EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCANG00000034659 (Gene tree)
Gene ID: 105506892
Gene Symbol: TRMT13
Alias: CCDC76|FLJ10287|FLJ11219
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 17640 bases
Position: chrKN979841.1:495426-513065
Accession: 105506892
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000022479	TRM13	PF05206.14	2.8e-92	1	1
ENSCANP00000022487	zf-U11-48K	PF05253.12	7.2e-10	1	1
ENSCANP00000022479	zf-U11-48K	PF05253.12	3.7e-09	1	1
ENSCANP00000022487	zf-TRM13_CCCH	PF11722.8	4.7e-14	1	1
ENSCANP00000022479	zf-TRM13_CCCH	PF11722.8	7.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000045469	TRMT13-202	330	-	ENSCANP00000022487	109 (aa)	-	A0A2K5J147
ENSCANT00000045461	TRMT13-201	3142	XM_011935175	ENSCANP00000022479	481 (aa)	XP_011790565	A0A2K5J0N4

Gene Model

Click here to download ENSCANG00000034659's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000034659's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000034659	TRMT13	100	98.545	ENSG00000122435	TRMT13	100	98.545	Homo_sapiens
ENSCANG00000034659	TRMT13	86	60.638	ENSAPOG00000015131	trmt13	99	47.896	Acanthochromis_polyacanthus
ENSCANG00000034659	TRMT13	100	92.661	ENSAMEG00000008917	TRMT13	100	90.852	Ailuropoda_melanoleuca
ENSCANG00000034659	TRMT13	99	56.481	ENSACIG00000005804	trmt13	97	51.037	Amphilophus_citrinellus
ENSCANG00000034659	TRMT13	87	60.000	ENSAOCG00000023585	trmt13	99	48.805	Amphiprion_ocellaris
ENSCANG00000034659	TRMT13	87	60.000	ENSAPEG00000004025	trmt13	99	48.413	Amphiprion_percula
ENSCANG00000034659	TRMT13	87	65.263	ENSATEG00000006597	trmt13	97	51.464	Anabas_testudineus
ENSCANG00000034659	TRMT13	88	68.075	ENSAPLG00000014924	TRMT13	99	68.075	Anas_platyrhynchos
ENSCANG00000034659	TRMT13	96	64.224	ENSACAG00000003498	TRMT13	98	64.224	Anolis_carolinensis
ENSCANG00000034659	TRMT13	100	99.083	ENSANAG00000019525	TRMT13	100	99.083	Aotus_nancymaae
ENSCANG00000034659	TRMT13	96	53.390	ENSACLG00000020018	trmt13	99	53.390	Astatotilapia_calliptera
ENSCANG00000034659	TRMT13	95	55.032	ENSAMXG00000017963	trmt13	97	55.460	Astyanax_mexicanus
ENSCANG00000034659	TRMT13	100	90.644	ENSBTAG00000015781	TRMT13	100	90.644	Bos_taurus
ENSCANG00000034659	TRMT13	100	99.083	ENSCJAG00000000200	TRMT13	99	99.083	Callithrix_jacchus
ENSCANG00000034659	TRMT13	65	92.038	ENSCAFG00000020021	TRMT13	99	92.038	Canis_familiaris
ENSCANG00000034659	TRMT13	100	88.182	ENSCAFG00020011572	TRMT13	95	92.000	Canis_lupus_dingo
ENSCANG00000034659	TRMT13	100	90.852	ENSCHIG00000015395	TRMT13	100	90.852	Capra_hircus
ENSCANG00000034659	TRMT13	98	82.875	ENSTSYG00000010811	TRMT13	98	87.879	Carlito_syrichta
ENSCANG00000034659	TRMT13	75	69.589	ENSCAPG00000009085	TRMT13	100	70.137	Cavia_aperea
ENSCANG00000034659	TRMT13	100	89.397	ENSCPOG00000000694	TRMT13	100	89.397	Cavia_porcellus
