EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000033735 (Gene tree)
Gene ID: 105504808
Gene Symbol: ZNF550
Alias: MGC41917
Full Name: zinc finger protein 550
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 29993 bases
Position: chrKN985945.1:134525-164517
Accession: 105504808
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000020597	zf-C2H2	PF00096.26	2.9e-39	1	7
ENSCANP00000020597	zf-C2H2	PF00096.26	2.9e-39	2	7
ENSCANP00000020597	zf-C2H2	PF00096.26	2.9e-39	3	7
ENSCANP00000020597	zf-C2H2	PF00096.26	2.9e-39	4	7
ENSCANP00000020597	zf-C2H2	PF00096.26	2.9e-39	5	7
ENSCANP00000020597	zf-C2H2	PF00096.26	2.9e-39	6	7
ENSCANP00000020597	zf-C2H2	PF00096.26	2.9e-39	7	7
ENSCANP00000020589	zf-C2H2	PF00096.26	7.3e-39	1	7
ENSCANP00000020589	zf-C2H2	PF00096.26	7.3e-39	2	7
ENSCANP00000020589	zf-C2H2	PF00096.26	7.3e-39	3	7
ENSCANP00000020589	zf-C2H2	PF00096.26	7.3e-39	4	7
ENSCANP00000020589	zf-C2H2	PF00096.26	7.3e-39	5	7
ENSCANP00000020589	zf-C2H2	PF00096.26	7.3e-39	6	7
ENSCANP00000020589	zf-C2H2	PF00096.26	7.3e-39	7	7
ENSCANP00000020597	zf-met	PF12874.7	1.1e-05	1	1
ENSCANP00000020589	zf-met	PF12874.7	2.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000043567	ZNF550-202	378	-	ENSCANP00000020595	126 (aa)	-	A0A2K5IVI6
ENSCANT00000043569	ZNF550-203	1131	-	ENSCANP00000020597	376 (aa)	-	A0A2K5IVS9
ENSCANT00000043561	ZNF550-201	1441	XM_011932381	ENSCANP00000020589	417 (aa)	XP_011787771	A0A2K5IV42

Gene Model

Click here to download ENSCANG00000033735's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000033735's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000033735	ZNF550	99	57.269	ENSCANG00000011432	ZNF112	99	57.269
ENSCANG00000033735	ZNF550	99	60.000	ENSCANG00000041558	ZNF701	99	58.537
ENSCANG00000033735	ZNF550	99	57.062	ENSCANG00000017154	ZNF888	99	57.062
ENSCANG00000033735	ZNF550	98	56.548	ENSCANG00000036216	ZNF2	96	56.548
ENSCANG00000033735	ZNF550	99	54.783	ENSCANG00000042957	-	97	54.783
ENSCANG00000033735	ZNF550	99	56.195	ENSCANG00000034143	-	99	56.195
ENSCANG00000033735	ZNF550	99	42.365	ENSCANG00000038483	ZFP1	99	40.888
ENSCANG00000033735	ZNF550	85	36.782	ENSCANG00000011411	ZNF319	87	38.767
ENSCANG00000033735	ZNF550	64	44.162	ENSCANG00000036807	PRDM5	87	40.435
ENSCANG00000033735	ZNF550	60	51.982	ENSCANG00000040047	ZNF768	53	54.286
ENSCANG00000033735	ZNF550	99	61.233	ENSCANG00000037320	ZNF582	91	61.233
ENSCANG00000033735	ZNF550	99	54.425	ENSCANG00000019002	ZNF808	97	54.425
ENSCANG00000033735	ZNF550	99	55.172	ENSCANG00000031963	ZNF28	99	55.172
ENSCANG00000033735	ZNF550	99	54.425	ENSCANG00000031077	-	99	55.947
ENSCANG00000033735	ZNF550	98	55.310	ENSCANG00000032081	ZNF233	98	55.310
ENSCANG00000033735	ZNF550	74	55.752	ENSCANG00000038794	ZNF845	88	55.752
ENSCANG00000033735	ZNF550	97	49.780	ENSCANG00000023944	ZNF225	88	50.000
ENSCANG00000033735	ZNF550	99	52.423	ENSCANG00000036509	ZNF155	97	52.423
ENSCANG00000033735	ZNF550	99	57.225	ENSCANG00000032977	ZNF836	98	57.225
ENSCANG00000033735	ZNF550	99	55.066	ENSCANG00000029539	ZNF235	99	55.066
ENSCANG00000033735	ZNF550	99	61.000	ENSCANG00000012110	ZNF829	92	61.000
ENSCANG00000033735	ZNF550	97	55.947	ENSCANG00000027624	ZNF226	98	55.947
ENSCANG00000033735	ZNF550	100	38.725	ENSCANG00000041423	ZNF205	74	38.915
ENSCANG00000033735	ZNF550	99	52.444	ENSCANG00000042536	ZNF426	99	54.299
ENSCANG00000033735	ZNF550	67	61.233	ENSCANG00000030007	ZNF850	87	61.233
ENSCANG00000033735	ZNF550	99	50.286	ENSCANG00000035769	ZNF317	90	53.684

