EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCANG00000034343 (Gene tree)
Gene ID: 105507311
Gene Symbol: TARBP1
Alias: TRM3|TRMT3|TRP-185
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Minus strand
Length: 84515 bases
Position: chrKN979918.1:2421570-2506084
Accession: 105507311
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000021815	SpoU_methylase	PF00588.19	5.8e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000044793	TARBP1-201	4316	XM_011935753	ENSCANP00000021815	1360 (aa)	XP_011791143	A0A2K5IZ30

Gene Model

Click here to download ENSCANG00000034343's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000034343's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000034343	TARBP1	100	97.279	ENSG00000059588	TARBP1	84	97.279	Homo_sapiens
ENSCANG00000034343	TARBP1	99	45.806	ENSAPOG00000016419	si:dkey-85a20.4	83	45.806	Acanthochromis_polyacanthus
ENSCANG00000034343	TARBP1	99	85.231	ENSAMEG00000003359	TARBP1	99	85.231	Ailuropoda_melanoleuca
ENSCANG00000034343	TARBP1	99	45.999	ENSATEG00000020266	si:dkey-85a20.4	83	46.032	Anabas_testudineus
ENSCANG00000034343	TARBP1	99	67.542	ENSAPLG00000007666	TARBP1	100	67.542	Anas_platyrhynchos
ENSCANG00000034343	TARBP1	98	63.596	ENSACAG00000001142	TARBP1	84	63.522	Anolis_carolinensis
ENSCANG00000034343	TARBP1	100	92.721	ENSANAG00000022031	TARBP1	86	92.721	Aotus_nancymaae
ENSCANG00000034343	TARBP1	99	85.599	ENSBTAG00000004517	TARBP1	84	85.599	Bos_taurus
ENSCANG00000034343	TARBP1	100	94.632	ENSCJAG00000018155	TARBP1	84	94.632	Callithrix_jacchus
ENSCANG00000034343	TARBP1	99	86.113	ENSCAFG00000011533	TARBP1	96	86.113	Canis_familiaris
ENSCANG00000034343	TARBP1	99	86.060	ENSCAFG00020027141	TARBP1	84	86.060	Canis_lupus_dingo
ENSCANG00000034343	TARBP1	99	84.672	ENSCHIG00000011437	TARBP1	83	84.672	Capra_hircus
ENSCANG00000034343	TARBP1	96	88.321	ENSTSYG00000010382	TARBP1	97	88.321	Carlito_syrichta
ENSCANG00000034343	TARBP1	94	68.906	ENSCAPG00000010831	TARBP1	99	68.906	Cavia_aperea
ENSCANG00000034343	TARBP1	99	78.719	ENSCPOG00000013995	TARBP1	85	78.792	Cavia_porcellus
ENSCANG00000034343	TARBP1	100	95.294	ENSCCAG00000037278	TARBP1	84	95.294	Cebus_capucinus
ENSCANG00000034343	TARBP1	100	98.529	ENSCATG00000011754	TARBP1	84	98.529	Cercocebus_atys
ENSCANG00000034343	TARBP1	96	78.899	ENSCLAG00000003655	TARBP1	96	78.976	Chinchilla_lanigera
ENSCANG00000034343	TARBP1	95	98.523	ENSCSAG00000010100	TARBP1	100	98.523	Chlorocebus_sabaeus
ENSCANG00000034343	TARBP1	89	77.409	ENSCPBG00000005587	TARBP1	83	77.409	Chrysemys_picta_bellii
ENSCANG00000034343	TARBP1	99	78.197	ENSCGRG00001016690	Tarbp1	85	78.197	Cricetulus_griseus_chok1gshd
ENSCANG00000034343	TARBP1	99	78.197	ENSCGRG00000016893	Tarbp1	92	78.197	Cricetulus_griseus_crigri
ENSCANG00000034343	TARBP1	99	43.035	ENSCSEG00000005255	si:dkey-85a20.4	84	45.444	Cynoglossus_semilaevis
ENSCANG00000034343	TARBP1	99	46.199	ENSDARG00000079055	si:dkey-85a20.4	99	54.844	Danio_rerio
ENSCANG00000034343	TARBP1	99	86.950	ENSDNOG00000008637	TARBP1	82	86.950	Dasypus_novemcinctus
