EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCANG00000034435 (Gene tree)
Gene ID
105525378
Gene Symbol
CPSF3
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Colobus_angolensis_palliatus
Status
putative
Strand
Minus strand
Length
64172 bases
Position
chrKN984046.1:4169659-4233830
Accession
105525378
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCANP00000021995CPSF73-100_CPF11718.81.2e-3412
ENSCANP00000021995CPSF73-100_CPF11718.81.2e-3422
ENSCANP00000021995Beta-CaspPF10996.84.7e-3011
ENSCANP00000021995Lactamase_BPF00753.271.6e-1811
ENSCANP00000021995RMMBLPF07521.121.6e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCANT00000044973CPSF3-2011920XM_011960980ENSCANP00000021995639 (aa)XP_011816370A0A2K5IZK5
Gene Model
Click here to download ENSCANG00000034435's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000034435's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCANG00000034435CPSF37132.563ENSCANG00000034418INTS116754.054
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCANG00000034435CPSF310086.550ENSG00000119203CPSF3100100.000Homo_sapiens
ENSCANG00000034435CPSF39975.877ENSAPOG00000022087cpsf39875.877Acanthochromis_polyacanthus
ENSCANG00000034435CPSF37388.577ENSAPOG00000012241CPSF39088.531Acanthochromis_polyacanthus
ENSCANG00000034435CPSF310086.257ENSAMEG00000008493CPSF310086.257Ailuropoda_melanoleuca
ENSCANG00000034435CPSF39173.016ENSACIG00000009846cpsf39973.016Amphilophus_citrinellus
ENSCANG00000034435CPSF39175.873ENSACIG00000023663CPSF39975.873Amphilophus_citrinellus
ENSCANG00000034435CPSF39975.877ENSAOCG00000022056cpsf39875.877Amphiprion_ocellaris
ENSCANG00000034435CPSF39977.664ENSAOCG00000010077CPSF39877.664Amphiprion_ocellaris
ENSCANG00000034435CPSF39976.023ENSAPEG00000019526cpsf39876.023Amphiprion_percula
ENSCANG00000034435CPSF39977.664ENSAPEG00000021167CPSF39877.664Amphiprion_percula
ENSCANG00000034435CPSF39976.170ENSATEG00000003959cpsf39876.170Anabas_testudineus
ENSCANG00000034435CPSF39975.559ENSATEG00000014525CPSF39875.559Anabas_testudineus
ENSCANG00000034435CPSF39883.482ENSAPLG00000006941CPSF39883.482Anas_platyrhynchos
ENSCANG00000034435CPSF39281.260ENSACAG00000001759CPSF39981.260Anolis_carolinensis
ENSCANG00000034435CPSF310079.681ENSANAG00000031254CPSF310079.681Aotus_nancymaae
ENSCANG00000034435CPSF39775.522ENSACLG00000014484cpsf39975.522Astatotilapia_calliptera
ENSCANG00000034435CPSF39175.873ENSACLG00000018846CPSF39975.873Astatotilapia_calliptera
ENSCANG00000034435CPSF39978.363ENSAMXG00000004786cpsf39878.363Astyanax_mexicanus
ENSCANG00000034435CPSF310086.404ENSBTAG00000019735CPSF310086.404Bos_taurus
ENSCANG00000034435CPSF38556.920WBGene00013460cpsf-38156.920Caenorhabditis_elegans
ENSCANG00000034435CPSF310086.257ENSCJAG00000006276CPSF310086.257Callithrix_jacchus
ENSCANG00000034435CPSF310086.257ENSCAFG00000003375CPSF39586.257Canis_familiaris
ENSCANG00000034435CPSF38789.744ENSCAFG00020026799CPSF39589.744Canis_lupus_dingo
ENSCANG00000034435CPSF310086.404ENSCHIG00000013973CPSF310086.404Capra_hircus