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000033735	ZNF550	100	95.276	ENSG00000251369	ZNF550	100	95.276	Homo_sapiens
ENSCANG00000033735	ZNF550	100	97.872	ENSCATG00000020915	ZNF550	100	97.872	Cercocebus_atys
ENSCANG00000033735	ZNF550	100	63.708	ENSCLAG00000000250	ZNF550	95	66.404	Chinchilla_lanigera
ENSCANG00000033735	ZNF550	98	96.569	ENSCSAG00000001629	ZNF550	100	96.569	Chlorocebus_sabaeus
ENSCANG00000033735	ZNF550	89	70.968	ENSDNOG00000033330	-	99	69.748	Dasypus_novemcinctus
ENSCANG00000033735	ZNF550	99	69.029	ENSFCAG00000034766	ZNF550	99	69.029	Felis_catus
ENSCANG00000033735	ZNF550	100	94.751	ENSGGOG00000014068	ZNF550	100	94.751	Gorilla_gorilla
ENSCANG00000033735	ZNF550	100	71.599	ENSHGLG00000018048	ZNF550	100	71.599	Heterocephalus_glaber_female
ENSCANG00000033735	ZNF550	100	97.340	ENSMFAG00000036005	ZNF550	100	97.340	Macaca_fascicularis
ENSCANG00000033735	ZNF550	100	97.074	ENSMMUG00000006122	ZNF550	100	97.074	Macaca_mulatta
ENSCANG00000033735	ZNF550	100	97.340	ENSMNEG00000041366	ZNF550	100	97.340	Macaca_nemestrina
ENSCANG00000033735	ZNF550	100	97.606	ENSMLEG00000034688	ZNF550	100	97.606	Mandrillus_leucophaeus
ENSCANG00000033735	ZNF550	100	82.984	ENSMICG00000007561	ZNF550	100	82.984	Microcebus_murinus
ENSCANG00000033735	ZNF550	99	68.766	ENSPPRG00000013475	ZNF550	99	68.766	Panthera_pardus
ENSCANG00000033735	ZNF550	100	67.881	ENSPTIG00000018007	ZNF550	80	67.665	Panthera_tigris_altaica
ENSCANG00000033735	ZNF550	100	94.751	ENSPTRG00000011560	ZNF550	100	94.751	Pan_troglodytes
ENSCANG00000033735	ZNF550	100	97.074	ENSPANG00000030602	ZNF550	100	97.074	Papio_anubis
ENSCANG00000033735	ZNF550	100	85.079	ENSPCOG00000018751	ZNF550	100	85.079	Propithecus_coquereli
ENSCANG00000033735	ZNF550	99	70.673	ENSPVAG00000000908	ZNF550	100	70.913	Pteropus_vampyrus
ENSCANG00000033735	ZNF550	100	98.936	ENSRBIG00000017275	ZNF550	100	98.936	Rhinopithecus_bieti
ENSCANG00000033735	ZNF550	100	98.936	ENSRROG00000040063	ZNF550	100	98.936	Rhinopithecus_roxellana
ENSCANG00000033735	ZNF550	98	78.019	ENSTTRG00000000293	ZNF550	100	78.019	Tursiops_truncatus