ENSCANG00000034659	TRMT13	100	98.165	ENSCCAG00000023772	TRMT13	100	98.165	Cebus_capucinus
ENSCANG00000034659	TRMT13	100	99.168	ENSCATG00000033556	TRMT13	100	99.168	Cercocebus_atys
ENSCANG00000034659	TRMT13	89	84.778	ENSCLAG00000008220	TRMT13	100	85.714	Chinchilla_lanigera
ENSCANG00000034659	TRMT13	100	99.792	ENSCSAG00000001506	TRMT13	100	99.792	Chlorocebus_sabaeus
ENSCANG00000034659	TRMT13	99	69.167	ENSCPBG00000026671	TRMT13	99	69.167	Chrysemys_picta_bellii
ENSCANG00000034659	TRMT13	99	85.655	ENSCGRG00001021601	Trmt13	99	85.655	Cricetulus_griseus_chok1gshd
ENSCANG00000034659	TRMT13	53	83.268	ENSCGRG00000000093	-	99	83.268	Cricetulus_griseus_crigri
ENSCANG00000034659	TRMT13	98	48.414	ENSCSEG00000000591	trmt13	99	48.414	Cynoglossus_semilaevis
ENSCANG00000034659	TRMT13	95	48.421	ENSCVAG00000017342	trmt13	93	49.684	Cyprinodon_variegatus
ENSCANG00000034659	TRMT13	95	57.974	ENSDARG00000102846	trmt13	96	57.974	Danio_rerio
ENSCANG00000034659	TRMT13	100	84.071	ENSDNOG00000001710	TRMT13	84	89.130	Dasypus_novemcinctus
ENSCANG00000034659	TRMT13	100	88.991	ENSDORG00000015808	Trmt13	99	87.942	Dipodomys_ordii
ENSCANG00000034659	TRMT13	95	31.027	FBgn0037435	CG18048	94	31.027	Drosophila_melanogaster
ENSCANG00000034659	TRMT13	99	85.714	ENSETEG00000005819	TRMT13	99	76.200	Echinops_telfairi
ENSCANG00000034659	TRMT13	95	45.591	ENSEBUG00000014444	trmt13	96	45.671	Eptatretus_burgeri
ENSCANG00000034659	TRMT13	100	95.413	ENSEASG00005015918	TRMT13	100	93.139	Equus_asinus_asinus
ENSCANG00000034659	TRMT13	100	95.413	ENSECAG00000022626	TRMT13	100	93.555	Equus_caballus
ENSCANG00000034659	TRMT13	96	85.714	ENSEEUG00000000294	TRMT13	80	81.646	Erinaceus_europaeus
ENSCANG00000034659	TRMT13	96	56.197	ENSELUG00000003803	trmt13	98	56.652	Esox_lucius
ENSCANG00000034659	TRMT13	100	93.578	ENSFCAG00000030618	TRMT13	100	93.578	Felis_catus
ENSCANG00000034659	TRMT13	100	66.055	ENSFALG00000002424	TRMT13	99	64.644	Ficedula_albicollis
ENSCANG00000034659	TRMT13	100	91.743	ENSFDAG00000006342	TRMT13	99	91.176	Fukomys_damarensis
ENSCANG00000034659	TRMT13	83	57.778	ENSFHEG00000022954	trmt13	97	51.122	Fundulus_heteroclitus
ENSCANG00000034659	TRMT13	95	49.011	ENSGMOG00000013223	trmt13	100	49.451	Gadus_morhua
ENSCANG00000034659	TRMT13	95	65.934	ENSGALG00000005290	TRMT13	98	65.180	Gallus_gallus
ENSCANG00000034659	TRMT13	85	56.383	ENSGAFG00000001577	trmt13	81	51.613	Gambusia_affinis
ENSCANG00000034659	TRMT13	89	59.794	ENSGACG00000013428	trmt13	100	50.209	Gasterosteus_aculeatus
ENSCANG00000034659	TRMT13	100	69.087	ENSGAGG00000023303	TRMT13	99	73.091	Gopherus_agassizii
ENSCANG00000034659	TRMT13	100	97.921	ENSGGOG00000005616	TRMT13	100	97.921	Gorilla_gorilla
ENSCANG00000034659	TRMT13	96	53.602	ENSHBUG00000007754	trmt13	99	53.602	Haplochromis_burtoni
