EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000034056 (Gene tree)
Gene ID: -
Gene Symbol: ALYREF
Alias: ALY|ALY/REF|BEF|REF|THOC4
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Minus strand
Length: 10458 bases
Position: chrKN979384.1:18198290-18208747
Accession: 19071
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000021435	RRM_1	PF00076.22	9.9e-14	1	1
ENSCANP00000021499	RRM_1	PF00076.22	1.6e-13	1	1
ENSCANP00000021525	RRM_1	PF00076.22	1.8e-13	1	1
ENSCANP00000021530	RRM_1	PF00076.22	1.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000044505	ALYREF-204	492	-	ENSCANP00000021530	163 (aa)	-	A0A2K5IY88
ENSCANT00000044474	ALYREF-202	798	-	ENSCANP00000021499	265 (aa)	-	A0A2K5IXR0
ENSCANT00000044410	ALYREF-201	564	-	ENSCANP00000021435	187 (aa)	-	A0A2K5IXZ6
ENSCANT00000044500	ALYREF-203	774	-	ENSCANP00000021525	257 (aa)	-	A0A2K5IY83

Gene Model

Click here to download ENSCANG00000034056's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000034056's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000034056	ALYREF	61	35.345	ENSCANG00000031292	TRA2A	57	37.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000034056	ALYREF	89	89.266	ENSG00000183684	ALYREF	69	96.133	Homo_sapiens
ENSCANG00000034056	ALYREF	96	68.966	ENSAPOG00000018455	ALYREF	83	67.826	Acanthochromis_polyacanthus
ENSCANG00000034056	ALYREF	92	86.264	ENSAMEG00000017463	ALYREF	75	90.323	Ailuropoda_melanoleuca
ENSCANG00000034056	ALYREF	96	82.353	ENSACAG00000010526	ALYREF	82	78.302	Anolis_carolinensis
ENSCANG00000034056	ALYREF	99	76.963	ENSANAG00000028229	-	66	77.660	Aotus_nancymaae
ENSCANG00000034056	ALYREF	89	98.204	ENSANAG00000022638	-	81	95.833	Aotus_nancymaae
ENSCANG00000034056	ALYREF	89	88.136	ENSBTAG00000008498	ALYREF	70	94.475	Bos_taurus
ENSCANG00000034056	ALYREF	89	88.701	ENSCJAG00000039942	ALYREF	69	96.133	Callithrix_jacchus
ENSCANG00000034056	ALYREF	89	88.136	ENSCAFG00000005877	ALYREF	70	94.475	Canis_familiaris
ENSCANG00000034056	ALYREF	89	88.136	ENSCAFG00020009815	ALYREF	70	94.475	Canis_lupus_dingo
ENSCANG00000034056	ALYREF	90	94.118	ENSCHIG00000017396	ALYREF	76	89.785	Capra_hircus
ENSCANG00000034056	ALYREF	96	88.083	ENSTSYG00000002272	ALYREF	78	92.265	Carlito_syrichta
ENSCANG00000034056	ALYREF	65	83.846	ENSCAPG00000014727	-	100	91.045	Cavia_aperea
ENSCANG00000034056	ALYREF	95	88.764	ENSCPOG00000013710	ALYREF	78	91.573	Cavia_porcellus
ENSCANG00000034056	ALYREF	95	85.792	ENSCCAG00000030237	-	85	85.792	Cebus_capucinus
ENSCANG00000034056	ALYREF	95	86.631	ENSCCAG00000020578	-	69	96.685	Cebus_capucinus
ENSCANG00000034056	ALYREF	92	87.912	ENSCATG00000033169	ALYREF	71	97.585	Cercocebus_atys
ENSCANG00000034056	ALYREF	89	95.808	ENSCLAG00000015026	ALYREF	77	95.808	Chinchilla_lanigera
ENSCANG00000034056	ALYREF	89	89.831	ENSCSAG00000002216	ALYREF	69	96.685	Chlorocebus_sabaeus