ENSCANG00000034435CPSF310086.696ENSTSYG00000002967CPSF310086.696Carlito_syrichta
ENSCANG00000034435CPSF39784.799ENSCAPG00000013851CPSF310084.799Cavia_aperea
ENSCANG00000034435CPSF310085.174ENSCPOG00000011299CPSF310085.174Cavia_porcellus
ENSCANG00000034435CPSF310086.404ENSCCAG00000036730CPSF310086.404Cebus_capucinus
ENSCANG00000034435CPSF310087.370ENSCATG00000014770CPSF39791.873Cercocebus_atys
ENSCANG00000034435CPSF310085.380ENSCLAG00000002727CPSF310085.380Chinchilla_lanigera
ENSCANG00000034435CPSF310078.801ENSCSAG00000007125CPSF310078.801Chlorocebus_sabaeus
ENSCANG00000034435CPSF369100.000ENSCHOG00000000180CPSF36893.939Choloepus_hoffmanni
ENSCANG00000034435CPSF39983.261ENSCPBG00000014074CPSF39983.261Chrysemys_picta_bellii
ENSCANG00000034435CPSF39959.302ENSCING00000007214-9859.302Ciona_intestinalis
ENSCANG00000034435CPSF310085.819ENSCGRG00001013134Cpsf310085.819Cricetulus_griseus_chok1gshd
ENSCANG00000034435CPSF310085.819ENSCGRG00000018319Cpsf310085.819Cricetulus_griseus_crigri
ENSCANG00000034435CPSF39976.822ENSCSEG00000002021CPSF39976.074Cynoglossus_semilaevis
ENSCANG00000034435CPSF39978.394ENSCVAG00000015067CPSF39878.394Cyprinodon_variegatus
ENSCANG00000034435CPSF39979.529ENSDARG00000027649cpsf39879.529Danio_rerio
ENSCANG00000034435CPSF310084.180ENSDNOG00000008940CPSF39584.180Dasypus_novemcinctus
ENSCANG00000034435CPSF39585.253ENSDORG00000014263Cpsf310085.253Dipodomys_ordii
ENSCANG00000034435CPSF39960.352FBgn0261065Cpsf739860.352Drosophila_melanogaster
ENSCANG00000034435CPSF39578.779ENSETEG00000003893CPSF310078.779Echinops_telfairi
ENSCANG00000034435CPSF39970.344ENSEBUG00000009018cpsf39870.487Eptatretus_burgeri
ENSCANG00000034435CPSF310086.257ENSEASG00005003970CPSF310086.257Equus_asinus_asinus
ENSCANG00000034435CPSF310086.257ENSECAG00000019911CPSF310086.257Equus_caballus
ENSCANG00000034435CPSF310070.717ENSEEUG00000015422CPSF310070.717Erinaceus_europaeus
ENSCANG00000034435CPSF39978.363ENSELUG00000013775cpsf39878.363Esox_lucius
ENSCANG00000034435CPSF310086.404ENSFCAG00000007852CPSF310086.404Felis_catus
ENSCANG00000034435CPSF39482.998ENSFALG00000006572CPSF310082.998Ficedula_albicollis
ENSCANG00000034435CPSF39984.402ENSFDAG00000006317CPSF39984.402Fukomys_damarensis
ENSCANG00000034435CPSF39975.439ENSFHEG00000014774cpsf39875.439Fundulus_heteroclitus
ENSCANG00000034435CPSF36162.169ENSFHEG00000012186CPSF39962.169Fundulus_heteroclitus
ENSCANG00000034435CPSF39976.878ENSGMOG00000003157cpsf39876.878Gadus_morhua
ENSCANG00000034435CPSF39983.847ENSGALG00000016424CPSF39983.847Gallus_gallus
ENSCANG00000034435CPSF39978.331ENSGAFG00000008016CPSF39878.331Gambusia_affinis
ENSCANG00000034435CPSF39271.630ENSGAFG00000019449cpsf39971.630Gambusia_affinis
ENSCANG00000034435CPSF36584.368ENSGAGG00000025583CPSF38584.368Gopherus_agassizii
ENSCANG00000034435CPSF310084.549ENSGGOG00000001757CPSF310085.669Gorilla_gorilla
ENSCANG00000034435CPSF39975.656ENSHBUG00000001188cpsf39975.656Haplochromis_burtoni
ENSCANG00000034435CPSF36176.238ENSHBUG00000014332CPSF39976.238Haplochromis_burtoni
ENSCANG00000034435CPSF310084.302ENSHGLG00000000666CPSF39984.302Heterocephalus_glaber_female