ENSCANG00000034659	TRMT13	100	92.661	ENSHGLG00000002164	TRMT13	99	91.807	Heterocephalus_glaber_female
ENSCANG00000034659	TRMT13	100	92.661	ENSHGLG00100001618	TRMT13	99	91.807	Heterocephalus_glaber_male
ENSCANG00000034659	TRMT13	96	48.069	ENSHCOG00000020553	trmt13	98	47.639	Hippocampus_comes
ENSCANG00000034659	TRMT13	95	57.267	ENSIPUG00000024787	trmt13	98	58.225	Ictalurus_punctatus
ENSCANG00000034659	TRMT13	100	94.495	ENSSTOG00000013483	TRMT13	100	94.179	Ictidomys_tridecemlineatus
ENSCANG00000034659	TRMT13	99	88.866	ENSJJAG00000018012	Trmt13	100	88.333	Jaculus_jaculus
ENSCANG00000034659	TRMT13	64	50.479	ENSKMAG00000007639	trmt13	92	50.479	Kryptolebias_marmoratus
ENSCANG00000034659	TRMT13	87	64.211	ENSLBEG00000020238	trmt13	99	51.148	Labrus_bergylta
ENSCANG00000034659	TRMT13	96	62.500	ENSLACG00000013153	TRMT13	100	61.443	Latimeria_chalumnae
ENSCANG00000034659	TRMT13	95	64.423	ENSLOCG00000000418	trmt13	99	57.906	Lepisosteus_oculatus
ENSCANG00000034659	TRMT13	77	88.919	ENSLAFG00000002383	TRMT13	100	88.919	Loxodonta_africana
ENSCANG00000034659	TRMT13	100	100.000	ENSMFAG00000034681	TRMT13	100	100.000	Macaca_fascicularis
ENSCANG00000034659	TRMT13	100	100.000	ENSMMUG00000004243	TRMT13	100	100.000	Macaca_mulatta
ENSCANG00000034659	TRMT13	100	100.000	ENSMNEG00000036102	TRMT13	100	100.000	Macaca_nemestrina
ENSCANG00000034659	TRMT13	100	99.168	ENSMLEG00000034258	TRMT13	100	99.168	Mandrillus_leucophaeus
ENSCANG00000034659	TRMT13	96	51.688	ENSMAMG00000016597	trmt13	98	51.688	Mastacembelus_armatus
ENSCANG00000034659	TRMT13	96	53.178	ENSMZEG00005020959	trmt13	99	53.178	Maylandia_zebra
ENSCANG00000034659	TRMT13	89	66.745	ENSMGAG00000006970	TRMT13	100	66.745	Meleagris_gallopavo
ENSCANG00000034659	TRMT13	100	84.404	ENSMAUG00000010448	Trmt13	99	84.583	Mesocricetus_auratus
ENSCANG00000034659	TRMT13	100	94.179	ENSMICG00000005283	TRMT13	100	94.179	Microcebus_murinus
ENSCANG00000034659	TRMT13	100	84.404	ENSMOCG00000019914	Trmt13	99	82.083	Microtus_ochrogaster
ENSCANG00000034659	TRMT13	72	53.165	ENSMMOG00000007762	trmt13	89	50.943	Mola_mola
ENSCANG00000034659	TRMT13	100	76.991	ENSMODG00000003646	TRMT13	100	75.876	Monodelphis_domestica
ENSCANG00000034659	TRMT13	94	56.311	ENSMALG00000020965	trmt13	97	50.972	Monopterus_albus
ENSCANG00000034659	TRMT13	99	87.963	MGP_CAROLIEiJ_G0025568	Trmt13	94	92.262	Mus_caroli
ENSCANG00000034659	TRMT13	99	86.583	ENSMUSG00000033439	Trmt13	94	92.262	Mus_musculus
ENSCANG00000034659	TRMT13	99	87.421	MGP_PahariEiJ_G0027014	Trmt13	99	87.421	Mus_pahari
ENSCANG00000034659	TRMT13	99	87.037	MGP_SPRETEiJ_G0026518	Trmt13	94	92.262	Mus_spretus
ENSCANG00000034659	TRMT13	79	88.976	ENSMPUG00000002078	-	100	88.976	Mustela_putorius_furo
ENSCANG00000034659	TRMT13	100	90.826	ENSMPUG00000012169	-	98	89.474	Mustela_putorius_furo