ENSCANG00000034343	TARBP1	95	74.306	ENSDORG00000007984	Tarbp1	100	74.306	Dipodomys_ordii
ENSCANG00000034343	TARBP1	99	88.188	ENSEASG00005000252	TARBP1	85	87.968	Equus_asinus_asinus
ENSCANG00000034343	TARBP1	99	88.041	ENSECAG00000023673	TARBP1	84	88.041	Equus_caballus
ENSCANG00000034343	TARBP1	99	45.217	ENSELUG00000012193	si:dkey-85a20.4	84	45.217	Esox_lucius
ENSCANG00000034343	TARBP1	99	82.954	ENSFCAG00000014183	TARBP1	83	82.954	Felis_catus
ENSCANG00000034343	TARBP1	95	68.227	ENSFALG00000013565	TARBP1	99	68.144	Ficedula_albicollis
ENSCANG00000034343	TARBP1	94	76.012	ENSFDAG00000001308	TARBP1	99	76.089	Fukomys_damarensis
ENSCANG00000034343	TARBP1	91	53.022	ENSFHEG00000007565	si:dkey-85a20.4	81	53.022	Fundulus_heteroclitus
ENSCANG00000034343	TARBP1	99	42.878	ENSGMOG00000004549	si:dkey-85a20.4	99	42.950	Gadus_morhua
ENSCANG00000034343	TARBP1	99	63.470	ENSGALG00000011000	TARBP1	85	63.470	Gallus_gallus
ENSCANG00000034343	TARBP1	99	45.033	ENSGAFG00000007387	si:dkey-85a20.4	83	44.960	Gambusia_affinis
ENSCANG00000034343	TARBP1	99	45.435	ENSGACG00000005865	si:dkey-85a20.4	97	45.435	Gasterosteus_aculeatus
ENSCANG00000034343	TARBP1	99	72.894	ENSGAGG00000012102	TARBP1	87	72.894	Gopherus_agassizii
ENSCANG00000034343	TARBP1	100	93.764	ENSGGOG00000022879	TARBP1	99	93.764	Gorilla_gorilla
ENSCANG00000034343	TARBP1	99	46.918	ENSHBUG00000008877	si:dkey-85a20.4	83	46.918	Haplochromis_burtoni
ENSCANG00000034343	TARBP1	99	79.897	ENSHGLG00000011592	TARBP1	85	79.971	Heterocephalus_glaber_female
ENSCANG00000034343	TARBP1	99	79.485	ENSHGLG00100015169	TARBP1	94	79.485	Heterocephalus_glaber_male
ENSCANG00000034343	TARBP1	98	44.379	ENSIPUG00000005249	si:dkey-85a20.4	81	44.379	Ictalurus_punctatus
ENSCANG00000034343	TARBP1	99	75.798	ENSSTOG00000032291	TARBP1	96	75.798	Ictidomys_tridecemlineatus
ENSCANG00000034343	TARBP1	99	73.711	ENSJJAG00000017840	Tarbp1	94	73.711	Jaculus_jaculus
ENSCANG00000034343	TARBP1	75	48.059	ENSKMAG00000017546	si:dkey-85a20.4	72	48.461	Kryptolebias_marmoratus
ENSCANG00000034343	TARBP1	77	50.265	ENSLBEG00000012132	si:dkey-85a20.4	74	50.398	Labrus_bergylta
ENSCANG00000034343	TARBP1	99	56.076	ENSLACG00000004337	TARBP1	83	56.117	Latimeria_chalumnae
ENSCANG00000034343	TARBP1	99	51.429	ENSLOCG00000016214	si:dkey-85a20.4	83	51.429	Lepisosteus_oculatus
ENSCANG00000034343	TARBP1	99	85.935	ENSLAFG00000011394	TARBP1	86	85.935	Loxodonta_africana
ENSCANG00000034343	TARBP1	100	95.521	ENSMFAG00000041068	TARBP1	85	95.521	Macaca_fascicularis
ENSCANG00000034343	TARBP1	100	95.448	ENSMMUG00000021703	TARBP1	84	95.448	Macaca_mulatta
ENSCANG00000034343	TARBP1	100	98.750	ENSMNEG00000045002	TARBP1	84	98.750	Macaca_nemestrina
ENSCANG00000034343	TARBP1	99	98.672	ENSMLEG00000044182	TARBP1	100	98.672	Mandrillus_leucophaeus
ENSCANG00000034343	TARBP1	99	46.389	ENSMAMG00000021760	si:dkey-85a20.4	84	46.389	Mastacembelus_armatus
ENSCANG00000034343	TARBP1	99	47.016	ENSMZEG00005005751	si:dkey-85a20.4	83	47.016	Maylandia_zebra