ENSCANG00000034435CPSF310084.302ENSHGLG00100007765CPSF39984.302Heterocephalus_glaber_male
ENSCANG00000034435CPSF39974.964ENSHCOG00000007251cpsf39974.964Hippocampus_comes
ENSCANG00000034435CPSF39976.583ENSHCOG00000015957CPSF39776.583Hippocampus_comes
ENSCANG00000034435CPSF39976.788ENSIPUG00000023488cpsf39876.788Ictalurus_punctatus
ENSCANG00000034435CPSF310085.610ENSSTOG00000004476CPSF310085.610Ictidomys_tridecemlineatus
ENSCANG00000034435CPSF310084.942ENSJJAG00000023415Cpsf310084.942Jaculus_jaculus
ENSCANG00000034435CPSF39977.372ENSKMAG00000007317CPSF39877.372Kryptolebias_marmoratus
ENSCANG00000034435CPSF39974.708ENSKMAG00000002806cpsf39874.708Kryptolebias_marmoratus
ENSCANG00000034435CPSF39972.440ENSLBEG00000020569cpsf39472.440Labrus_bergylta
ENSCANG00000034435CPSF35675.204ENSLBEG00000015018-9975.204Labrus_bergylta
ENSCANG00000034435CPSF39478.254ENSLBEG00000013492CPSF39878.254Labrus_bergylta
ENSCANG00000034435CPSF39973.139ENSLACG00000008308CPSF39873.139Latimeria_chalumnae
ENSCANG00000034435CPSF39978.832ENSLOCG00000016823cpsf39878.832Lepisosteus_oculatus
ENSCANG00000034435CPSF39984.706ENSLAFG00000009467CPSF310084.706Loxodonta_africana
ENSCANG00000034435CPSF310086.550ENSMFAG00000001339CPSF310086.550Macaca_fascicularis
ENSCANG00000034435CPSF39485.781ENSMMUG00000018038CPSF310085.781Macaca_mulatta
ENSCANG00000034435CPSF310081.611ENSMNEG00000039447CPSF310081.611Macaca_nemestrina
ENSCANG00000034435CPSF310086.696ENSMLEG00000026825CPSF310086.696Mandrillus_leucophaeus
ENSCANG00000034435CPSF39975.877ENSMAMG00000003076cpsf39875.877Mastacembelus_armatus
ENSCANG00000034435CPSF39175.358ENSMAMG00000008835CPSF39975.358Mastacembelus_armatus
ENSCANG00000034435CPSF39978.792ENSMZEG00005006258CPSF39878.792Maylandia_zebra
ENSCANG00000034435CPSF39975.656ENSMZEG00005014358cpsf39975.656Maylandia_zebra
ENSCANG00000034435CPSF39783.508ENSMGAG00000013995CPSF310083.508Meleagris_gallopavo
ENSCANG00000034435CPSF35685.638ENSMAUG00000000166Cpsf310085.638Mesocricetus_auratus
ENSCANG00000034435CPSF310085.457ENSMICG00000002363CPSF310085.457Microcebus_murinus
ENSCANG00000034435CPSF310083.707ENSMOCG00000020067Cpsf310083.707Microtus_ochrogaster
ENSCANG00000034435CPSF39475.274ENSMMOG00000018212CPSF39875.274Mola_mola
ENSCANG00000034435CPSF37866.558ENSMMOG00000011923CPSF38472.519Mola_mola
ENSCANG00000034435CPSF310083.741ENSMODG00000014703CPSF310083.741Monodelphis_domestica
ENSCANG00000034435CPSF39272.446ENSMALG00000011474CPSF39972.446Monopterus_albus
ENSCANG00000034435CPSF39976.531ENSMALG00000016416cpsf39976.531Monopterus_albus
ENSCANG00000034435CPSF310085.526MGP_CAROLIEiJ_G0017640Cpsf310085.526Mus_caroli
ENSCANG00000034435CPSF310085.526ENSMUSG00000054309Cpsf310085.526Mus_musculus
ENSCANG00000034435CPSF310085.380MGP_PahariEiJ_G0029397Cpsf310085.380Mus_pahari
ENSCANG00000034435CPSF310085.526MGP_SPRETEiJ_G0018481Cpsf310085.526Mus_spretus
ENSCANG00000034435CPSF310085.673ENSMPUG00000013213CPSF310085.673Mustela_putorius_furo
ENSCANG00000034435CPSF310085.756ENSMLUG00000010636CPSF310085.756Myotis_lucifugus