ENSCANG00000034659	TRMT13	100	91.743	ENSMLUG00000002124	TRMT13	100	79.834	Myotis_lucifugus
ENSCANG00000034659	TRMT13	97	53.774	ENSNBRG00000006783	trmt13	97	49.266	Neolamprologus_brichardi
ENSCANG00000034659	TRMT13	100	98.545	ENSNLEG00000035917	TRMT13	100	98.545	Nomascus_leucogenys
ENSCANG00000034659	TRMT13	100	58.182	ENSMEUG00000013346	-	100	73.387	Notamacropus_eugenii
ENSCANG00000034659	TRMT13	100	88.073	ENSOPRG00000012048	TRMT13	67	90.809	Ochotona_princeps
ENSCANG00000034659	TRMT13	100	89.908	ENSODEG00000006075	-	95	90.419	Octodon_degus
ENSCANG00000034659	TRMT13	96	53.390	ENSONIG00000004574	trmt13	99	53.390	Oreochromis_niloticus
ENSCANG00000034659	TRMT13	89	74.710	ENSOANG00000012057	TRMT13	99	74.710	Ornithorhynchus_anatinus
ENSCANG00000034659	TRMT13	100	92.516	ENSOCUG00000023095	TRMT13	100	92.516	Oryctolagus_cuniculus
ENSCANG00000034659	TRMT13	96	48.729	ENSORLG00000003320	trmt13	99	49.364	Oryzias_latipes
ENSCANG00000034659	TRMT13	95	48.394	ENSORLG00020005972	trmt13	97	48.637	Oryzias_latipes_hni
ENSCANG00000034659	TRMT13	96	52.654	ENSORLG00015002270	trmt13	99	52.654	Oryzias_latipes_hsok
ENSCANG00000034659	TRMT13	97	51.374	ENSOMEG00000006724	trmt13	94	52.340	Oryzias_melastigma
ENSCANG00000034659	TRMT13	100	92.661	ENSOGAG00000005618	TRMT13	97	92.308	Otolemur_garnettii
ENSCANG00000034659	TRMT13	100	90.852	ENSOARG00000017983	TRMT13	100	90.852	Ovis_aries
ENSCANG00000034659	TRMT13	100	97.921	ENSPPAG00000043736	TRMT13	100	97.921	Pan_paniscus
ENSCANG00000034659	TRMT13	100	93.578	ENSPPRG00000003424	TRMT13	100	93.578	Panthera_pardus
ENSCANG00000034659	TRMT13	100	93.578	ENSPTIG00000018598	TRMT13	100	93.578	Panthera_tigris_altaica
ENSCANG00000034659	TRMT13	100	97.921	ENSPTRG00000001001	TRMT13	100	97.921	Pan_troglodytes
ENSCANG00000034659	TRMT13	100	100.000	ENSPANG00000007598	TRMT13	100	100.000	Papio_anubis
ENSCANG00000034659	TRMT13	96	56.739	ENSPKIG00000001514	trmt13	98	56.739	Paramormyrops_kingsleyae
ENSCANG00000034659	TRMT13	86	69.305	ENSPSIG00000012703	TRMT13	99	69.305	Pelodiscus_sinensis
ENSCANG00000034659	TRMT13	85	64.516	ENSPMGG00000013298	trmt13	94	51.820	Periophthalmus_magnuspinnatus
ENSCANG00000034659	TRMT13	100	84.404	ENSPEMG00000000275	Trmt13	99	83.958	Peromyscus_maniculatus_bairdii
ENSCANG00000034659	TRMT13	88	55.000	ENSPMAG00000000823	trmt13	97	45.816	Petromyzon_marinus
ENSCANG00000034659	TRMT13	99	76.091	ENSPCIG00000007699	TRMT13	99	76.715	Phascolarctos_cinereus
ENSCANG00000034659	TRMT13	99	49.375	ENSPFOG00000008675	trmt13	99	49.375	Poecilia_formosa
ENSCANG00000034659	TRMT13	95	49.469	ENSPLAG00000009709	trmt13	99	49.469	Poecilia_latipinna
ENSCANG00000034659	TRMT13	95	47.863	ENSPMEG00000022954	trmt13	99	47.863	Poecilia_mexicana
ENSCANG00000034659	TRMT13	88	56.000	ENSPREG00000005645	trmt13	91	50.719	Poecilia_reticulata