ENSCANG00000034056	ALYREF	95	90.000	ENSCGRG00001018191	-	91	79.310	Cricetulus_griseus_chok1gshd
ENSCANG00000034056	ALYREF	89	88.571	ENSCGRG00000015871	-	91	85.638	Cricetulus_griseus_crigri
ENSCANG00000034056	ALYREF	75	60.769	ENSCSEG00000015438	-	84	53.988	Cynoglossus_semilaevis
ENSCANG00000034056	ALYREF	88	86.857	ENSDNOG00000002563	ALYREF	77	93.407	Dasypus_novemcinctus
ENSCANG00000034056	ALYREF	91	90.164	ENSDORG00000025849	-	76	94.086	Dipodomys_ordii
ENSCANG00000034056	ALYREF	88	90.751	ENSETEG00000016596	ALYREF	100	91.573	Echinops_telfairi
ENSCANG00000034056	ALYREF	89	87.571	ENSEASG00005005824	ALYREF	67	93.923	Equus_asinus_asinus
ENSCANG00000034056	ALYREF	89	87.571	ENSECAG00000018754	ALYREF	67	93.923	Equus_caballus
ENSCANG00000034056	ALYREF	58	98.947	ENSEEUG00000010164	ALYREF	56	96.875	Erinaceus_europaeus
ENSCANG00000034056	ALYREF	89	88.136	ENSFCAG00000022549	ALYREF	69	93.923	Felis_catus
ENSCANG00000034056	ALYREF	88	92.169	ENSFDAG00000001213	ALYREF	85	93.642	Fukomys_damarensis
ENSCANG00000034056	ALYREF	95	84.492	ENSGALG00000007237	ALYREF	71	91.713	Gallus_gallus
ENSCANG00000034056	ALYREF	96	74.346	ENSGACG00000013328	ALYREF	83	68.950	Gasterosteus_aculeatus
ENSCANG00000034056	ALYREF	95	82.979	ENSGAGG00000008536	ALYREF	71	91.209	Gopherus_agassizii
ENSCANG00000034056	ALYREF	89	90.341	ENSGGOG00000013935	ALYREF	68	98.305	Gorilla_gorilla
ENSCANG00000034056	ALYREF	95	88.202	ENSHGLG00000008293	ALYREF	79	89.888	Heterocephalus_glaber_female
ENSCANG00000034056	ALYREF	89	86.364	ENSHGLG00100006949	ALYREF	82	89.005	Heterocephalus_glaber_male
ENSCANG00000034056	ALYREF	96	68.844	ENSHCOG00000015046	ALYREF	82	65.471	Hippocampus_comes
ENSCANG00000034056	ALYREF	89	90.805	ENSJJAG00000004134	-	70	90.608	Jaculus_jaculus
ENSCANG00000034056	ALYREF	95	73.958	ENSLACG00000005694	ALYREF	81	70.698	Latimeria_chalumnae
ENSCANG00000034056	ALYREF	95	84.409	ENSLAFG00000003083	ALYREF	99	87.895	Loxodonta_africana
ENSCANG00000034056	ALYREF	89	89.831	ENSMFAG00000001394	ALYREF	70	96.685	Macaca_fascicularis
ENSCANG00000034056	ALYREF	89	90.395	ENSMMUG00000012884	ALYREF	69	96.685	Macaca_mulatta
ENSCANG00000034056	ALYREF	92	87.912	ENSMNEG00000043666	ALYREF	71	97.087	Macaca_nemestrina
ENSCANG00000034056	ALYREF	99	96.757	ENSMLEG00000043353	ALYREF	99	93.981	Mandrillus_leucophaeus
ENSCANG00000034056	ALYREF	89	92.814	ENSMAUG00000020552	-	87	95.294	Mesocricetus_auratus
ENSCANG00000034056	ALYREF	90	89.266	ENSMICG00000017403	ALYREF	66	94.475	Microcebus_murinus
ENSCANG00000034056	ALYREF	91	93.023	ENSMOCG00000016792	-	81	94.798	Microtus_ochrogaster
ENSCANG00000034056	ALYREF	96	84.211	ENSMODG00000003030	ALYREF	67	85.714	Monodelphis_domestica
ENSCANG00000034056	ALYREF	96	71.921	ENSMALG00000019408	ALYREF	74	76.355	Monopterus_albus