ENSCANG00000034343	TARBP1	99	77.458	ENSMAUG00000020968	Tarbp1	85	77.458	Mesocricetus_auratus
ENSCANG00000034343	TARBP1	99	80.515	ENSMICG00000015280	TARBP1	83	80.515	Microcebus_murinus
ENSCANG00000034343	TARBP1	99	76.866	ENSMOCG00000004128	Tarbp1	86	76.866	Microtus_ochrogaster
ENSCANG00000034343	TARBP1	99	44.493	ENSMMOG00000007795	si:dkey-85a20.4	83	44.639	Mola_mola
ENSCANG00000034343	TARBP1	99	76.725	ENSMODG00000008504	TARBP1	82	76.725	Monodelphis_domestica
ENSCANG00000034343	TARBP1	99	45.448	ENSMALG00000002916	si:dkey-85a20.4	83	45.595	Monopterus_albus
ENSCANG00000034343	TARBP1	99	76.310	MGP_CAROLIEiJ_G0031729	Tarbp1	86	76.310	Mus_caroli
ENSCANG00000034343	TARBP1	99	76.015	ENSMUSG00000090290	Tarbp1	86	76.015	Mus_musculus
ENSCANG00000034343	TARBP1	99	76.475	MGP_PahariEiJ_G0023326	Tarbp1	86	76.475	Mus_pahari
ENSCANG00000034343	TARBP1	99	76.233	MGP_SPRETEiJ_G0032846	Tarbp1	86	76.233	Mus_spretus
ENSCANG00000034343	TARBP1	91	83.293	ENSMPUG00000002802	TARBP1	99	83.293	Mustela_putorius_furo
ENSCANG00000034343	TARBP1	99	74.635	ENSMLUG00000002414	TARBP1	99	74.635	Myotis_lucifugus
ENSCANG00000034343	TARBP1	100	97.647	ENSNLEG00000002518	TARBP1	84	97.647	Nomascus_leucogenys
ENSCANG00000034343	TARBP1	63	77.966	ENSMEUG00000011370	-	53	77.966	Notamacropus_eugenii
ENSCANG00000034343	TARBP1	80	86.401	ENSOPRG00000013822	TARBP1	67	86.401	Ochotona_princeps
ENSCANG00000034343	TARBP1	99	78.571	ENSODEG00000005238	TARBP1	88	78.645	Octodon_degus
ENSCANG00000034343	TARBP1	99	47.072	ENSONIG00000009789	si:dkey-85a20.4	97	47.072	Oreochromis_niloticus
ENSCANG00000034343	TARBP1	100	85.966	ENSOCUG00000017418	TARBP1	83	85.966	Oryctolagus_cuniculus
ENSCANG00000034343	TARBP1	99	43.372	ENSORLG00000010529	si:dkey-85a20.4	83	43.319	Oryzias_latipes
ENSCANG00000034343	TARBP1	99	43.146	ENSORLG00020019264	si:dkey-85a20.4	83	43.032	Oryzias_latipes_hni
ENSCANG00000034343	TARBP1	99	43.261	ENSORLG00015003276	si:dkey-85a20.4	83	43.177	Oryzias_latipes_hsok
ENSCANG00000034343	TARBP1	99	84.926	ENSOGAG00000002379	TARBP1	84	84.926	Otolemur_garnettii
ENSCANG00000034343	TARBP1	99	84.203	ENSOARG00000003434	TARBP1	90	84.203	Ovis_aries
ENSCANG00000034343	TARBP1	100	97.426	ENSPPAG00000028097	TARBP1	99	97.426	Pan_paniscus
ENSCANG00000034343	TARBP1	99	82.051	ENSPPRG00000013561	TARBP1	88	81.905	Panthera_pardus
ENSCANG00000034343	TARBP1	99	85.491	ENSPTIG00000009281	TARBP1	99	85.491	Panthera_tigris_altaica
ENSCANG00000034343	TARBP1	100	97.206	ENSPTRG00000002124	TARBP1	84	97.206	Pan_troglodytes
ENSCANG00000034343	TARBP1	100	98.824	ENSPANG00000021933	TARBP1	84	98.824	Papio_anubis
ENSCANG00000034343	TARBP1	99	47.704	ENSPKIG00000016716	si:dkey-85a20.4	83	47.704	Paramormyrops_kingsleyae
ENSCANG00000034343	TARBP1	94	70.930	ENSPSIG00000010699	TARBP1	100	70.930	Pelodiscus_sinensis
ENSCANG00000034343	TARBP1	99	77.843	ENSPEMG00000006888	Tarbp1	90	77.843	Peromyscus_maniculatus_bairdii
ENSCANG00000034343	TARBP1	90	83.495	ENSPCIG00000029710	TARBP1	81	83.495	Phascolarctos_cinereus