ENSCANG00000034435CPSF310085.673ENSNGAG00000019836Cpsf310085.673Nannospalax_galili
ENSCANG00000034435CPSF39175.873ENSNBRG00000010525CPSF39975.873Neolamprologus_brichardi
ENSCANG00000034435CPSF39975.219ENSNBRG00000004770cpsf39975.219Neolamprologus_brichardi
ENSCANG00000034435CPSF310086.550ENSNLEG00000013359CPSF310086.550Nomascus_leucogenys
ENSCANG00000034435CPSF38863.298ENSMEUG00000013117-8463.298Notamacropus_eugenii
ENSCANG00000034435CPSF38899.024ENSOPRG00000008902CPSF38499.024Ochotona_princeps
ENSCANG00000034435CPSF310084.448ENSODEG00000003129CPSF310084.448Octodon_degus
ENSCANG00000034435CPSF39975.802ENSONIG00000018812cpsf39975.802Oreochromis_niloticus
ENSCANG00000034435CPSF38181.162ENSOANG00000008577CPSF310081.162Ornithorhynchus_anatinus
ENSCANG00000034435CPSF310085.819ENSOCUG00000003728CPSF310085.819Oryctolagus_cuniculus
ENSCANG00000034435CPSF39974.853ENSORLG00000018854cpsf39974.853Oryzias_latipes
ENSCANG00000034435CPSF39974.853ENSORLG00020013331cpsf39974.853Oryzias_latipes_hni
ENSCANG00000034435CPSF39974.853ENSORLG00015011017cpsf39974.853Oryzias_latipes_hsok
ENSCANG00000034435CPSF39975.000ENSOMEG00000010647cpsf39475.000Oryzias_melastigma
ENSCANG00000034435CPSF310076.462ENSOGAG00000001680CPSF310076.462Otolemur_garnettii
ENSCANG00000034435CPSF310086.404ENSOARG00000015073CPSF310086.404Ovis_aries
ENSCANG00000034435CPSF310086.696ENSPPAG00000042457CPSF310086.696Pan_paniscus
ENSCANG00000034435CPSF310086.111ENSPPRG00000016790CPSF310086.111Panthera_pardus
ENSCANG00000034435CPSF39986.029ENSPTIG00000003920CPSF310085.039Panthera_tigris_altaica
ENSCANG00000034435CPSF310086.696ENSPTRG00000011638CPSF310086.696Pan_troglodytes
ENSCANG00000034435CPSF310086.404ENSPANG00000016798CPSF310086.404Papio_anubis
ENSCANG00000034435CPSF39979.386ENSPKIG00000023646cpsf39978.582Paramormyrops_kingsleyae
ENSCANG00000034435CPSF39982.577ENSPSIG00000016144CPSF310082.577Pelodiscus_sinensis
ENSCANG00000034435CPSF39171.870ENSPMGG00000006141-9971.870Periophthalmus_magnuspinnatus
ENSCANG00000034435CPSF36173.153ENSPMGG00000015311CPSF39973.153Periophthalmus_magnuspinnatus
ENSCANG00000034435CPSF310085.234ENSPEMG00000017668Cpsf310085.234Peromyscus_maniculatus_bairdii
ENSCANG00000034435CPSF37982.309ENSPMAG00000004841cpsf39982.309Petromyzon_marinus
ENSCANG00000034435CPSF39784.558ENSPCIG00000009823CPSF39884.558Phascolarctos_cinereus
ENSCANG00000034435CPSF39978.331ENSPFOG00000010418-9878.331Poecilia_formosa
ENSCANG00000034435CPSF39974.927ENSPFOG00000015922cpsf39974.927Poecilia_formosa
ENSCANG00000034435CPSF39975.328ENSPLAG00000000882cpsf39975.328Poecilia_latipinna
ENSCANG00000034435CPSF36175.245ENSPLAG00000021300-9975.245Poecilia_latipinna
ENSCANG00000034435CPSF39975.620ENSPMEG00000018309cpsf39975.620Poecilia_mexicana
ENSCANG00000034435CPSF39976.807ENSPREG00000004482CPSF39876.807Poecilia_reticulata
ENSCANG00000034435CPSF39272.170ENSPREG00000014875cpsf39972.170Poecilia_reticulata
ENSCANG00000034435CPSF310089.908ENSPPYG00000012666CPSF310089.908Pongo_abelii
