Scleropages_formosus
ENSCANG00000033570	VARS	100	63.777	ENSSMAG00000009596	vars	99	63.517	Scophthalmus_maximus
ENSCANG00000033570	VARS	100	64.706	ENSSDUG00000014177	vars	100	64.396	Seriola_dumerili
ENSCANG00000033570	VARS	100	64.628	ENSSLDG00000025316	vars	100	64.319	Seriola_lalandi_dorsalis
ENSCANG00000033570	VARS	100	65.035	ENSSPAG00000017068	vars	100	65.265	Stegastes_partitus
ENSCANG00000033570	VARS	100	93.123	ENSSSCG00000038950	VARS	100	93.597	Sus_scrofa
ENSCANG00000033570	VARS	82	64.430	ENSTRUG00000012307	vars	98	64.374	Takifugu_rubripes
ENSCANG00000033570	VARS	100	65.520	ENSTNIG00000008011	vars	100	65.517	Tetraodon_nigroviridis
ENSCANG00000033570	VARS	54	95.880	ENSTBEG00000004728	-	60	95.880	Tupaia_belangeri
ENSCANG00000033570	VARS	100	86.234	ENSTTRG00000014128	VARS	100	86.234	Tursiops_truncatus
ENSCANG00000033570	VARS	100	91.352	ENSUAMG00000010424	VARS	100	91.352	Ursus_americanus
ENSCANG00000033570	VARS	93	94.603	ENSUMAG00000013486	VARS	98	94.762	Ursus_maritimus
ENSCANG00000033570	VARS	100	94.071	ENSVVUG00000021323	VARS	100	94.150	Vulpes_vulpes
ENSCANG00000033570	VARS	96	63.137	ENSXETG00000024076	vars	98	62.945	Xenopus_tropicalis
ENSCANG00000033570	VARS	100	65.669	ENSXCOG00000019172	vars	100	65.645	Xiphophorus_couchianus
ENSCANG00000033570	VARS	100	65.525	ENSXMAG00000010927	vars	100	65.501	Xiphophorus_maculatus