ENSCANG00000034343	TARBP1	99	45.051	ENSPFOG00000013020	si:dkey-85a20.4	97	45.080	Poecilia_formosa
ENSCANG00000034343	TARBP1	99	45.297	ENSPLAG00000006044	si:dkey-85a20.4	83	45.224	Poecilia_latipinna
ENSCANG00000034343	TARBP1	99	45.297	ENSPMEG00000017857	si:dkey-85a20.4	83	45.224	Poecilia_mexicana
ENSCANG00000034343	TARBP1	99	45.520	ENSPREG00000022753	si:dkey-85a20.4	83	45.303	Poecilia_reticulata
ENSCANG00000034343	TARBP1	89	98.095	ENSPPYG00000000102	TARBP1	82	98.095	Pongo_abelii
ENSCANG00000034343	TARBP1	83	92.667	ENSPCAG00000004808	TARBP1	70	92.667	Procavia_capensis
ENSCANG00000034343	TARBP1	99	86.985	ENSPCOG00000005666	TARBP1	84	87.059	Propithecus_coquereli
ENSCANG00000034343	TARBP1	99	67.399	ENSPVAG00000014798	TARBP1	85	67.399	Pteropus_vampyrus
ENSCANG00000034343	TARBP1	99	45.779	ENSPNYG00000019135	si:dkey-85a20.4	83	45.779	Pundamilia_nyererei
ENSCANG00000034343	TARBP1	99	71.439	ENSRNOG00000053574	Tarbp1	86	71.439	Rattus_norvegicus
ENSCANG00000034343	TARBP1	100	91.991	ENSRBIG00000043362	TARBP1	92	91.991	Rhinopithecus_bieti
ENSCANG00000034343	TARBP1	100	98.750	ENSRROG00000029527	TARBP1	88	98.750	Rhinopithecus_roxellana
ENSCANG00000034343	TARBP1	99	95.196	ENSSBOG00000034503	TARBP1	97	95.196	Saimiri_boliviensis_boliviensis
ENSCANG00000034343	TARBP1	99	75.387	ENSSHAG00000000013	TARBP1	100	75.387	Sarcophilus_harrisii
ENSCANG00000034343	TARBP1	99	45.882	ENSSFOG00015002660	si:dkey-85a20.4	97	47.041	Scleropages_formosus
ENSCANG00000034343	TARBP1	99	46.215	ENSSMAG00000007081	si:dkey-85a20.4	82	46.287	Scophthalmus_maximus
ENSCANG00000034343	TARBP1	99	44.582	ENSSDUG00000023566	si:dkey-85a20.4	83	45.161	Seriola_dumerili
ENSCANG00000034343	TARBP1	99	46.835	ENSSLDG00000020200	si:dkey-85a20.4	83	46.906	Seriola_lalandi_dorsalis
ENSCANG00000034343	TARBP1	90	84.793	ENSSARG00000012207	TARBP1	76	84.793	Sorex_araneus
ENSCANG00000034343	TARBP1	99	68.603	ENSSPUG00000015364	TARBP1	84	68.603	Sphenodon_punctatus
ENSCANG00000034343	TARBP1	99	46.537	ENSSPAG00000007213	si:dkey-85a20.4	83	46.537	Stegastes_partitus
ENSCANG00000034343	TARBP1	99	86.103	ENSSSCG00000010160	TARBP1	83	90.805	Sus_scrofa
ENSCANG00000034343	TARBP1	96	68.296	ENSTGUG00000010214	TARBP1	100	68.296	Taeniopygia_guttata
ENSCANG00000034343	TARBP1	99	44.945	ENSTNIG00000016586	si:dkey-85a20.4	99	45.018	Tetraodon_nigroviridis
ENSCANG00000034343	TARBP1	94	83.073	ENSTTRG00000008707	TARBP1	83	83.073	Tursiops_truncatus
ENSCANG00000034343	TARBP1	98	84.789	ENSUMAG00000006730	TARBP1	99	84.789	Ursus_maritimus
ENSCANG00000034343	TARBP1	86	90.722	ENSVPAG00000007665	TARBP1	81	90.722	Vicugna_pacos
ENSCANG00000034343	TARBP1	99	86.040	ENSVVUG00000007460	TARBP1	96	85.966	Vulpes_vulpes
ENSCANG00000034343	TARBP1	99	56.099	ENSXETG00000016224	tarbp1	99	56.099	Xenopus_tropicalis
ENSCANG00000034343	TARBP1	90	49.113	ENSXCOG00000011779	si:dkey-85a20.4	90	49.113	Xiphophorus_couchianus
ENSCANG00000034343	TARBP1	77	43.401	ENSXMAG00000009600	si:dkey-85a20.4	100	43.309	Xiphophorus_maculatus