ENSCANG00000034056	ALYREF	98	77.895	MGP_CAROLIEiJ_G0014874	Alyref2	82	80.000	Mus_caroli
ENSCANG00000034056	ALYREF	95	84.409	MGP_CAROLIEiJ_G0017529	Alyref	71	91.713	Mus_caroli
ENSCANG00000034056	ALYREF	87	66.332	ENSMUSG00000097427	Gm6763	60	81.818	Mus_musculus
ENSCANG00000034056	ALYREF	87	66.332	ENSMUSG00000091779	Gm21293	80	57.547	Mus_musculus
ENSCANG00000034056	ALYREF	89	66.848	ENSMUSG00000117091	AC153137.1	88	58.796	Mus_musculus
ENSCANG00000034056	ALYREF	95	84.409	ENSMUSG00000025134	Alyref	71	91.713	Mus_musculus
ENSCANG00000034056	ALYREF	87	65.025	ENSMUSG00000090854	Gm4340	80	56.019	Mus_musculus
ENSCANG00000034056	ALYREF	98	81.081	ENSMUSG00000060244	Alyref2	82	83.243	Mus_musculus
ENSCANG00000034056	ALYREF	87	66.332	ENSMUSG00000094144	Gm21312	80	57.547	Mus_musculus
ENSCANG00000034056	ALYREF	87	66.332	ENSMUSG00000097878	Gm8764	60	81.818	Mus_musculus
ENSCANG00000034056	ALYREF	87	66.332	ENSMUSG00000097550	Gm21304	80	57.547	Mus_musculus
ENSCANG00000034056	ALYREF	87	66.332	ENSMUSG00000095022	Gm20765	80	57.547	Mus_musculus
ENSCANG00000034056	ALYREF	89	69.022	ENSMUSG00000086727	4931428L18Rik	74	66.480	Mus_musculus
ENSCANG00000034056	ALYREF	95	84.409	MGP_PahariEiJ_G0018655	-	71	91.713	Mus_pahari
ENSCANG00000034056	ALYREF	74	81.295	MGP_PahariEiJ_G0027255	-	56	84.000	Mus_pahari
ENSCANG00000034056	ALYREF	74	81.295	MGP_PahariEiJ_G0027254	-	57	84.000	Mus_pahari
ENSCANG00000034056	ALYREF	86	77.857	MGP_PahariEiJ_G0018656	-	62	97.436	Mus_pahari
ENSCANG00000034056	ALYREF	95	84.409	MGP_SPRETEiJ_G0018373	Alyref	71	91.713	Mus_spretus
ENSCANG00000034056	ALYREF	86	55.251	MGP_SPRETEiJ_G0016590	-	55	77.419	Mus_spretus
ENSCANG00000034056	ALYREF	98	80.000	MGP_SPRETEiJ_G0015679	Alyref2	82	82.162	Mus_spretus
ENSCANG00000034056	ALYREF	88	63.636	ENSMLUG00000028343	-	84	67.045	Myotis_lucifugus
ENSCANG00000034056	ALYREF	90	87.079	ENSMLUG00000009555	-	68	90.710	Myotis_lucifugus
ENSCANG00000034056	ALYREF	93	69.231	ENSMLUG00000026271	-	71	61.215	Myotis_lucifugus
ENSCANG00000034056	ALYREF	94	56.477	ENSMLUG00000024471	-	77	52.444	Myotis_lucifugus
ENSCANG00000034056	ALYREF	94	67.760	ENSMLUG00000027352	-	61	67.568	Myotis_lucifugus
ENSCANG00000034056	ALYREF	94	60.847	ENSMLUG00000022869	-	76	55.656	Myotis_lucifugus
ENSCANG00000034056	ALYREF	90	65.217	ENSMLUG00000002626	-	79	63.084	Myotis_lucifugus
ENSCANG00000034056	ALYREF	94	68.852	ENSMLUG00000024976	-	72	60.930	Myotis_lucifugus
ENSCANG00000034056	ALYREF	93	66.310	ENSMLUG00000025677	-	67	62.264	Myotis_lucifugus
ENSCANG00000034056	ALYREF	94	56.545	ENSMLUG00000015043	-	92	52.915	Myotis_lucifugus
ENSCANG00000034056	ALYREF	88	69.767	ENSMLUG00000024447	-	69	60.000	Myotis_lucifugus
ENSCANG00000034056	ALYREF	94	74.317	ENSMLUG00000027516	-	61	74.317	Myotis_lucifugus
ENSCANG00000034056	ALYREF	93	65.241	ENSMLUG00000030407	-	61	67.380	Myotis_lucifugus