ENSCANG00000034435CPSF38487.500ENSPCAG00000015042CPSF38787.500Procavia_capensis
ENSCANG00000034435CPSF38099.512ENSPCOG00000023016CPSF38599.512Propithecus_coquereli
ENSCANG00000034435CPSF39986.091ENSPVAG00000005324CPSF39986.091Pteropus_vampyrus
ENSCANG00000034435CPSF39975.656ENSPNYG00000004405cpsf39975.656Pundamilia_nyererei
ENSCANG00000034435CPSF37881.955ENSPNYG00000021047CPSF38981.955Pundamilia_nyererei
ENSCANG00000034435CPSF39978.351ENSPNAG00000023060cpsf39878.351Pygocentrus_nattereri
ENSCANG00000034435CPSF39985.484ENSRNOG00000052418Cpsf39985.484Rattus_norvegicus
ENSCANG00000034435CPSF310080.730ENSRBIG00000041615CPSF310080.730Rhinopithecus_bieti
ENSCANG00000034435CPSF310086.696ENSRROG00000033792CPSF310086.696Rhinopithecus_roxellana
ENSCANG00000034435CPSF37841.864YLR277CYSH17541.864Saccharomyces_cerevisiae
ENSCANG00000034435CPSF310080.435ENSSBOG00000027263CPSF310080.435Saimiri_boliviensis_boliviensis
ENSCANG00000034435CPSF310085.088ENSSHAG00000007024CPSF310085.088Sarcophilus_harrisii
ENSCANG00000034435CPSF39979.562ENSSFOG00015002108cpsf39979.562Scleropages_formosus
ENSCANG00000034435CPSF39479.380ENSSMAG00000020534CPSF39579.380Scophthalmus_maximus
ENSCANG00000034435CPSF39977.810ENSSDUG00000018498CPSF39877.810Seriola_dumerili
ENSCANG00000034435CPSF39976.093ENSSDUG00000002828cpsf39676.093Seriola_dumerili
ENSCANG00000034435CPSF39976.093ENSSLDG00000008469cpsf39676.093Seriola_lalandi_dorsalis
ENSCANG00000034435CPSF39977.810ENSSLDG00000005234CPSF39877.810Seriola_lalandi_dorsalis
ENSCANG00000034435CPSF38993.846ENSSARG00000005186CPSF38893.846Sorex_araneus
ENSCANG00000034435CPSF39780.626ENSSPUG00000015525CPSF39780.626Sphenodon_punctatus
ENSCANG00000034435CPSF39977.518ENSSPAG00000002906CPSF39877.518Stegastes_partitus
ENSCANG00000034435CPSF39976.023ENSSPAG00000018579cpsf39876.023Stegastes_partitus
ENSCANG00000034435CPSF39986.091ENSSSCG00000020799CPSF39986.091Sus_scrofa
ENSCANG00000034435CPSF39983.700ENSTGUG00000013016CPSF39983.700Taeniopygia_guttata
ENSCANG00000034435CPSF36169.231ENSTRUG00000013905CPSF39969.231Takifugu_rubripes
ENSCANG00000034435CPSF39975.439ENSTRUG00000007030cpsf39775.439Takifugu_rubripes
ENSCANG00000034435CPSF38482.645ENSTBEG00000002707CPSF38582.645Tupaia_belangeri
ENSCANG00000034435CPSF38776.329ENSTTRG00000000861CPSF38876.329Tursiops_truncatus
ENSCANG00000034435CPSF39685.693ENSUAMG00000007535CPSF39485.693Ursus_americanus
ENSCANG00000034435CPSF39485.471ENSUMAG00000003676CPSF310085.471Ursus_maritimus
ENSCANG00000034435CPSF39284.639ENSVPAG00000008041CPSF310084.639Vicugna_pacos
ENSCANG00000034435CPSF310086.257ENSVVUG00000002194CPSF310086.257Vulpes_vulpes
ENSCANG00000034435CPSF39979.649ENSXETG00000008263cpsf39979.649Xenopus_tropicalis
ENSCANG00000034435CPSF35673.067ENSXCOG00000000957-8773.067Xiphophorus_couchianus
ENSCANG00000034435CPSF39975.292ENSXCOG00000019695cpsf39975.292Xiphophorus_couchianus
ENSCANG00000034435CPSF39978.184ENSXMAG00000027291CPSF39878.184Xiphophorus_maculatus
ENSCANG00000034435CPSF39974.964ENSXMAG00000009784cpsf39974.964Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us