ENSCANG00000034659	TRMT13	100	98.129	ENSPPYG00000001120	TRMT13	100	98.129	Pongo_abelii
ENSCANG00000034659	TRMT13	100	88.565	ENSPCAG00000002340	TRMT13	100	88.565	Procavia_capensis
ENSCANG00000034659	TRMT13	100	93.578	ENSPCOG00000017984	TRMT13	100	93.578	Propithecus_coquereli
ENSCANG00000034659	TRMT13	100	92.100	ENSPVAG00000017430	TRMT13	100	92.100	Pteropus_vampyrus
ENSCANG00000034659	TRMT13	96	51.907	ENSPNYG00000013690	trmt13	99	51.907	Pundamilia_nyererei
ENSCANG00000034659	TRMT13	94	65.049	ENSPNAG00000022130	trmt13	99	55.814	Pygocentrus_nattereri
ENSCANG00000034659	TRMT13	100	85.321	ENSRNOG00000015140	Trmt13	96	86.192	Rattus_norvegicus
ENSCANG00000034659	TRMT13	100	100.000	ENSRBIG00000037686	TRMT13	100	100.000	Rhinopithecus_bieti
ENSCANG00000034659	TRMT13	100	100.000	ENSRROG00000044057	TRMT13	100	100.000	Rhinopithecus_roxellana
ENSCANG00000034659	TRMT13	100	99.083	ENSSBOG00000026541	TRMT13	100	99.083	Saimiri_boliviensis_boliviensis
ENSCANG00000034659	TRMT13	91	77.117	ENSSHAG00000005213	TRMT13	97	77.117	Sarcophilus_harrisii
ENSCANG00000034659	TRMT13	96	54.839	ENSSFOG00015017560	trmt13	98	54.839	Scleropages_formosus
ENSCANG00000034659	TRMT13	94	58.824	ENSSMAG00000014592	trmt13	99	50.511	Scophthalmus_maximus
ENSCANG00000034659	TRMT13	98	56.481	ENSSDUG00000015508	trmt13	99	50.505	Seriola_dumerili
ENSCANG00000034659	TRMT13	98	56.481	ENSSLDG00000019060	trmt13	98	50.513	Seriola_lalandi_dorsalis
ENSCANG00000034659	TRMT13	97	85.849	ENSSARG00000010344	TRMT13	99	76.421	Sorex_araneus
ENSCANG00000034659	TRMT13	96	68.035	ENSSPUG00000016339	TRMT13	100	68.035	Sphenodon_punctatus
ENSCANG00000034659	TRMT13	95	52.258	ENSSPAG00000011922	trmt13	98	52.340	Stegastes_partitus
ENSCANG00000034659	TRMT13	100	92.661	ENSSSCG00000006869	TRMT13	100	91.684	Sus_scrofa
ENSCANG00000034659	TRMT13	97	66.239	ENSTGUG00000005253	TRMT13	100	66.239	Taeniopygia_guttata
ENSCANG00000034659	TRMT13	90	55.102	ENSTRUG00000008400	trmt13	99	49.684	Takifugu_rubripes
ENSCANG00000034659	TRMT13	86	76.442	ENSTBEG00000008911	TRMT13	100	76.442	Tupaia_belangeri
ENSCANG00000034659	TRMT13	70	98.684	ENSTTRG00000015302	-	60	98.684	Tursiops_truncatus
ENSCANG00000034659	TRMT13	100	89.908	ENSUAMG00000017251	TRMT13	100	85.447	Ursus_americanus
ENSCANG00000034659	TRMT13	100	91.743	ENSUMAG00000007901	TRMT13	100	90.644	Ursus_maritimus
ENSCANG00000034659	TRMT13	90	73.843	ENSVPAG00000001034	TRMT13	100	73.843	Vicugna_pacos
ENSCANG00000034659	TRMT13	99	91.684	ENSVVUG00000021996	TRMT13	99	91.684	Vulpes_vulpes
ENSCANG00000034659	TRMT13	91	65.657	ENSXETG00000013204	trmt13	96	56.156	Xenopus_tropicalis
ENSCANG00000034659	TRMT13	87	56.250	ENSXCOG00000008120	-	88	56.250	Xiphophorus_couchianus
ENSCANG00000034659	TRMT13	95	48.517	ENSXMAG00000010765	trmt13	99	48.517	Xiphophorus_maculatus