ENSCANG00000034056	ALYREF	90	89.888	ENSNLEG00000010313	ALYREF	69	96.685	Nomascus_leucogenys
ENSCANG00000034056	ALYREF	65	81.679	ENSMEUG00000002210	ALYREF	59	92.537	Notamacropus_eugenii
ENSCANG00000034056	ALYREF	65	83.846	ENSOPRG00000005551	-	52	88.060	Ochotona_princeps
ENSCANG00000034056	ALYREF	89	85.000	ENSODEG00000008359	ALYREF	71	92.391	Octodon_degus
ENSCANG00000034056	ALYREF	96	70.854	ENSORLG00000012331	ALYREF	79	73.892	Oryzias_latipes
ENSCANG00000034056	ALYREF	89	89.143	ENSOGAG00000012409	ALYREF	76	92.778	Otolemur_garnettii
ENSCANG00000034056	ALYREF	88	91.429	ENSOARG00000017932	ALYREF	67	96.067	Ovis_aries
ENSCANG00000034056	ALYREF	89	88.136	ENSPPRG00000010829	ALYREF	69	93.923	Panthera_pardus
ENSCANG00000034056	ALYREF	77	92.667	ENSPTIG00000006399	ALYREF	81	97.931	Panthera_tigris_altaica
ENSCANG00000034056	ALYREF	90	89.888	ENSPTRG00000009774	ALYREF	69	96.685	Pan_troglodytes
ENSCANG00000034056	ALYREF	92	87.912	ENSPANG00000019265	ALYREF	70	97.906	Papio_anubis
ENSCANG00000034056	ALYREF	66	84.328	ENSPSIG00000017541	ALYREF	99	93.284	Pelodiscus_sinensis
ENSCANG00000034056	ALYREF	89	89.831	ENSPPYG00000008749	ALYREF	69	96.685	Pongo_abelii
ENSCANG00000034056	ALYREF	89	89.205	ENSPCOG00000020874	ALYREF	68	92.265	Propithecus_coquereli
ENSCANG00000034056	ALYREF	88	89.017	ENSPVAG00000017866	ALYREF	69	92.135	Pteropus_vampyrus
ENSCANG00000034056	ALYREF	69	98.214	ENSRNOG00000036687	Alyref	87	75.758	Rattus_norvegicus
ENSCANG00000034056	ALYREF	91	91.160	ENSRBIG00000039651	ALYREF	87	99.535	Rhinopithecus_bieti
ENSCANG00000034056	ALYREF	89	93.750	ENSRROG00000045364	ALYREF	87	99.535	Rhinopithecus_roxellana
ENSCANG00000034056	ALYREF	89	91.477	ENSSHAG00000010459	ALYREF	98	91.146	Sarcophilus_harrisii
ENSCANG00000034056	ALYREF	90	56.853	ENSSDUG00000003992	-	92	49.383	Seriola_dumerili
ENSCANG00000034056	ALYREF	88	58.115	ENSSLDG00000005386	-	92	50.833	Seriola_lalandi_dorsalis
ENSCANG00000034056	ALYREF	95	81.818	ENSSPUG00000004600	ALYREF	93	71.369	Sphenodon_punctatus
ENSCANG00000034056	ALYREF	95	70.443	ENSSPAG00000011178	ALYREF	81	67.100	Stegastes_partitus
ENSCANG00000034056	ALYREF	95	85.027	ENSSSCG00000032655	ALYREF	71	94.475	Sus_scrofa
ENSCANG00000034056	ALYREF	66	86.567	ENSTGUG00000003513	ALYREF	99	93.985	Taeniopygia_guttata
ENSCANG00000034056	ALYREF	94	72.449	ENSTRUG00000008828	ALYREF	84	65.652	Takifugu_rubripes
ENSCANG00000034056	ALYREF	88	86.857	ENSTBEG00000005834	ALYREF	100	94.382	Tupaia_belangeri
ENSCANG00000034056	ALYREF	89	85.876	ENSTTRG00000012275	ALYREF	70	92.265	Tursiops_truncatus
ENSCANG00000034056	ALYREF	89	77.273	ENSUAMG00000016931	ALYREF	66	81.921	Ursus_americanus
ENSCANG00000034056	ALYREF	89	77.273	ENSUMAG00000016384	ALYREF	65	81.921	Ursus_maritimus
ENSCANG00000034056	ALYREF	95	78.756	ENSXETG00000005391	alyref	83	81.122	Xenopus_tropicalis